RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 PPT1P50897 306 aa9.7□□□□□ -0.86
VARS-225ENST00000482996 TREM1Q9NP99 234 aa9.7□□□□□ -0.86
VARS-225ENST00000482996 TRAV8-1A0A0A6YYK1 113 aa9.69□□□□□ -0.86
VARS-225ENST00000482996 TRAV21A0A0B4J279 112 aa9.69□□□□□ -0.86
VARS-225ENST00000482996 H3BNG1 76 aa9.69□□□□□ -0.86
VARS-225ENST00000482996 TMEM183BQ1AE95 376 aa9.69□□□□□ -0.86
VARS-225ENST00000482996 COMMD7Q86VX2 200 aa9.69□□□□□ -0.86
VARS-225ENST00000482996 TMEM183AQ8IXX5 376 aa9.69□□□□□ -0.86
VARS-225ENST00000482996 MUC4Q99102 2169 aa9.69□□□□□ -0.86
VARS-225ENST00000482996 MRPL16Q9NX20 251 aaKnown RBP9.69□□□□□ -0.86
VARS-225ENST00000482996 NAGKQ9UJ70 344 aa9.69□□□□□ -0.86
VARS-225ENST00000482996 HECTD4Q9Y4D8 3996 aa9.69□□□□□ -0.86
VARS-225ENST00000482996 NACAE9PAV3 2078 aa9.68□□□□□ -0.86
VARS-225ENST00000482996 TCRAP04437 139 aa9.68□□□□□ -0.86
VARS-225ENST00000482996 SUMO1P63165 101 aaKnown RBP9.68□□□□□ -0.86
VARS-225ENST00000482996 SOHLH1Q5JUK2 328 aa9.68□□□□□ -0.86
VARS-225ENST00000482996 Q6ZR54 194 aa9.68□□□□□ -0.86
VARS-225ENST00000482996 MBD3L1Q8WWY6 194 aa9.68□□□□□ -0.86
VARS-225ENST00000482996 SPXQ9BT56 116 aa9.68□□□□□ -0.86
VARS-225ENST00000482996 TRAV1-1A0A0B4J248 108 aa9.67□□□□□ -0.86
VARS-225ENST00000482996 A0A1W2PRE2 83 aa9.67□□□□□ -0.86
VARS-225ENST00000482996 FBLL1A6NHQ2 334 aaKnown RBP9.67□□□□□ -0.86
VARS-225ENST00000482996 F6UZH7 168 aa9.67□□□□□ -0.86
VARS-225ENST00000482996 TAGLN2P37802 199 aaKnown RBP9.67□□□□□ -0.86
VARS-225ENST00000482996 FGF8P55075 233 aaPredicted RBP9.67□□□□□ -0.86
VARS-225ENST00000482996 TDRG1Q3Y452 100 aa9.67□□□□□ -0.86
VARS-225ENST00000482996 SSX7Q7RTT5 188 aa9.67□□□□□ -0.86
VARS-225ENST00000482996 MANBALQ9NQG1 85 aa9.67□□□□□ -0.86
VARS-225ENST00000482996 MDFICQ9P1T7 246 aa9.67□□□□□ -0.86
VARS-225ENST00000482996 EPDR1Q9UM22 224 aa9.67□□□□□ -0.86
VARS-225ENST00000482996 LINC00588Q9Y4M8 146 aa9.67□□□□□ -0.86
VARS-225ENST00000482996 LINC00862A6NCI5 91 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 GGTLC3B5MD39 225 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 IGHV3-53P01767 116 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 SLAQ13239 276 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 ZNF726P1Q15940 193 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 CYB561D1Q8N8Q1 229 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 ZNRF2Q8NHG8 242 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 TVP23CQ96ET8 276 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 KCNS1Q96KK3 526 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 SGK494Q96LW2 274 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 EIF5A2Q9GZV4 153 aaKnown RBP9.66□□□□□ -0.86
VARS-225ENST00000482996 SDF2L1Q9HCN8 221 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 GNG13Q9P2W3 67 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 PSG8Q9UQ74 426 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 FAT2Q9NYQ8 4349 aa9.66□□□□□ -0.86
VARS-225ENST00000482996 PRSS29PA6NIE9 313 aa9.65□□□□□ -0.86
VARS-225ENST00000482996 RTL8CO15255 209 aa9.65□□□□□ -0.86
VARS-225ENST00000482996 PAX4O43316 350 aa9.65□□□□□ -0.86
VARS-225ENST00000482996 FLI1Q01543 452 aaPredicted RBP9.65□□□□□ -0.86
VARS-225ENST00000482996 TOR2AQ5JU69 321 aa9.65□□□□□ -0.86
VARS-225ENST00000482996 C1orf134Q5TEV5 83 aa9.65□□□□□ -0.86
VARS-225ENST00000482996 NKX6-2Q9C056 277 aaPredicted RBP9.65□□□□□ -0.86
VARS-225ENST00000482996 MED9Q9NWA0 146 aa9.65□□□□□ -0.86
VARS-225ENST00000482996 NBDYA0A0U1RRE5 68 aa9.64□□□□□ -0.87
VARS-225ENST00000482996 RAB19A4D1S5 217 aa9.64□□□□□ -0.87
VARS-225ENST00000482996 PEA15Q15121 130 aa9.64□□□□□ -0.87
VARS-225ENST00000482996 SMUG1Q53HV7 270 aa9.64□□□□□ -0.87
VARS-225ENST00000482996 PRNTQ86SH4 94 aa9.64□□□□□ -0.87
VARS-225ENST00000482996 TMEM75Q8N9X5 138 aa9.64□□□□□ -0.87
VARS-225ENST00000482996 RASL10AQ92737 203 aa9.64□□□□□ -0.87
VARS-225ENST00000482996 VSIG2Q96IQ7 327 aa9.64□□□□□ -0.87
VARS-225ENST00000482996 PRO0255Q9UI72 69 aa9.64□□□□□ -0.87
VARS-225ENST00000482996 A0A096LPF7 62 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 TRGV4A0A0C4DH28 118 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 IGHV3-16A0A0C4DH30 117 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 M0R2P5 195 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 GNRH2O43555 120 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 GCGP01275 180 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 UBE2G2P60604 165 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 ESRGQ1W209 222 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 SAPCD1Q5SSQ6 148 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 UQCC3Q6UW78 93 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 LYPD6BQ8NI32 183 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 FAM210AQ96ND0 272 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 C8orf49Q96NF6 230 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 HHLA3Q9XRX5 114 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 ICOSQ9Y6W8 199 aa9.63□□□□□ -0.87
VARS-225ENST00000482996 RBFOX3A6NFN3 312 aa9.62□□□□□ -0.87
VARS-225ENST00000482996 IGLV2-11P01706 119 aa9.62□□□□□ -0.87
VARS-225ENST00000482996 TYMSP04818 313 aa9.62□□□□□ -0.87
VARS-225ENST00000482996 BCL2P10415 239 aa9.62□□□□□ -0.87
VARS-225ENST00000482996 FHL2Q14192 279 aa9.62□□□□□ -0.87
VARS-225ENST00000482996 CST9LP1Q5W188 147 aa9.62□□□□□ -0.87
VARS-225ENST00000482996 Q9H8V8 135 aa9.62□□□□□ -0.87
VARS-225ENST00000482996 MRPS16Q9Y3D3 137 aaKnown RBP9.62□□□□□ -0.87
VARS-225ENST00000482996 FAM74A7A6NL05 159 aa9.61□□□□□ -0.87
VARS-225ENST00000482996 PEX7O00628 323 aa9.61□□□□□ -0.87
VARS-225ENST00000482996 PFN1P07737 140 aaKnown RBP9.61□□□□□ -0.87
VARS-225ENST00000482996 CRYBA4P53673 196 aa9.61□□□□□ -0.87
VARS-225ENST00000482996 TTC32Q5I0X7 151 aa9.61□□□□□ -0.87
VARS-225ENST00000482996 SLC7A5P1Q8MH63 180 aa9.61□□□□□ -0.87
VARS-225ENST00000482996 HIST1H2BAQ96A08 127 aa9.61□□□□□ -0.87
VARS-225ENST00000482996 TXNDC17Q9BRA2 123 aa9.61□□□□□ -0.87
VARS-225ENST00000482996 UPK3BQ9BT76 320 aa9.61□□□□□ -0.87
VARS-225ENST00000482996 SMDT1Q9H4I9 107 aa9.61□□□□□ -0.87
VARS-225ENST00000482996 VAX2Q9UIW0 290 aa9.61□□□□□ -0.87
VARS-225ENST00000482996 ARL2-SNX15V9GYD0 113 aa9.61□□□□□ -0.87
VARS-225ENST00000482996 TRAV4A0A0B4J268 109 aa9.6□□□□□ -0.87
VARS-225ENST00000482996 TRAV34A0A0B4J273 112 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms