RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 NHLRC2Q8NBF2 726 aa8.83□□□□□ -1
DDX56-209ENST00000473924 C11orf52Q96A22 123 aa8.83□□□□□ -1
DDX56-209ENST00000473924 ZC2HC1AQ96GY0 325 aa8.83□□□□□ -1
DDX56-209ENST00000473924 MED9Q9NWA0 146 aa8.83□□□□□ -1
DDX56-209ENST00000473924 TRGV1A0A0A0MS02 117 aa8.82□□□□□ -1
DDX56-209ENST00000473924 RBFOX3A6NFN3 312 aa8.82□□□□□ -1
DDX56-209ENST00000473924 IGLL5B9A064 214 aa8.82□□□□□ -1
DDX56-209ENST00000473924 GNRH2O43555 120 aa8.82□□□□□ -1
DDX56-209ENST00000473924 RPL35P42766 123 aaKnown RBP8.82□□□□□ -1
DDX56-209ENST00000473924 BAGE2Q86Y30 109 aa8.82□□□□□ -1
DDX56-209ENST00000473924 LYPD6BQ8NI32 183 aa8.82□□□□□ -1
DDX56-209ENST00000473924 MDFICQ9P1T7 246 aa8.82□□□□□ -1
DDX56-209ENST00000473924 ORM1P02763 201 aa8.81□□□□□ -1
DDX56-209ENST00000473924 TYMSP04818 313 aa8.81□□□□□ -1
DDX56-209ENST00000473924 ATP5G1P05496 136 aa8.81□□□□□ -1
DDX56-209ENST00000473924 FAM162BQ5T6X4 162 aa8.81□□□□□ -1
DDX56-209ENST00000473924 Q6ZTI0 123 aa8.81□□□□□ -1
DDX56-209ENST00000473924 COX8CQ7Z4L0 72 aa8.81□□□□□ -1
DDX56-209ENST00000473924 DERL1Q9BUN8 251 aa8.81□□□□□ -1
DDX56-209ENST00000473924 EIF5A2Q9GZV4 153 aaKnown RBP8.81□□□□□ -1
DDX56-209ENST00000473924 C11orf21Q9P2W6 132 aa8.81□□□□□ -1
DDX56-209ENST00000473924 TRGV2A0A075B6R0 118 aa8.8□□□□□ -1
DDX56-209ENST00000473924 SPINK4O60575 86 aa8.8□□□□□ -1
DDX56-209ENST00000473924 SH2D1AO60880 128 aa8.8□□□□□ -1
DDX56-209ENST00000473924 CRIP1P50238 77 aa8.8□□□□□ -1
DDX56-209ENST00000473924 TOR2AQ5JU69 321 aa8.8□□□□□ -1
DDX56-209ENST00000473924 PCNPQ8WW12 178 aaKnown RBP8.8□□□□□ -1
DDX56-209ENST00000473924 SPXQ9BT56 116 aa8.8□□□□□ -1
DDX56-209ENST00000473924 MRPL16Q9NX20 251 aaKnown RBP8.8□□□□□ -1
DDX56-209ENST00000473924 IGHV4-4A0A075B6R2 117 aa8.79□□□□□ -1
DDX56-209ENST00000473924 IGHV3-16A0A0C4DH30 117 aa8.79□□□□□ -1
DDX56-209ENST00000473924 B4DEV8 164 aa8.79□□□□□ -1
DDX56-209ENST00000473924 F5H768 121 aa8.79□□□□□ -1
DDX56-209ENST00000473924 M0R036 132 aa8.79□□□□□ -1
DDX56-209ENST00000473924 S100A4P26447 101 aaKnown RBP8.79□□□□□ -1
DDX56-209ENST00000473924 GNG4P50150 75 aa8.79□□□□□ -1
DDX56-209ENST00000473924 ZNF674Q2M3X9 581 aa8.79□□□□□ -1
DDX56-209ENST00000473924 LGALS9BQ3B8N2 356 aa8.79□□□□□ -1
DDX56-209ENST00000473924 CENPWQ5EE01 88 aa8.79□□□□□ -1
DDX56-209ENST00000473924 ZNF506Q5JVG8 444 aa8.79□□□□□ -1
DDX56-209ENST00000473924 PRR27Q6MZM9 219 aa8.79□□□□□ -1
DDX56-209ENST00000473924 LINC00612Q8N6U2 182 aa8.79□□□□□ -1
DDX56-209ENST00000473924 DNAH7Q8WXX0 4024 aa8.79□□□□□ -1
DDX56-209ENST00000473924 IGKV3D-20A0A0C4DH25 116 aa8.78□□□□□ -1
DDX56-209ENST00000473924 RAB19A4D1S5 217 aa8.78□□□□□ -1
DDX56-209ENST00000473924 MGST1P10620 155 aaKnown RBP8.78□□□□□ -1
DDX56-209ENST00000473924 CEBPGP53567 150 aa8.78□□□□□ -1
DDX56-209ENST00000473924 TCTAP57738 103 aa8.78□□□□□ -1
DDX56-209ENST00000473924 FAM210AQ96ND0 272 aa8.78□□□□□ -1
DDX56-209ENST00000473924 NDUFAF3Q9BU61 184 aa8.78□□□□□ -1
DDX56-209ENST00000473924 MLST8Q9BVC4 326 aa8.78□□□□□ -1
DDX56-209ENST00000473924 CSMD3Q7Z407 3707 aa8.78□□□□□ -1
DDX56-209ENST00000473924 TMSB15BA0A087X1C1 80 aa8.77□□□□□ -1.01
DDX56-209ENST00000473924 TMEM250H0YL14 139 aa8.77□□□□□ -1.01
DDX56-209ENST00000473924 M0R2P5 195 aa8.77□□□□□ -1.01
DDX56-209ENST00000473924 ASIPP42127 132 aa8.77□□□□□ -1.01
DDX56-209ENST00000473924 OR5I1Q13606 314 aa8.77□□□□□ -1.01
DDX56-209ENST00000473924 FAM210BQ96KR6 192 aa8.77□□□□□ -1.01
DDX56-209ENST00000473924 TENM2Q9NT68 2774 aa8.77□□□□□ -1.01
DDX56-209ENST00000473924 GRIFINA4D1Z8 144 aa8.76□□□□□ -1.01
DDX56-209ENST00000473924 KRBOX1C9JBD0 128 aa8.76□□□□□ -1.01
DDX56-209ENST00000473924 C9JCJ5 164 aa8.76□□□□□ -1.01
DDX56-209ENST00000473924 RAB14P61106 215 aa8.76□□□□□ -1.01
DDX56-209ENST00000473924 TMEM88Q6PEY1 159 aa8.76□□□□□ -1.01
DDX56-209ENST00000473924 DAZAP1Q96EP5 407 aaKnown RBP8.76□□□□□ -1.01
DDX56-209ENST00000473924 SMIM12Q96EX1 92 aa8.76□□□□□ -1.01
DDX56-209ENST00000473924 C18orf15Q96N68 181 aa8.76□□□□□ -1.01
DDX56-209ENST00000473924 PARLQ9H300 379 aa8.76□□□□□ -1.01
DDX56-209ENST00000473924 APLNQ9ULZ1 77 aa8.76□□□□□ -1.01
DDX56-209ENST00000473924 TRBV20OR9-2A0A075B6H5 130 aa8.75□□□□□ -1.01
DDX56-209ENST00000473924 IGHV3-53P01767 116 aa8.75□□□□□ -1.01
DDX56-209ENST00000473924 LINC01559Q495D7 138 aa8.75□□□□□ -1.01
DDX56-209ENST00000473924 ZNF876PQ49A33 203 aa8.75□□□□□ -1.01
DDX56-209ENST00000473924 RASL10AQ92737 203 aa8.75□□□□□ -1.01
DDX56-209ENST00000473924 C9orf85Q96MD7 179 aa8.75□□□□□ -1.01
DDX56-209ENST00000473924 BIN3Q9NQY0 253 aa8.75□□□□□ -1.01
DDX56-209ENST00000473924 PGPEP1LA6NFU8 196 aa8.74□□□□□ -1.01
DDX56-209ENST00000473924 LY6G6CO95867 125 aa8.74□□□□□ -1.01
DDX56-209ENST00000473924 IGLV2-8P01709 118 aa8.74□□□□□ -1.01
DDX56-209ENST00000473924 RNASE3P12724 160 aaKnown RBP8.74□□□□□ -1.01
DDX56-209ENST00000473924 LCE6AA0A183 80 aa8.73□□□□□ -1.01
DDX56-209ENST00000473924 H3BVH4 76 aa8.73□□□□□ -1.01
DDX56-209ENST00000473924 NDUFS6O75380 124 aaKnown RBP8.73□□□□□ -1.01
DDX56-209ENST00000473924 ARMS2P0C7Q2 107 aa8.73□□□□□ -1.01
DDX56-209ENST00000473924 HOXA5P20719 270 aa8.73□□□□□ -1.01
DDX56-209ENST00000473924 RPL19P84098 196 aaKnown RBP8.73□□□□□ -1.01
DDX56-209ENST00000473924 PEA15Q15121 130 aa8.73□□□□□ -1.01
DDX56-209ENST00000473924 C15orf53Q8NAA6 179 aa8.73□□□□□ -1.01
DDX56-209ENST00000473924 OR4C5Q8NGB2 326 aa8.73□□□□□ -1.01
DDX56-209ENST00000473924 IL36BQ9NZH7 164 aa8.73□□□□□ -1.01
DDX56-209ENST00000473924 STARD9Q9P2P6 4700 aa8.73□□□□□ -1.01
DDX56-209ENST00000473924 TRAV26-1A0A087WT03 109 aa8.72□□□□□ -1.01
DDX56-209ENST00000473924 TRAV4A0A0B4J268 109 aa8.72□□□□□ -1.01
DDX56-209ENST00000473924 TRGV4A0A0C4DH28 118 aa8.72□□□□□ -1.01
DDX56-209ENST00000473924 A0A0J9YY99 117 aa8.72□□□□□ -1.01
DDX56-209ENST00000473924 NUDT3O95989 172 aa8.72□□□□□ -1.01
DDX56-209ENST00000473924 SRP19P09132 144 aaKnown RBP8.72□□□□□ -1.01
DDX56-209ENST00000473924 SFTA3P0C7M3 94 aa8.72□□□□□ -1.01
DDX56-209ENST00000473924 DNLZQ5SXM8 178 aa8.72□□□□□ -1.01
DDX56-209ENST00000473924 SYT8Q8NBV8 401 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms