RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 IGHV3-16A0A0C4DH30 117 aa7.39□□□□□ -1.23
CASC3-204ENST00000474190 SMIM9A6NGZ8 99 aa7.39□□□□□ -1.23
CASC3-204ENST00000474190 RAB14P61106 215 aa7.39□□□□□ -1.23
CASC3-204ENST00000474190 OR5I1Q13606 314 aa7.39□□□□□ -1.23
CASC3-204ENST00000474190 LINC00612Q8N6U2 182 aa7.39□□□□□ -1.23
CASC3-204ENST00000474190 NIPSNAP3BQ9BS92 247 aa7.39□□□□□ -1.23
CASC3-204ENST00000474190 ZMAT4Q9H898 229 aa7.39□□□□□ -1.23
CASC3-204ENST00000474190 VPS13DQ5THJ4 4388 aa7.38□□□□□ -1.23
CASC3-204ENST00000474190 SACSQ9NZJ4 4579 aa7.38□□□□□ -1.23
CASC3-204ENST00000474190 KRBOX1C9JBD0 128 aa7.38□□□□□ -1.23
CASC3-204ENST00000474190 TYMSP04818 313 aa7.38□□□□□ -1.23
CASC3-204ENST00000474190 RNASE3P12724 160 aaKnown RBP7.38□□□□□ -1.23
CASC3-204ENST00000474190 GNG4P50150 75 aa7.38□□□□□ -1.23
CASC3-204ENST00000474190 RPL19P84098 196 aaKnown RBP7.38□□□□□ -1.23
CASC3-204ENST00000474190 PEA15Q15121 130 aa7.38□□□□□ -1.23
CASC3-204ENST00000474190 RRN3P1Q2M238 152 aa7.38□□□□□ -1.23
CASC3-204ENST00000474190 LINC01559Q495D7 138 aa7.38□□□□□ -1.23
CASC3-204ENST00000474190 LINC01551Q86U37 167 aa7.38□□□□□ -1.23
CASC3-204ENST00000474190 TMEM263Q8WUH6 116 aaKnown RBP7.38□□□□□ -1.23
CASC3-204ENST00000474190 SMIM12Q96EX1 92 aa7.38□□□□□ -1.23
CASC3-204ENST00000474190 NDFIP1Q9BT67 221 aa7.38□□□□□ -1.23
CASC3-204ENST00000474190 FABP5P3A8MUU1 101 aa7.37□□□□□ -1.23
CASC3-204ENST00000474190 DNLZQ5SXM8 178 aa7.37□□□□□ -1.23
CASC3-204ENST00000474190 FAM162BQ5T6X4 162 aa7.37□□□□□ -1.23
CASC3-204ENST00000474190 C9orf85Q96MD7 179 aa7.37□□□□□ -1.23
CASC3-204ENST00000474190 SMIM7Q9BQ49 75 aa7.37□□□□□ -1.23
CASC3-204ENST00000474190 GSN-AS1Q9NRJ2 163 aa7.37□□□□□ -1.23
CASC3-204ENST00000474190 DKK2Q9UBU2 259 aa7.37□□□□□ -1.23
CASC3-204ENST00000474190 LY96Q9Y6Y9 160 aa7.37□□□□□ -1.23
CASC3-204ENST00000474190 SFTA3P0C7M3 94 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 HTN1P15515 57 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 CEBPGP53567 150 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 TCL1AP56279 114 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 RPL23P62829 140 aaKnown RBP7.36□□□□□ -1.23
CASC3-204ENST00000474190 DAZ2Q13117 558 aaKnown RBP7.36□□□□□ -1.23
CASC3-204ENST00000474190 C12orf74Q32Q52 190 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 IBA57Q5T440 356 aaKnown RBP7.36□□□□□ -1.23
CASC3-204ENST00000474190 ZNF493Q6ZR52 646 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 COMMD7Q86VX2 200 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 NUDT10Q8NFP7 164 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 NUDT11Q96G61 164 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 TMEM208Q9BTX3 173 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 SCRT2Q9NQ03 307 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 LYSTQ99698 3801 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 PCLOQ9Y6V0 5065 aa7.36□□□□□ -1.23
CASC3-204ENST00000474190 TMEM218A2RU14 115 aa7.35□□□□□ -1.23
CASC3-204ENST00000474190 ZNF727A8MUV8 499 aa7.35□□□□□ -1.23
CASC3-204ENST00000474190 M0R036 132 aa7.35□□□□□ -1.23
CASC3-204ENST00000474190 SPINK4O60575 86 aa7.35□□□□□ -1.23
CASC3-204ENST00000474190 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
CASC3-204ENST00000474190 UQCC3Q6UW78 93 aa7.35□□□□□ -1.23
CASC3-204ENST00000474190 POM121L12Q8N7R1 296 aa7.35□□□□□ -1.23
CASC3-204ENST00000474190 C16orf74Q96GX8 76 aa7.35□□□□□ -1.23
CASC3-204ENST00000474190 WWC2-AS2Q96NR7 200 aa7.35□□□□□ -1.23
CASC3-204ENST00000474190 RNASE7Q9H1E1 156 aaKnown RBP7.35□□□□□ -1.23
CASC3-204ENST00000474190 SDF2L1Q9HCN8 221 aa7.35□□□□□ -1.23
CASC3-204ENST00000474190 NOP10Q9NPE3 64 aaKnown RBP7.35□□□□□ -1.23
CASC3-204ENST00000474190 NAGKQ9UJ70 344 aa7.35□□□□□ -1.23
CASC3-204ENST00000474190 GRIFINA4D1Z8 144 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 CBY3A6NI87 242 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 IGLC6P0CF74 106 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 MGST1P10620 155 aaKnown RBP7.34□□□□□ -1.23
CASC3-204ENST00000474190 EMP1P54849 157 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 NANOS2P60321 138 aaKnown RBP7.34□□□□□ -1.23
CASC3-204ENST00000474190 FAM74A3Q4VXF1 159 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 SOHLH1Q5JUK2 328 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 C10orf91Q5T1B1 145 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 PRR27Q6MZM9 219 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 FAM159AQ6UWV7 190 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 Q6ZTI0 123 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 FAM231DQ6ZW35 169 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 ISOC2Q96AB3 205 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 SSBP4Q9BWG4 385 aaPredicted RBP7.34□□□□□ -1.23
CASC3-204ENST00000474190 TENM2Q9NT68 2774 aa7.34□□□□□ -1.23
CASC3-204ENST00000474190 TMSB15BA0A087X1C1 80 aa7.33□□□□□ -1.24
CASC3-204ENST00000474190 TMEM189A5PLL7 270 aa7.33□□□□□ -1.24
CASC3-204ENST00000474190 B4DEV8 164 aa7.33□□□□□ -1.24
CASC3-204ENST00000474190 ORM1P02763 201 aa7.33□□□□□ -1.24
CASC3-204ENST00000474190 CXCL1P09341 107 aa7.33□□□□□ -1.24
CASC3-204ENST00000474190 GZMBP10144 247 aa7.33□□□□□ -1.24
CASC3-204ENST00000474190 TMEM241Q24JQ0 296 aa7.33□□□□□ -1.24
CASC3-204ENST00000474190 GTSF1Q8WW33 167 aa7.33□□□□□ -1.24
CASC3-204ENST00000474190 TIMM8BQ9Y5J9 83 aaPredicted RBP7.33□□□□□ -1.24
CASC3-204ENST00000474190 V9GYV3 84 aa7.33□□□□□ -1.24
CASC3-204ENST00000474190 ALMS1Q8TCU4 4167 aa7.33□□□□□ -1.24
CASC3-204ENST00000474190 TRGV11A0A075B6L2 103 aa7.32□□□□□ -1.24
CASC3-204ENST00000474190 LYRM9A8MSI8 78 aa7.32□□□□□ -1.24
CASC3-204ENST00000474190 SNAI2O43623 268 aa7.32□□□□□ -1.24
CASC3-204ENST00000474190 NXPH4O95158 308 aa7.32□□□□□ -1.24
CASC3-204ENST00000474190 Q6ZTC4 211 aa7.32□□□□□ -1.24
CASC3-204ENST00000474190 RASL10AQ92737 203 aa7.32□□□□□ -1.24
CASC3-204ENST00000474190 PTH2Q96A98 100 aa7.32□□□□□ -1.24
CASC3-204ENST00000474190 KCNS1Q96KK3 526 aa7.32□□□□□ -1.24
CASC3-204ENST00000474190 C18orf15Q96N68 181 aa7.32□□□□□ -1.24
CASC3-204ENST00000474190 IL36BQ9NZH7 164 aa7.32□□□□□ -1.24
CASC3-204ENST00000474190 NAT8Q9UHE5 227 aa7.32□□□□□ -1.24
CASC3-204ENST00000474190 ARMS2P0C7Q2 107 aa7.31□□□□□ -1.24
CASC3-204ENST00000474190 UFSP1Q6NVU6 142 aa7.31□□□□□ -1.24
CASC3-204ENST00000474190 SLC7A5P1Q8MH63 180 aa7.31□□□□□ -1.24
CASC3-204ENST00000474190 OSTCQ9NRP0 149 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms