RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 USP9XQ93008 2570 aaPredicted RBP9.85□□□□□ -0.83
VPS52-218ENST00000482399 IGLV11-55A0A075B6I3 123 aa9.85□□□□□ -0.83
VPS52-218ENST00000482399 ATP6V0E1O15342 81 aa9.85□□□□□ -0.83
VPS52-218ENST00000482399 Q1RN00 199 aa9.85□□□□□ -0.83
VPS52-218ENST00000482399 PIP4P1Q86T03 277 aa9.85□□□□□ -0.83
VPS52-218ENST00000482399 WI2-2373I1.2A0A1W2PRP0 233 aa9.85□□□□□ -0.83
VPS52-218ENST00000482399 CEACAM4O75871 244 aa9.85□□□□□ -0.83
VPS52-218ENST00000482399 C12orf74Q32Q52 190 aa9.85□□□□□ -0.83
VPS52-218ENST00000482399 UFSP1Q6NVU6 142 aa9.85□□□□□ -0.83
VPS52-218ENST00000482399 F6UB75 175 aa9.84□□□□□ -0.83
VPS52-218ENST00000482399 IGF1P05019 195 aa9.84□□□□□ -0.83
VPS52-218ENST00000482399 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.84□□□□□ -0.83
VPS52-218ENST00000482399 KLHL30-AS1Q8NEE0 82 aa9.84□□□□□ -0.83
VPS52-218ENST00000482399 RPL39LQ96EH5 51 aaKnown RBP9.84□□□□□ -0.83
VPS52-218ENST00000482399 BEX4Q9NWD9 120 aaPredicted RBP9.84□□□□□ -0.83
VPS52-218ENST00000482399 SMAD5-AS1Q9Y6J3 95 aa9.84□□□□□ -0.83
VPS52-218ENST00000482399 GAGE12HA6NDE8 117 aa9.84□□□□□ -0.83
VPS52-218ENST00000482399 LINC01548A6NM66 108 aa9.84□□□□□ -0.83
VPS52-218ENST00000482399 RNF185Q96GF1 192 aa9.84□□□□□ -0.83
VPS52-218ENST00000482399 IGKV3D-20A0A0C4DH25 116 aa9.83□□□□□ -0.84
VPS52-218ENST00000482399 IGLL5B9A064 214 aa9.83□□□□□ -0.84
VPS52-218ENST00000482399 HOXA3O43365 443 aaPredicted RBP9.83□□□□□ -0.84
VPS52-218ENST00000482399 Q8N8P6 123 aa9.83□□□□□ -0.84
VPS52-218ENST00000482399 ZNF256Q9Y2P7 627 aaPredicted RBP9.83□□□□□ -0.84
VPS52-218ENST00000482399 LINC01549A6NIU2 74 aa9.83□□□□□ -0.84
VPS52-218ENST00000482399 HLA-DRB4P13762 266 aa9.83□□□□□ -0.84
VPS52-218ENST00000482399 HLA-DRB4X5D2U9 266 aa9.83□□□□□ -0.84
VPS52-218ENST00000482399 SIVA1O15304 175 aa9.82□□□□□ -0.84
VPS52-218ENST00000482399 INSL3P51460 131 aa9.82□□□□□ -0.84
VPS52-218ENST00000482399 OR10J6PQ8NGY7 276 aa9.82□□□□□ -0.84
VPS52-218ENST00000482399 DPF1Q92782 380 aa9.82□□□□□ -0.84
VPS52-218ENST00000482399 RNF5Q99942 180 aa9.82□□□□□ -0.84
VPS52-218ENST00000482399 C11orf21Q9P2W6 132 aa9.82□□□□□ -0.84
VPS52-218ENST00000482399 CENPEQ02224 2701 aa9.82□□□□□ -0.84
VPS52-218ENST00000482399 PF4V1P10720 104 aa9.82□□□□□ -0.84
VPS52-218ENST00000482399 SLC25A16P16260 332 aa9.82□□□□□ -0.84
VPS52-218ENST00000482399 C8orf86Q6ZUL3 223 aa9.82□□□□□ -0.84
VPS52-218ENST00000482399 SVIPQ8NHG7 77 aa9.82□□□□□ -0.84
VPS52-218ENST00000482399 SONP18583 2426 aaKnown RBP9.82□□□□□ -0.84
VPS52-218ENST00000482399 POLQO75417 2590 aa9.82□□□□□ -0.84
VPS52-218ENST00000482399 A0A087WWL8 130 aa9.81□□□□□ -0.84
VPS52-218ENST00000482399 IGHV7-81A0A0B4J1V7 117 aa9.81□□□□□ -0.84
VPS52-218ENST00000482399 MRPS12O15235 138 aaKnown RBP9.81□□□□□ -0.84
VPS52-218ENST00000482399 IGLC6P0CF74 106 aa9.81□□□□□ -0.84
VPS52-218ENST00000482399 PRTN3P24158 256 aa9.81□□□□□ -0.84
VPS52-218ENST00000482399 BRD3OSQ6XYD6 125 aa9.81□□□□□ -0.84
VPS52-218ENST00000482399 PTH2Q96A98 100 aa9.81□□□□□ -0.84
VPS52-218ENST00000482399 PRADC1Q9BSG0 188 aa9.81□□□□□ -0.84
VPS52-218ENST00000482399 HHLA3Q9XRX5 114 aa9.81□□□□□ -0.84
VPS52-218ENST00000482399 HOXB4P17483 251 aaPredicted RBP9.81□□□□□ -0.84
VPS52-218ENST00000482399 EEF1AKMT3Q96AZ1 226 aa9.81□□□□□ -0.84
VPS52-218ENST00000482399 H7C1H1 209 aa9.8□□□□□ -0.84
VPS52-218ENST00000482399 NDUFS8O00217 210 aa9.8□□□□□ -0.84
VPS52-218ENST00000482399 TNFRSF13BO14836 293 aaPredicted RBP9.8□□□□□ -0.84
VPS52-218ENST00000482399 C2orf66Q6UXQ4 117 aa9.8□□□□□ -0.84
VPS52-218ENST00000482399 BUB3O43684 328 aa9.8□□□□□ -0.84
VPS52-218ENST00000482399 SAA4P35542 130 aa9.8□□□□□ -0.84
VPS52-218ENST00000482399 ASIPP42127 132 aa9.8□□□□□ -0.84
VPS52-218ENST00000482399 SLC50A1Q9BRV3 221 aa9.8□□□□□ -0.84
VPS52-218ENST00000482399 GNRH2O43555 120 aa9.79□□□□□ -0.84
VPS52-218ENST00000482399 FOXI2Q6ZQN5 318 aa9.79□□□□□ -0.84
VPS52-218ENST00000482399 Q8NA96 180 aa9.79□□□□□ -0.84
VPS52-218ENST00000482399 SMPXQ9UHP9 88 aa9.79□□□□□ -0.84
VPS52-218ENST00000482399 U3KQK5 164 aa9.79□□□□□ -0.84
VPS52-218ENST00000482399 SUMO2P61956 95 aaKnown RBP9.79□□□□□ -0.84
VPS52-218ENST00000482399 RAX2Q96IS3 184 aa9.79□□□□□ -0.84
VPS52-218ENST00000482399 A0A087WX48 190 aa9.79□□□□□ -0.84
VPS52-218ENST00000482399 A0A1B0GV72 72 aa9.79□□□□□ -0.84
VPS52-218ENST00000482399 PRSS2P07478 247 aa9.79□□□□□ -0.84
VPS52-218ENST00000482399 SYT8Q8NBV8 401 aa9.79□□□□□ -0.84
VPS52-218ENST00000482399 SPAG8Q99932 426 aaPredicted RBP9.79□□□□□ -0.84
VPS52-218ENST00000482399 C20orf78Q9BR46 151 aa9.79□□□□□ -0.84
VPS52-218ENST00000482399 SRSF8Q9BRL6 282 aaKnown RBP9.79□□□□□ -0.84
VPS52-218ENST00000482399 TRBV6-1A0A0K0K1D8 114 aa9.78□□□□□ -0.84
VPS52-218ENST00000482399 F8VRH5 84 aa9.78□□□□□ -0.84
VPS52-218ENST00000482399 F8W735 103 aaPredicted RBP9.78□□□□□ -0.84
VPS52-218ENST00000482399 PLNP26678 52 aa9.78□□□□□ -0.84
VPS52-218ENST00000482399 SMIM2Q9BVW6 85 aa9.78□□□□□ -0.84
VPS52-218ENST00000482399 MYMXA0A1B0GTQ4 84 aa9.78□□□□□ -0.84
VPS52-218ENST00000482399 TMEM238LA0A1B0GVL6 79 aa9.77□□□□□ -0.84
VPS52-218ENST00000482399 A6NJY4 79 aa9.77□□□□□ -0.84
VPS52-218ENST00000482399 ZFP36P26651 326 aaKnown RBP9.77□□□□□ -0.84
VPS52-218ENST00000482399 CKS1BP61024 79 aa9.77□□□□□ -0.84
VPS52-218ENST00000482399 PAX8Q06710 450 aa9.77□□□□□ -0.84
VPS52-218ENST00000482399 ANXA2RQ3ZCQ2 193 aa9.77□□□□□ -0.85
VPS52-218ENST00000482399 DCHS2Q6V1P9 2916 aa9.77□□□□□ -0.85
VPS52-218ENST00000482399 CCDC168Q8NDH2 2452 aa9.77□□□□□ -0.85
VPS52-218ENST00000482399 PRSS29PA6NIE9 313 aa9.77□□□□□ -0.85
VPS52-218ENST00000482399 LY6LH3BQJ8 138 aa9.77□□□□□ -0.85
VPS52-218ENST00000482399 HERVK_113P61574 105 aa9.77□□□□□ -0.85
VPS52-218ENST00000482399 RRN3P1Q2M238 152 aa9.76□□□□□ -0.85
VPS52-218ENST00000482399 ORMDL2Q53FV1 153 aa9.76□□□□□ -0.85
VPS52-218ENST00000482399 F8W1H4 67 aa9.76□□□□□ -0.85
VPS52-218ENST00000482399 OVOL3O00110 214 aa9.76□□□□□ -0.85
VPS52-218ENST00000482399 IGHG4P01861 327 aa9.76□□□□□ -0.85
VPS52-218ENST00000482399 RAB9AP51151 201 aa9.76□□□□□ -0.85
VPS52-218ENST00000482399 ZNF56Q15929 161 aa9.76□□□□□ -0.85
VPS52-218ENST00000482399 Q8N9W7 124 aa9.76□□□□□ -0.85
VPS52-218ENST00000482399 JPT2Q9H910 190 aa9.76□□□□□ -0.85
VPS52-218ENST00000482399 CD7P09564 240 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms