RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 BOD1L2Q8IYS8 172 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 CCL19Q99731 98 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 SLC50A1Q9BRV3 221 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 KLK9Q9UKQ9 250 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 LRRK2Q5S007 2527 aa8.23□□□□□ -1.09
VPS52-217ENST00000478934 TMEM190Q8WZ59 177 aa8.22□□□□□ -1.09
VPS52-217ENST00000478934 PPP1R14DQ9NXH3 145 aa8.22□□□□□ -1.09
VPS52-217ENST00000478934 A1L4Q6 167 aa8.22□□□□□ -1.09
VPS52-217ENST00000478934 PF4V1P10720 104 aa8.22□□□□□ -1.09
VPS52-217ENST00000478934 ATP5J2P56134 94 aa8.22□□□□□ -1.09
VPS52-217ENST00000478934 ARL6IP6Q8N6S5 226 aa8.22□□□□□ -1.09
VPS52-217ENST00000478934 SPOCK3Q9BQ16 436 aa8.22□□□□□ -1.09
VPS52-217ENST00000478934 CNFNQ9BYD5 112 aa8.22□□□□□ -1.09
VPS52-217ENST00000478934 CST9LQ9H4G1 147 aa8.22□□□□□ -1.09
VPS52-217ENST00000478934 GAGE12BA1L429 117 aa8.21□□□□□ -1.09
VPS52-217ENST00000478934 SPANXN1Q5VSR9 72 aa8.21□□□□□ -1.09
VPS52-217ENST00000478934 C10orf99Q6UWK7 81 aa8.21□□□□□ -1.09
VPS52-217ENST00000478934 MAPK1IP1LQ8NDC0 245 aa8.21□□□□□ -1.09
VPS52-217ENST00000478934 C10orf105Q8TEF2 133 aa8.21□□□□□ -1.09
VPS52-217ENST00000478934 RBAKDNA6NC62 111 aa8.21□□□□□ -1.1
VPS52-217ENST00000478934 RAB9AP51151 201 aa8.21□□□□□ -1.1
VPS52-217ENST00000478934 ODF1Q14990 250 aa8.21□□□□□ -1.1
VPS52-217ENST00000478934 ADAMTSL5Q6ZMM2 481 aa8.21□□□□□ -1.1
VPS52-217ENST00000478934 PIMREGQ9BSJ6 248 aa8.21□□□□□ -1.1
VPS52-217ENST00000478934 TMEM160Q9NX00 188 aa8.21□□□□□ -1.1
VPS52-217ENST00000478934 ABCA12Q86UK0 2595 aa8.21□□□□□ -1.1
VPS52-217ENST00000478934 ZNF462Q96JM2 2506 aa8.2□□□□□ -1.1
VPS52-217ENST00000478934 K7ERJ3 54 aa8.2□□□□□ -1.1
VPS52-217ENST00000478934 M0R381 172 aa8.2□□□□□ -1.1
VPS52-217ENST00000478934 SAP30O75446 220 aa8.2□□□□□ -1.1
VPS52-217ENST00000478934 GCSHP23434 173 aa8.2□□□□□ -1.1
VPS52-217ENST00000478934 FCER1GP30273 86 aa8.2□□□□□ -1.1
VPS52-217ENST00000478934 C9orf47Q6ZRZ4 202 aa8.2□□□□□ -1.1
VPS52-217ENST00000478934 OR2K2Q8NGT1 345 aa8.2□□□□□ -1.1
VPS52-217ENST00000478934 PEF1Q9UBV8 284 aaKnown RBP8.2□□□□□ -1.1
VPS52-217ENST00000478934 HHLA3Q9XRX5 114 aa8.2□□□□□ -1.1
VPS52-217ENST00000478934 TMEM8BA6NDV4 472 aa8.19□□□□□ -1.1
VPS52-217ENST00000478934 GAGE10A6NGK3 116 aa8.19□□□□□ -1.1
VPS52-217ENST00000478934 SRSF2Q01130 221 aaKnown RBP8.19□□□□□ -1.1
VPS52-217ENST00000478934 OR4X2Q8NGF9 303 aa8.19□□□□□ -1.1
VPS52-217ENST00000478934 CREBBPQ92793 2442 aa8.19□□□□□ -1.1
VPS52-217ENST00000478934 SMIM17P0DL12 118 aa8.19□□□□□ -1.1
VPS52-217ENST00000478934 OCIAD2Q56VL3 154 aa8.19□□□□□ -1.1
VPS52-217ENST00000478934 ZC2HC1BQ5TFG8 222 aa8.19□□□□□ -1.1
VPS52-217ENST00000478934 MUC4Q99102 2169 aa8.19□□□□□ -1.1
VPS52-217ENST00000478934 IGLV2-18A0A075B6J9 118 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 FAM223BA6NKX1 122 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 GNRH2O43555 120 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 S100A7P31151 101 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 FXYD2P54710 66 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 FAM223AQ8IWN6 122 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 ZFAND2AQ8N6M9 145 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 NRACQ8N912 160 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 OR1N2Q8NGR9 330 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 AP1S3Q96PC3 154 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 MEGF9Q9H1U4 602 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 HIF1ANQ9NWT6 349 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 MRPL35Q9NZE8 188 aaKnown RBP8.18□□□□□ -1.1
VPS52-217ENST00000478934 PTPN13Q12923 2485 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 A6NDX4 124 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 RNASE4P34096 147 aaKnown RBP8.18□□□□□ -1.1
VPS52-217ENST00000478934 VPS25Q9BRG1 176 aa8.18□□□□□ -1.1
VPS52-217ENST00000478934 NXT2Q9NPJ8 142 aaKnown RBP8.18□□□□□ -1.1
VPS52-217ENST00000478934 ANKRD17O75179 2603 aaKnown RBP8.18□□□□□ -1.1
VPS52-217ENST00000478934 A0A0G2JLM5 398 aa8.17□□□□□ -1.1
VPS52-217ENST00000478934 SOCS3O14543 225 aa8.17□□□□□ -1.1
VPS52-217ENST00000478934 IGKCP01834 107 aa8.17□□□□□ -1.1
VPS52-217ENST00000478934 IGHG2P01859 326 aa8.17□□□□□ -1.1
VPS52-217ENST00000478934 PPBPP02775 128 aa8.17□□□□□ -1.1
VPS52-217ENST00000478934 SEC11AP67812 179 aa8.17□□□□□ -1.1
VPS52-217ENST00000478934 CLEC2AQ6UVW9 174 aa8.17□□□□□ -1.1
VPS52-217ENST00000478934 RPL39LQ96EH5 51 aaKnown RBP8.17□□□□□ -1.1
VPS52-217ENST00000478934 HSD52Q0P140 79 aa8.17□□□□□ -1.1
VPS52-217ENST00000478934 NEGR1Q7Z3B1 354 aa8.17□□□□□ -1.1
VPS52-217ENST00000478934 C14orf178Q8N769 122 aaPredicted RBP8.17□□□□□ -1.1
VPS52-217ENST00000478934 MAPKAPK5-AS1Q8N8E1 139 aa8.17□□□□□ -1.1
VPS52-217ENST00000478934 RHPN1-AS1Q9BWJ2 59 aa8.17□□□□□ -1.1
VPS52-217ENST00000478934 TEX15Q9BXT5 2789 aa8.17□□□□□ -1.1
VPS52-217ENST00000478934 A6NDN8 102 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 C9orf118A6NHY6 69 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 MSMBP08118 114 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 CDKN1BP46527 198 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 ANXA2RQ3ZCQ2 193 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 Q8N8P6 123 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 NPFFR1Q9GZQ6 430 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 NDUFA4O00483 81 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 PRB1P04280 392 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 IGHV4-59P01825 116 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 MGPP08493 103 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 CRIP2P52943 208 aaPredicted RBP8.16□□□□□ -1.1
VPS52-217ENST00000478934 LAGE3Q14657 143 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 C9orf139Q6ZV77 190 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 SMIM15Q7Z3B0 74 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 OR9G4Q8NGQ1 327 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 DPF1Q92782 380 aa8.16□□□□□ -1.1
VPS52-217ENST00000478934 TLN2Q9Y4G6 2542 aa8.15□□□□□ -1.1
VPS52-217ENST00000478934 USP24Q9UPU5 2620 aa8.15□□□□□ -1.1
VPS52-217ENST00000478934 TRBV25-1A0A075B6N4 114 aa8.15□□□□□ -1.1
VPS52-217ENST00000478934 H3BRM9 83 aa8.15□□□□□ -1.1
VPS52-217ENST00000478934 S100A4P26447 101 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms