RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 C9orf47Q6ZRZ4 202 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 LINC00469Q8N7U9 141 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 VGLL1Q99990 258 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 MS4A6AQ9H2W1 248 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 UFC1Q9Y3C8 167 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 SMAD5-AS1Q9Y6J3 95 aa4.5□□□□□ -1.69
ATPAF1-204ENST00000474020 ABCA4P78363 2273 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHV4-30-2A0A087WSY4 118 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 TRAV21A0A0B4J279 112 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 TRBV7-9A0A0J9YWB2 115 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 C2orf70A6NJV1 201 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 TCAPO15273 167 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 CRXO43186 299 aaPredicted RBP4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 ZNF207O43670 478 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 HBDP02042 147 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 IGLC6P0CF74 106 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 IGLC3P0DOY3 106 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHV4-38-2P0DP08 117 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 S100A4P26447 101 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 CRIP1P50238 77 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 NUTF2P61970 127 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 ERCC8Q13216 396 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 SPANXN1Q5VSR9 72 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 EBLN2Q6P2I7 272 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 IL17RELQ6ZVW7 336 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 RNF182Q8N6D2 247 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 OR4X2Q8NGF9 303 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 GLMPQ8WWB7 406 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 C1orf43Q9BWL3 253 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 SNHG12Q9BXW3 62 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 DAZ1Q9NQZ3 744 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 PPP1R14DQ9NXH3 145 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 MRPS16Q9Y3D3 137 aaKnown RBP4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 U3KQK5 164 aa4.49□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHV3OR16-13A0A075B7E8 117 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHV3-49A0A0A0MS15 119 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHV3-74A0A0B4J1X5 117 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 LOC389332A0A1B0GUA5 103 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 TMEM213A2RRL7 107 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 CLPSL1A2RUU4 121 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 LINC01548A6NM66 108 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 H0Y8G0 127 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 K7EMT4 169 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 TCF21O43680 179 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 PPP1R17O96001 155 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 ASIPP42127 132 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 MRPL51Q4U2R6 128 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 SLC25A34Q6PIV7 304 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 SPATA12Q7Z6I5 190 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 AMN1Q8IY45 258 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 ATOH7Q8N100 152 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 Q8N976 141 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 OR8A1Q8NGG7 326 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 MRAP2Q96G30 205 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 CNFNQ9BYD5 112 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 AGPAT4-IT1Q9H0P7 198 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 BEX4Q9NWD9 120 aaPredicted RBP4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 PEF1Q9UBV8 284 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 LINC00527Q9UJ94 153 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 PLXNB1O43157 2135 aa4.48□□□□□ -1.69
ATPAF1-204ENST00000474020 TRAV8-2A0A0B4J237 113 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHV7-4-1A0A0J9YVY3 117 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 TGFAP01135 160 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 IGHV3-11P01762 117 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 G0S2P27469 103 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 HLA-DMBP28068 263 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 TSPOP30536 169 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 LEPP41159 167 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 SNRPD3P62318 126 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 LINC01545Q5VT33 79 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 C12orf54Q6X4T0 127 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 OR1N2Q8NGR9 330 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 PIFOQ8TCI5 191 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 RHPN1-AS1Q9BWJ2 59 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 SIGLEC8Q9NYZ4 499 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 GOLT1BQ9Y3E0 138 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 COL6A6A6NMZ7 2263 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 DOPEY2Q9Y3R5 2298 aa4.47□□□□□ -1.69
ATPAF1-204ENST00000474020 POLQO75417 2590 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 DNAJC9-AS1A6NH13 148 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 LINC01549A6NIU2 74 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 PRAC2D3DTV9 90 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 ATP5LO75964 103 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 IGHG4P01861 327 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 SMIM17P0DL12 118 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 PPIFP30405 207 aaKnown RBP4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 IFI27P40305 119 aaPredicted RBP4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 ZNF80P51504 273 aaPredicted RBP4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 LOXL1Q08397 574 aaPredicted RBP4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 LGALS9BQ3B8N2 356 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 TDRG1Q3Y452 100 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 LGALS9CQ6DKI2 356 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 GPHB5Q86YW7 130 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 LRRC75A-AS1Q8N1F1 130 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 ZNF843Q8N446 348 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 DPF1Q92782 380 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 IFI27L1Q96BM0 104 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 URB1-AS1Q96HZ7 61 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 SMPXQ9UHP9 88 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 VPREB3Q9UKI3 123 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms