RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 CENPWQ5EE01 88 aa9.04□□□□□ -0.96
SPTLC1-204ENST00000469778 FAM222AQ5U5X8 452 aa9.04□□□□□ -0.96
SPTLC1-204ENST00000469778 C18orf15Q96N68 181 aa9.04□□□□□ -0.96
SPTLC1-204ENST00000469778 NDUFAF3Q9BU61 184 aa9.04□□□□□ -0.96
SPTLC1-204ENST00000469778 RAB19A4D1S5 217 aa9.03□□□□□ -0.96
SPTLC1-204ENST00000469778 IFITM2Q01629 132 aa9.03□□□□□ -0.96
SPTLC1-204ENST00000469778 MUC21Q5SSG8 566 aa9.03□□□□□ -0.96
SPTLC1-204ENST00000469778 DNLZQ5SXM8 178 aa9.03□□□□□ -0.96
SPTLC1-204ENST00000469778 C11orf72Q8NBR9 251 aa9.03□□□□□ -0.96
SPTLC1-204ENST00000469778 PTH2Q96A98 100 aa9.03□□□□□ -0.96
SPTLC1-204ENST00000469778 DAZAP1Q96EP5 407 aaKnown RBP9.03□□□□□ -0.96
SPTLC1-204ENST00000469778 DERL1Q9BUN8 251 aa9.03□□□□□ -0.96
SPTLC1-204ENST00000469778 NAGKQ9UJ70 344 aa9.03□□□□□ -0.96
SPTLC1-204ENST00000469778 SH2D1AO60880 128 aa9.02□□□□□ -0.97
SPTLC1-204ENST00000469778 ORM1P02763 201 aa9.02□□□□□ -0.97
SPTLC1-204ENST00000469778 SRP19P09132 144 aaKnown RBP9.02□□□□□ -0.97
SPTLC1-204ENST00000469778 CXCL1P09341 107 aa9.02□□□□□ -0.97
SPTLC1-204ENST00000469778 CRIP1P50238 77 aa9.02□□□□□ -0.97
SPTLC1-204ENST00000469778 LINC01559Q495D7 138 aa9.02□□□□□ -0.97
SPTLC1-204ENST00000469778 LINC00612Q8N6U2 182 aa9.02□□□□□ -0.97
SPTLC1-204ENST00000469778 PARLQ9H300 379 aa9.02□□□□□ -0.97
SPTLC1-204ENST00000469778 NOP10Q9NPE3 64 aaKnown RBP9.02□□□□□ -0.97
SPTLC1-204ENST00000469778 GSN-AS1Q9NRJ2 163 aa9.02□□□□□ -0.97
SPTLC1-204ENST00000469778 IGHV3-16A0A0C4DH30 117 aa9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 NUPR2A6NF83 97 aa9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 KRBOX1C9JBD0 128 aa9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 SPINK4O60575 86 aa9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 PRM2P04554 102 aa9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 TCTAP57738 103 aa9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 RPS20P60866 119 aaKnown RBP9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 DAD1P61803 113 aa9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 C12orf74Q32Q52 190 aa9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 PIK3CD-AS1Q5SR53 167 aa9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 PCNPQ8WW12 178 aaKnown RBP9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 RASL10AQ92737 203 aa9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 FAM210BQ96KR6 192 aa9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 KLK5Q9Y337 293 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1-204ENST00000469778 TRAV10A0A0B4J240 114 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 IGKV3D-20A0A0C4DH25 116 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 XKRY2A2RUG3 117 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 ZNF727A8MUV8 499 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 B4DEV8 164 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 M0R2P5 195 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 GNRH2O43555 120 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 CIDEAO60543 219 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 IGLV2-8P01709 118 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 TYMSP04818 313 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 ASIPP42127 132 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 NANOS2P60321 138 aaKnown RBP9□□□□□ -0.97
SPTLC1-204ENST00000469778 UQCC3Q6UW78 93 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 Q6ZQT7 251 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 SMIM7Q9BQ49 75 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 IL36BQ9NZH7 164 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 MDFICQ9P1T7 246 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 C11orf21Q9P2W6 132 aa9□□□□□ -0.97
SPTLC1-204ENST00000469778 TRBV20OR9-2A0A075B6H5 130 aa8.99□□□□□ -0.97
SPTLC1-204ENST00000469778 MED14OSP0DP75 135 aa8.99□□□□□ -0.97
SPTLC1-204ENST00000469778 MGST1P10620 155 aaKnown RBP8.99□□□□□ -0.97
SPTLC1-204ENST00000469778 S100A4P26447 101 aaKnown RBP8.99□□□□□ -0.97
SPTLC1-204ENST00000469778 SOHLH1Q5JUK2 328 aa8.99□□□□□ -0.97
SPTLC1-204ENST00000469778 CEMP1Q6PRD7 247 aaPredicted RBP8.99□□□□□ -0.97
SPTLC1-204ENST00000469778 NHLRC2Q8NBF2 726 aa8.99□□□□□ -0.97
SPTLC1-204ENST00000469778 OCC1Q8TAD7 63 aa8.99□□□□□ -0.97
SPTLC1-204ENST00000469778 PHLDA1Q8WV24 401 aaPredicted RBP8.99□□□□□ -0.97
SPTLC1-204ENST00000469778 CELA1Q9UNI1 258 aa8.99□□□□□ -0.97
SPTLC1-204ENST00000469778 C19orf71A6NCJ1 209 aa8.98□□□□□ -0.97
SPTLC1-204ENST00000469778 P01737 135 aa8.98□□□□□ -0.97
SPTLC1-204ENST00000469778 ATP5G1P05496 136 aa8.98□□□□□ -0.97
SPTLC1-204ENST00000469778 DEFB130BP0DP73 79 aa8.98□□□□□ -0.97
SPTLC1-204ENST00000469778 DEFB130AP0DP74 79 aa8.98□□□□□ -0.97
SPTLC1-204ENST00000469778 CEBPGP53567 150 aa8.98□□□□□ -0.97
SPTLC1-204ENST00000469778 OR5I1Q13606 314 aa8.98□□□□□ -0.97
SPTLC1-204ENST00000469778 TMEM241Q24JQ0 296 aa8.98□□□□□ -0.97
SPTLC1-204ENST00000469778 C9orf85Q96MD7 179 aa8.98□□□□□ -0.97
SPTLC1-204ENST00000469778 TRGV2A0A075B6R0 118 aa8.97□□□□□ -0.97
SPTLC1-204ENST00000469778 DEFB131BA0A096LNP1 70 aa8.97□□□□□ -0.97
SPTLC1-204ENST00000469778 TRGV1A0A0A0MS02 117 aa8.97□□□□□ -0.97
SPTLC1-204ENST00000469778 SLAQ13239 276 aa8.97□□□□□ -0.97
SPTLC1-204ENST00000469778 PRR27Q6MZM9 219 aa8.97□□□□□ -0.97
SPTLC1-204ENST00000469778 Q6ZTC4 211 aa8.97□□□□□ -0.97
SPTLC1-204ENST00000469778 FAM231DQ6ZW35 169 aa8.97□□□□□ -0.97
SPTLC1-204ENST00000469778 RNASE3P12724 160 aaKnown RBP8.96□□□□□ -0.98
SPTLC1-204ENST00000469778 CASC10Q5T4H9 136 aa8.96□□□□□ -0.98
SPTLC1-204ENST00000469778 Q6ZTI0 123 aa8.96□□□□□ -0.98
SPTLC1-204ENST00000469778 SYT8Q8NBV8 401 aa8.96□□□□□ -0.98
SPTLC1-204ENST00000469778 SCRT2Q9NQ03 307 aa8.96□□□□□ -0.98
SPTLC1-204ENST00000469778 NAT8Q9UHE5 227 aa8.96□□□□□ -0.98
SPTLC1-204ENST00000469778 A0A1W2PPQ1 181 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 GAGE12BA1L429 117 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 C9JQL5 133 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 F2Z2F3 143 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 M0R036 132 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 GAGE7O76087 117 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 OR5AL1P0C617 328 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 ARMS2P0C7Q2 107 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 GAGE12FP0CL80 117 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 GAGE12GP0CL81 117 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 GAGE12IP0CL82 117 aa8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 SRSF3P84103 164 aaKnown RBP8.95□□□□□ -0.98
SPTLC1-204ENST00000469778 ZNF876PQ49A33 203 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 1584.9 ms