RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 ZNF471Q9BX82 626 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-218ENST00000470942 TRAV34A0A0B4J273 112 aa10.9□□□□□ -0.66
HDAC6-218ENST00000470942 IGHV3-16A0A0C4DH30 117 aa10.9□□□□□ -0.66
HDAC6-218ENST00000470942 FBLL1A6NHQ2 334 aaKnown RBP10.9□□□□□ -0.66
HDAC6-218ENST00000470942 RTL8CO15255 209 aa10.9□□□□□ -0.66
HDAC6-218ENST00000470942 PAX4O43316 350 aa10.9□□□□□ -0.66
HDAC6-218ENST00000470942 IGLV2-11P01706 119 aa10.9□□□□□ -0.66
HDAC6-218ENST00000470942 TYMSP04818 313 aa10.9□□□□□ -0.66
HDAC6-218ENST00000470942 ZNF80P51504 273 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-218ENST00000470942 SMUG1Q53HV7 270 aa10.9□□□□□ -0.66
HDAC6-218ENST00000470942 STOML3Q8TAV4 291 aa10.9□□□□□ -0.66
HDAC6-218ENST00000470942 NKX6-2Q9C056 277 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-218ENST00000470942 TRGV4A0A0C4DH28 118 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 PRSS29PA6NIE9 313 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 FAM74A7A6NL05 159 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 BCL2L11O43521 198 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 FHITP49789 147 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 PPT1P50897 306 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 SLAQ13239 276 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 ESRGQ1W209 222 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 SOHLH1Q5JUK2 328 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 SAPCD1Q5SSQ6 148 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 RASL10AQ92737 203 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 LINC00479Q96M42 142 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 PRO0255Q9UI72 69 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 HHLA3Q9XRX5 114 aa10.89□□□□□ -0.67
HDAC6-218ENST00000470942 A0A096LPF7 62 aa10.88□□□□□ -0.67
HDAC6-218ENST00000470942 NBDYA0A0U1RRE5 68 aa10.88□□□□□ -0.67
HDAC6-218ENST00000470942 M0R2P5 195 aa10.88□□□□□ -0.67
HDAC6-218ENST00000470942 PEX7O00628 323 aa10.88□□□□□ -0.67
HDAC6-218ENST00000470942 PFDN1O60925 122 aa10.88□□□□□ -0.67
HDAC6-218ENST00000470942 PFN1P07737 140 aaKnown RBP10.88□□□□□ -0.67
HDAC6-218ENST00000470942 SFTA3P0C7M3 94 aa10.88□□□□□ -0.67
HDAC6-218ENST00000470942 SEC11BP0C7V7 166 aa10.88□□□□□ -0.67
HDAC6-218ENST00000470942 FHL2Q14192 279 aa10.88□□□□□ -0.67
HDAC6-218ENST00000470942 C1orf134Q5TEV5 83 aa10.88□□□□□ -0.67
HDAC6-218ENST00000470942 ZNF479Q96JC4 524 aa10.88□□□□□ -0.67
HDAC6-218ENST00000470942 HECTD4Q9Y4D8 3996 aa10.88□□□□□ -0.67
HDAC6-218ENST00000470942 ICOSQ9Y6W8 199 aa10.88□□□□□ -0.67
HDAC6-218ENST00000470942 CRYBA4P53673 196 aa10.87□□□□□ -0.67
HDAC6-218ENST00000470942 EIF5AP63241 154 aaKnown RBP10.87□□□□□ -0.67
HDAC6-218ENST00000470942 CST9LP1Q5W188 147 aa10.87□□□□□ -0.67
HDAC6-218ENST00000470942 TMUB2Q71RG4 321 aa10.87□□□□□ -0.67
HDAC6-218ENST00000470942 FAM213BQ8TBF2 198 aa10.87□□□□□ -0.67
HDAC6-218ENST00000470942 HIST1H2BAQ96A08 127 aa10.87□□□□□ -0.67
HDAC6-218ENST00000470942 Q9H8V8 135 aa10.87□□□□□ -0.67
HDAC6-218ENST00000470942 C11orf21Q9P2W6 132 aa10.87□□□□□ -0.67
HDAC6-218ENST00000470942 UMAD1C9J7I0 102 aa10.86□□□□□ -0.67
HDAC6-218ENST00000470942 OR4C5Q8NGB2 326 aa10.86□□□□□ -0.67
HDAC6-218ENST00000470942 SFT2D1Q8WV19 159 aa10.86□□□□□ -0.67
HDAC6-218ENST00000470942 ARL2-SNX15V9GYD0 113 aa10.86□□□□□ -0.67
HDAC6-218ENST00000470942 TRAV4A0A0B4J268 109 aa10.85□□□□□ -0.67
HDAC6-218ENST00000470942 A0A1B0GV50 99 aa10.85□□□□□ -0.67
HDAC6-218ENST00000470942 C9JCJ5 164 aa10.85□□□□□ -0.67
HDAC6-218ENST00000470942 MRPS16Q9Y3D3 137 aaKnown RBP10.85□□□□□ -0.67
HDAC6-218ENST00000470942 TPT1P13693 172 aaKnown RBP10.84□□□□□ -0.67
HDAC6-218ENST00000470942 UBE2G1P62253 170 aa10.84□□□□□ -0.67
HDAC6-218ENST00000470942 MRPL23Q16540 153 aaKnown RBP10.84□□□□□ -0.67
HDAC6-218ENST00000470942 Q86TA4 180 aa10.84□□□□□ -0.67
HDAC6-218ENST00000470942 MBD3L1Q8WWY6 194 aa10.84□□□□□ -0.67
HDAC6-218ENST00000470942 UPK3BQ9BT76 320 aa10.84□□□□□ -0.67
HDAC6-218ENST00000470942 FAT2Q9NYQ8 4349 aa10.84□□□□□ -0.67
HDAC6-218ENST00000470942 FABP5P3A8MUU1 101 aa10.83□□□□□ -0.68
HDAC6-218ENST00000470942 PAGE4O60829 102 aa10.83□□□□□ -0.68
HDAC6-218ENST00000470942 ZNF876PQ49A33 203 aa10.83□□□□□ -0.68
HDAC6-218ENST00000470942 DPPA3Q6W0C5 159 aa10.83□□□□□ -0.68
HDAC6-218ENST00000470942 C6orf223Q8N319 242 aa10.83□□□□□ -0.68
HDAC6-218ENST00000470942 PCNPQ8WW12 178 aaKnown RBP10.83□□□□□ -0.68
HDAC6-218ENST00000470942 A0A1B0GVY2 172 aa10.82□□□□□ -0.68
HDAC6-218ENST00000470942 H2AFB1P0C5Y9 115 aa10.82□□□□□ -0.68
HDAC6-218ENST00000470942 GYPEP15421 78 aa10.82□□□□□ -0.68
HDAC6-218ENST00000470942 AKR1C3P42330 323 aa10.82□□□□□ -0.68
HDAC6-218ENST00000470942 FMC1Q96HJ9 113 aa10.82□□□□□ -0.68
HDAC6-218ENST00000470942 ZFP30Q9Y2G7 519 aa10.82□□□□□ -0.68
HDAC6-218ENST00000470942 K7EQD1 137 aa10.81□□□□□ -0.68
HDAC6-218ENST00000470942 ORM1P02763 201 aa10.81□□□□□ -0.68
HDAC6-218ENST00000470942 S100A4P26447 101 aaKnown RBP10.81□□□□□ -0.68
HDAC6-218ENST00000470942 SRIP30626 198 aa10.81□□□□□ -0.68
HDAC6-218ENST00000470942 TTC32Q5I0X7 151 aa10.81□□□□□ -0.68
HDAC6-218ENST00000470942 NEGR1Q7Z3B1 354 aa10.81□□□□□ -0.68
HDAC6-218ENST00000470942 ZC2HC1AQ96GY0 325 aa10.81□□□□□ -0.68
HDAC6-218ENST00000470942 C9orf85Q96MD7 179 aa10.81□□□□□ -0.68
HDAC6-218ENST00000470942 TCEAL7Q9BRU2 100 aa10.81□□□□□ -0.68
HDAC6-218ENST00000470942 IGKV3D-20A0A0C4DH25 116 aa10.8□□□□□ -0.68
HDAC6-218ENST00000470942 PGPEP1LA6NFU8 196 aa10.8□□□□□ -0.68
HDAC6-218ENST00000470942 LGALSLQ3ZCW2 172 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-218ENST00000470942 LYPD5Q6UWN5 251 aa10.8□□□□□ -0.68
HDAC6-218ENST00000470942 Q6ZNX1 250 aa10.8□□□□□ -0.68
HDAC6-218ENST00000470942 TCTE3Q8IZS6 198 aa10.8□□□□□ -0.68
HDAC6-218ENST00000470942 PKD1P98161 4303 aa10.8□□□□□ -0.68
HDAC6-218ENST00000470942 B4DEV8 164 aa10.79□□□□□ -0.68
HDAC6-218ENST00000470942 SIVA1O15304 175 aa10.79□□□□□ -0.68
HDAC6-218ENST00000470942 RS1O15537 224 aa10.79□□□□□ -0.68
HDAC6-218ENST00000470942 NXPH4O95158 308 aa10.79□□□□□ -0.68
HDAC6-218ENST00000470942 RNASE3P12724 160 aaKnown RBP10.79□□□□□ -0.68
HDAC6-218ENST00000470942 ASIPP42127 132 aa10.79□□□□□ -0.68
HDAC6-218ENST00000470942 ZNF506Q5JVG8 444 aa10.79□□□□□ -0.68
HDAC6-218ENST00000470942 CFAP126Q5VTH2 177 aa10.79□□□□□ -0.68
HDAC6-218ENST00000470942 IGHV3-73A0A0B4J1V6 119 aa10.78□□□□□ -0.68
HDAC6-218ENST00000470942 TRBV6-1A0A0K0K1D8 114 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms