RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 TYMSP04818 313 aa8.93□□□□□ -0.98
VCL-205ENST00000478896 PET100P0DJ07 73 aa8.93□□□□□ -0.98
VCL-205ENST00000478896 ASAH1Q13510 395 aa8.93□□□□□ -0.98
VCL-205ENST00000478896 TDRG1Q3Y452 100 aa8.93□□□□□ -0.98
VCL-205ENST00000478896 GOLT1AQ6ZVE7 132 aa8.93□□□□□ -0.98
VCL-205ENST00000478896 SMIM3Q9BZL3 60 aa8.93□□□□□ -0.98
VCL-205ENST00000478896 OTORQ9NRC9 128 aa8.93□□□□□ -0.98
VCL-205ENST00000478896 FAM229AH3BQW9 127 aa8.92□□□□□ -0.98
VCL-205ENST00000478896 EIF3GO75821 320 aaKnown RBP eCLIP8.92□□□□□ -0.98
VCL-205ENST00000478896 OR10J3Q5JRS4 329 aa8.92□□□□□ -0.98
VCL-205ENST00000478896 PPP1R1CQ8WVI7 109 aa8.92□□□□□ -0.98
VCL-205ENST00000478896 Q9HAA7 133 aa8.92□□□□□ -0.98
VCL-205ENST00000478896 TREM1Q9NP99 234 aa8.92□□□□□ -0.98
VCL-205ENST00000478896 MBD2Q9UBB5 411 aa8.92□□□□□ -0.98
VCL-205ENST00000478896 HSPB11Q9Y547 144 aa8.92□□□□□ -0.98
VCL-205ENST00000478896 TRAV8-6A0A0B4J262 113 aa8.91□□□□□ -0.98
VCL-205ENST00000478896 A0A1W2PPV4 95 aa8.91□□□□□ -0.98
VCL-205ENST00000478896 FBLL1A6NHQ2 334 aaKnown RBP8.91□□□□□ -0.98
VCL-205ENST00000478896 LINC01556Q5JQF7 62 aa8.91□□□□□ -0.98
VCL-205ENST00000478896 Q6ZSN1 163 aa8.91□□□□□ -0.98
VCL-205ENST00000478896 NTN5Q8WTR8 489 aaPredicted RBP8.91□□□□□ -0.98
VCL-205ENST00000478896 S100ZQ8WXG8 99 aa8.91□□□□□ -0.98
VCL-205ENST00000478896 KCNS1Q96KK3 526 aa8.91□□□□□ -0.98
VCL-205ENST00000478896 PRADC1Q9BSG0 188 aa8.91□□□□□ -0.98
VCL-205ENST00000478896 NDFIP1Q9BT67 221 aa8.91□□□□□ -0.98
VCL-205ENST00000478896 TRAV8-1A0A0A6YYK1 113 aa8.9□□□□□ -0.98
VCL-205ENST00000478896 GATA1P15976 413 aaPredicted RBP8.9□□□□□ -0.98
VCL-205ENST00000478896 GNG5P63218 68 aa8.9□□□□□ -0.98
VCL-205ENST00000478896 ACOT6Q3I5F7 207 aaPredicted RBP8.9□□□□□ -0.98
VCL-205ENST00000478896 PQLC2Q6ZP29 291 aa8.9□□□□□ -0.98
VCL-205ENST00000478896 ASB13Q8WXK3 278 aa8.9□□□□□ -0.98
VCL-205ENST00000478896 IGHV3-73A0A0B4J1V6 119 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 LRCOL1A6NCL2 159 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 INMT-MINDY4F8WBC2 141 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 MPC2O95563 127 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 IGHV3-30P01768 117 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 IGHV3-33P01772 117 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 PFN1P07737 140 aaKnown RBP8.89□□□□□ -0.99
VCL-205ENST00000478896 IGHV3-30-3P0DP02 117 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 IGHV3-30-5P0DP03 117 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 RPL12P30050 165 aaKnown RBP8.89□□□□□ -0.99
VCL-205ENST00000478896 H2BFSP57053 126 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 TIRAPP58753 221 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 RHOHQ15669 191 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 Q8N814 137 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 TMEM70Q9BUB7 260 aa8.89□□□□□ -0.99
VCL-205ENST00000478896 IBA57-AS1B1ANH7 110 aa8.88□□□□□ -0.99
VCL-205ENST00000478896 HMGB3O15347 200 aaKnown RBP8.88□□□□□ -0.99
VCL-205ENST00000478896 SSNA1O43805 119 aa8.88□□□□□ -0.99
VCL-205ENST00000478896 UPK1BO75841 260 aa8.88□□□□□ -0.99
VCL-205ENST00000478896 ZNF876PQ49A33 203 aa8.88□□□□□ -0.99
VCL-205ENST00000478896 SLC25A29Q8N8R3 303 aa8.88□□□□□ -0.99
VCL-205ENST00000478896 TVP23CQ96ET8 276 aa8.88□□□□□ -0.99
VCL-205ENST00000478896 SGK494Q96LW2 274 aa8.88□□□□□ -0.99
VCL-205ENST00000478896 RAB2AP61019 212 aa8.87□□□□□ -0.99
VCL-205ENST00000478896 LINC00299Q6ZSB3 139 aa8.87□□□□□ -0.99
VCL-205ENST00000478896 ARL6IP6Q8N6S5 226 aa8.87□□□□□ -0.99
VCL-205ENST00000478896 SERTM2A0A1B0GWG4 89 aa8.86□□□□□ -0.99
VCL-205ENST00000478896 TRBV6-4A0A1B0GX49 114 aa8.86□□□□□ -0.99
VCL-205ENST00000478896 K7EQM0 130 aa8.86□□□□□ -0.99
VCL-205ENST00000478896 CIDEAO60543 219 aa8.86□□□□□ -0.99
VCL-205ENST00000478896 ZFP69Q49AA0 526 aa8.86□□□□□ -0.99
VCL-205ENST00000478896 LELP1Q5T871 98 aa8.86□□□□□ -0.99
VCL-205ENST00000478896 CFAP126Q5VTH2 177 aa8.86□□□□□ -0.99
VCL-205ENST00000478896 OR10G9Q8NGN4 311 aa8.86□□□□□ -0.99
VCL-205ENST00000478896 OR10G7Q8NGN6 311 aa8.86□□□□□ -0.99
VCL-205ENST00000478896 HERC1Q15751 4861 aa8.85□□□□□ -0.99
VCL-205ENST00000478896 RS1O15537 224 aa8.85□□□□□ -0.99
VCL-205ENST00000478896 GCGP01275 180 aa8.85□□□□□ -0.99
VCL-205ENST00000478896 ARL14EPLP0DKL9 152 aa8.85□□□□□ -0.99
VCL-205ENST00000478896 MGST1P10620 155 aaKnown RBP8.85□□□□□ -0.99
VCL-205ENST00000478896 CDC34P49427 236 aaPredicted RBP8.85□□□□□ -0.99
VCL-205ENST00000478896 ATP6V0E2Q8NHE4 81 aa8.85□□□□□ -0.99
VCL-205ENST00000478896 GTSF1LQ9H1H1 148 aa8.85□□□□□ -0.99
VCL-205ENST00000478896 J3QL48 77 aa8.84□□□□□ -0.99
VCL-205ENST00000478896 TAAR5O14804 337 aa8.84□□□□□ -0.99
VCL-205ENST00000478896 LAGE3Q14657 143 aa8.84□□□□□ -0.99
VCL-205ENST00000478896 ZNF506Q5JVG8 444 aa8.84□□□□□ -0.99
VCL-205ENST00000478896 DPPA3Q6W0C5 159 aa8.84□□□□□ -0.99
VCL-205ENST00000478896 TMEM75Q8N9X5 138 aa8.84□□□□□ -0.99
VCL-205ENST00000478896 C5orf17Q8NAS9 161 aa8.84□□□□□ -0.99
VCL-205ENST00000478896 TM2D2Q9BX73 214 aa8.84□□□□□ -0.99
VCL-205ENST00000478896 WFDC1Q9HC57 220 aa8.84□□□□□ -0.99
VCL-205ENST00000478896 PGPEP1LA6NFU8 196 aa8.83□□□□□ -1
VCL-205ENST00000478896 TCRAP04437 139 aa8.83□□□□□ -1
VCL-205ENST00000478896 ZNF80P51504 273 aaPredicted RBP8.83□□□□□ -1
VCL-205ENST00000478896 SMUG1Q53HV7 270 aa8.83□□□□□ -1
VCL-205ENST00000478896 C9orf85Q96MD7 179 aa8.83□□□□□ -1
VCL-205ENST00000478896 MARVELD1Q9BSK0 173 aa8.83□□□□□ -1
VCL-205ENST00000478896 SH3BGRL3Q9H299 93 aa8.83□□□□□ -1
VCL-205ENST00000478896 PSG8Q9UQ74 426 aa8.83□□□□□ -1
VCL-205ENST00000478896 FAT1Q14517 4588 aa8.83□□□□□ -1
VCL-205ENST00000478896 DMBT1Q9UGM3 2413 aaPredicted RBP8.82□□□□□ -1
VCL-205ENST00000478896 STAG3L2P0CL84 134 aa8.82□□□□□ -1
VCL-205ENST00000478896 STAG3L3P0CL85 134 aa8.82□□□□□ -1
VCL-205ENST00000478896 S100A4P26447 101 aaKnown RBP8.82□□□□□ -1
VCL-205ENST00000478896 IFITM3Q01628 133 aa8.82□□□□□ -1
VCL-205ENST00000478896 PRNTQ86SH4 94 aa8.82□□□□□ -1
VCL-205ENST00000478896 HSD17B11Q8NBQ5 300 aa8.82□□□□□ -1
VCL-205ENST00000478896 FAM30AQ9NZY2 134 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms