RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 FAM159AQ6UWV7 190 aa11.99□□□□□ -0.49
SCAF11-206ENST00000474828 TMEM183AQ8IXX5 376 aa11.99□□□□□ -0.49
SCAF11-206ENST00000474828 KCNS1Q96KK3 526 aa11.99□□□□□ -0.49
SCAF11-206ENST00000474828 NOP10Q9NPE3 64 aaKnown RBP11.99□□□□□ -0.49
SCAF11-206ENST00000474828 GSN-AS1Q9NRJ2 163 aa11.99□□□□□ -0.49
SCAF11-206ENST00000474828 VAX2Q9UIW0 290 aa11.99□□□□□ -0.49
SCAF11-206ENST00000474828 KLK5Q9Y337 293 aaPredicted RBP11.99□□□□□ -0.49
SCAF11-206ENST00000474828 SNURFLB1AK76 121 aa11.98□□□□□ -0.49
SCAF11-206ENST00000474828 AKR1C3P42330 323 aa11.98□□□□□ -0.49
SCAF11-206ENST00000474828 DAD1P61803 113 aa11.98□□□□□ -0.49
SCAF11-206ENST00000474828 UBE2G1P62253 170 aa11.98□□□□□ -0.49
SCAF11-206ENST00000474828 ZNF674Q2M3X9 581 aa11.98□□□□□ -0.49
SCAF11-206ENST00000474828 ZNF767PQ75MW2 155 aa11.98□□□□□ -0.49
SCAF11-206ENST00000474828 ZC2HC1AQ96GY0 325 aa11.98□□□□□ -0.49
SCAF11-206ENST00000474828 FAM210BQ96KR6 192 aa11.98□□□□□ -0.49
SCAF11-206ENST00000474828 TRGV11A0A075B6L2 103 aa11.97□□□□□ -0.49
SCAF11-206ENST00000474828 DEFB131BA0A096LNP1 70 aa11.97□□□□□ -0.49
SCAF11-206ENST00000474828 FABP5P3A8MUU1 101 aa11.97□□□□□ -0.49
SCAF11-206ENST00000474828 MUC21Q5SSG8 566 aa11.97□□□□□ -0.49
SCAF11-206ENST00000474828 ZNF575Q86XF7 245 aa11.97□□□□□ -0.49
SCAF11-206ENST00000474828 MDFICQ9P1T7 246 aa11.97□□□□□ -0.49
SCAF11-206ENST00000474828 ALMS1Q8TCU4 4167 aa11.97□□□□□ -0.49
SCAF11-206ENST00000474828 IGHV3-16A0A0C4DH30 117 aa11.96□□□□□ -0.49
SCAF11-206ENST00000474828 RPL35P42766 123 aaKnown RBP11.96□□□□□ -0.49
SCAF11-206ENST00000474828 ZNF415Q09FC8 603 aa11.96□□□□□ -0.49
SCAF11-206ENST00000474828 DNLZQ5SXM8 178 aa11.96□□□□□ -0.49
SCAF11-206ENST00000474828 SMIM12Q96EX1 92 aa11.96□□□□□ -0.49
SCAF11-206ENST00000474828 SPXQ9BT56 116 aa11.96□□□□□ -0.49
SCAF11-206ENST00000474828 VPS13DQ5THJ4 4388 aa11.95□□□□□ -0.5
SCAF11-206ENST00000474828 IGKV3D-20A0A0C4DH25 116 aa11.95□□□□□ -0.5
SCAF11-206ENST00000474828 TYMSP04818 313 aa11.95□□□□□ -0.5
SCAF11-206ENST00000474828 ZNF506Q5JVG8 444 aa11.95□□□□□ -0.5
SCAF11-206ENST00000474828 Q6ZTI0 123 aa11.95□□□□□ -0.5
SCAF11-206ENST00000474828 RASL10AQ92737 203 aa11.95□□□□□ -0.5
SCAF11-206ENST00000474828 PTH2Q96A98 100 aa11.95□□□□□ -0.5
SCAF11-206ENST00000474828 APLNQ9ULZ1 77 aa11.95□□□□□ -0.5
SCAF11-206ENST00000474828 RBFOX3A6NFN3 312 aa11.94□□□□□ -0.5
SCAF11-206ENST00000474828 GNRH2O43555 120 aa11.94□□□□□ -0.5
SCAF11-206ENST00000474828 IGLV2-8P01709 118 aa11.94□□□□□ -0.5
SCAF11-206ENST00000474828 DEFB130BP0DP73 79 aa11.94□□□□□ -0.5
SCAF11-206ENST00000474828 DEFB130AP0DP74 79 aa11.94□□□□□ -0.5
SCAF11-206ENST00000474828 DERL1Q9BUN8 251 aa11.94□□□□□ -0.5
SCAF11-206ENST00000474828 SDF2L1Q9HCN8 221 aa11.94□□□□□ -0.5
SCAF11-206ENST00000474828 TMEM250H0YL14 139 aa11.93□□□□□ -0.5
SCAF11-206ENST00000474828 ATP5G1P05496 136 aa11.93□□□□□ -0.5
SCAF11-206ENST00000474828 FAM162BQ5T6X4 162 aa11.93□□□□□ -0.5
SCAF11-206ENST00000474828 BAGE2Q86Y30 109 aa11.93□□□□□ -0.5
SCAF11-206ENST00000474828 C9orf85Q96MD7 179 aa11.93□□□□□ -0.5
SCAF11-206ENST00000474828 TRBV20OR9-2A0A075B6H5 130 aa11.92□□□□□ -0.5
SCAF11-206ENST00000474828 LCE6AA0A183 80 aa11.92□□□□□ -0.5
SCAF11-206ENST00000474828 KRBOX1C9JBD0 128 aa11.92□□□□□ -0.5
SCAF11-206ENST00000474828 SH2D1AO60880 128 aa11.92□□□□□ -0.5
SCAF11-206ENST00000474828 LINC01559Q495D7 138 aa11.92□□□□□ -0.5
SCAF11-206ENST00000474828 FAM210AQ96ND0 272 aa11.92□□□□□ -0.5
SCAF11-206ENST00000474828 NDUFAF3Q9BU61 184 aa11.92□□□□□ -0.5
SCAF11-206ENST00000474828 RYR2Q92736 4967 aa11.91□□□□□ -0.5
SCAF11-206ENST00000474828 IGHV4-4A0A075B6R2 117 aa11.91□□□□□ -0.5
SCAF11-206ENST00000474828 GAGE12BA1L429 117 aa11.91□□□□□ -0.5
SCAF11-206ENST00000474828 GAGE7O76087 117 aa11.91□□□□□ -0.5
SCAF11-206ENST00000474828 GAGE12FP0CL80 117 aa11.91□□□□□ -0.5
SCAF11-206ENST00000474828 GAGE12GP0CL81 117 aa11.91□□□□□ -0.5
SCAF11-206ENST00000474828 GAGE12IP0CL82 117 aa11.91□□□□□ -0.5
SCAF11-206ENST00000474828 RNASE3P12724 160 aaKnown RBP11.91□□□□□ -0.5
SCAF11-206ENST00000474828 PIK3CD-AS1Q5SR53 167 aa11.91□□□□□ -0.5
SCAF11-206ENST00000474828 NAGKQ9UJ70 344 aa11.91□□□□□ -0.5
SCAF11-206ENST00000474828 IGLL5B9A064 214 aa11.9□□□□□ -0.5
SCAF11-206ENST00000474828 C9JCJ5 164 aa11.9□□□□□ -0.5
SCAF11-206ENST00000474828 M0R2P5 195 aa11.9□□□□□ -0.5
SCAF11-206ENST00000474828 CXCL1P09341 107 aa11.9□□□□□ -0.5
SCAF11-206ENST00000474828 MED9Q9NWA0 146 aa11.9□□□□□ -0.5
SCAF11-206ENST00000474828 TRGV1A0A0A0MS02 117 aa11.89□□□□□ -0.51
SCAF11-206ENST00000474828 H3BNG1 76 aa11.89□□□□□ -0.51
SCAF11-206ENST00000474828 CENPWQ5EE01 88 aa11.89□□□□□ -0.51
SCAF11-206ENST00000474828 SCRT2Q9NQ03 307 aa11.89□□□□□ -0.51
SCAF11-206ENST00000474828 IL36BQ9NZH7 164 aa11.89□□□□□ -0.51
SCAF11-206ENST00000474828 RAB19A4D1S5 217 aa11.88□□□□□ -0.51
SCAF11-206ENST00000474828 HOXA5P20719 270 aa11.88□□□□□ -0.51
SCAF11-206ENST00000474828 LGALS9CQ6DKI2 356 aa11.88□□□□□ -0.51
SCAF11-206ENST00000474828 POM121L12Q8N7R1 296 aa11.88□□□□□ -0.51
SCAF11-206ENST00000474828 NHLRC2Q8NBF2 726 aa11.88□□□□□ -0.51
SCAF11-206ENST00000474828 LINC00476Q8WZB0 136 aa11.88□□□□□ -0.51
SCAF11-206ENST00000474828 MRPL16Q9NX20 251 aaKnown RBP11.88□□□□□ -0.51
SCAF11-206ENST00000474828 C19orf71A6NCJ1 209 aa11.87□□□□□ -0.51
SCAF11-206ENST00000474828 B4DEV8 164 aa11.87□□□□□ -0.51
SCAF11-206ENST00000474828 TMEM88Q6PEY1 159 aa11.87□□□□□ -0.51
SCAF11-206ENST00000474828 TRGV2A0A075B6R0 118 aa11.86□□□□□ -0.51
SCAF11-206ENST00000474828 ORM1P02763 201 aa11.86□□□□□ -0.51
SCAF11-206ENST00000474828 MED14OSP0DP75 135 aa11.86□□□□□ -0.51
SCAF11-206ENST00000474828 GNG4P50150 75 aa11.86□□□□□ -0.51
SCAF11-206ENST00000474828 TOR2AQ5JU69 321 aa11.86□□□□□ -0.51
SCAF11-206ENST00000474828 C15orf53Q8NAA6 179 aa11.86□□□□□ -0.51
SCAF11-206ENST00000474828 PARLQ9H300 379 aa11.86□□□□□ -0.51
SCAF11-206ENST00000474828 SMDT1Q9H4I9 107 aa11.86□□□□□ -0.51
SCAF11-206ENST00000474828 SRP19P09132 144 aaKnown RBP11.85□□□□□ -0.51
SCAF11-206ENST00000474828 HTN3P15516 51 aa11.85□□□□□ -0.51
SCAF11-206ENST00000474828 ASIPP42127 132 aa11.85□□□□□ -0.51
SCAF11-206ENST00000474828 SSBP4Q9BWG4 385 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-206ENST00000474828 HYDINQ4G0P3 5121 aa11.84□□□□□ -0.51
SCAF11-206ENST00000474828 TRAV4A0A0B4J268 109 aa11.84□□□□□ -0.51
SCAF11-206ENST00000474828 F5H768 121 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms