RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SERF1AO75920 110 aa7□□□□□ -1.29
SMC1A-205ENST00000469129 OR5AL1P0C617 328 aa7□□□□□ -1.29
SMC1A-205ENST00000469129 ASIPP42127 132 aa7□□□□□ -1.29
SMC1A-205ENST00000469129 PROK1P58294 105 aa7□□□□□ -1.29
SMC1A-205ENST00000469129 DNLZQ5SXM8 178 aa7□□□□□ -1.29
SMC1A-205ENST00000469129 PRR9Q5T870 116 aa7□□□□□ -1.29
SMC1A-205ENST00000469129 ADAMTSL5Q6ZMM2 481 aa7□□□□□ -1.29
SMC1A-205ENST00000469129 SMIM15Q7Z3B0 74 aa7□□□□□ -1.29
SMC1A-205ENST00000469129 CITED2Q99967 270 aaPredicted RBP7□□□□□ -1.29
SMC1A-205ENST00000469129 SAMD10Q9BYL1 202 aa7□□□□□ -1.29
SMC1A-205ENST00000469129 SVEP1Q4LDE5 3571 aa6.99□□□□□ -1.29
SMC1A-205ENST00000469129 IGKV3D-20A0A0C4DH25 116 aa6.99□□□□□ -1.29
SMC1A-205ENST00000469129 C7orf71A4D174 169 aa6.99□□□□□ -1.29
SMC1A-205ENST00000469129 SNAI2O43623 268 aa6.99□□□□□ -1.29
SMC1A-205ENST00000469129 TWIST1Q15672 202 aa6.99□□□□□ -1.29
SMC1A-205ENST00000469129 KRTAP21-3Q3LHN1 58 aa6.99□□□□□ -1.29
SMC1A-205ENST00000469129 TMEM61Q8N0U2 210 aa6.99□□□□□ -1.29
SMC1A-205ENST00000469129 TMEM256Q8N2U0 113 aa6.99□□□□□ -1.29
SMC1A-205ENST00000469129 DUX3Q96PT4 197 aa6.99□□□□□ -1.29
SMC1A-205ENST00000469129 TMEM191AQ9H0A3 160 aa6.99□□□□□ -1.29
SMC1A-205ENST00000469129 NAGKQ9UJ70 344 aa6.99□□□□□ -1.29
SMC1A-205ENST00000469129 TP53TG3Q9ULZ0 132 aa6.99□□□□□ -1.29
SMC1A-205ENST00000469129 J3KRW8 73 aa6.98□□□□□ -1.29
SMC1A-205ENST00000469129 S100A4P26447 101 aaKnown RBP6.98□□□□□ -1.29
SMC1A-205ENST00000469129 RNASE4P34096 147 aaKnown RBP6.98□□□□□ -1.29
SMC1A-205ENST00000469129 CDKN1BP46527 198 aa6.98□□□□□ -1.29
SMC1A-205ENST00000469129 CMC4P56277 68 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-205ENST00000469129 DEFB114Q30KQ6 69 aa6.98□□□□□ -1.29
SMC1A-205ENST00000469129 FAM104BQ5XKR9 115 aa6.98□□□□□ -1.29
SMC1A-205ENST00000469129 FAM159AQ6UWV7 190 aa6.98□□□□□ -1.29
SMC1A-205ENST00000469129 NDUFA11Q86Y39 141 aa6.98□□□□□ -1.29
SMC1A-205ENST00000469129 C11orf44Q8N8P7 122 aa6.98□□□□□ -1.29
SMC1A-205ENST00000469129 OR2K2Q8NGT1 345 aa6.98□□□□□ -1.29
SMC1A-205ENST00000469129 CHCHD1Q96BP2 118 aaKnown RBP6.98□□□□□ -1.29
SMC1A-205ENST00000469129 C11orf21Q9P2W6 132 aa6.98□□□□□ -1.29
SMC1A-205ENST00000469129 SELENOKQ9Y6D0 94 aa6.98□□□□□ -1.29
SMC1A-205ENST00000469129 JMJD1CQ15652 2540 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 IGHV4-4A0A075B6R2 117 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 A8MTW9 85 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 H3BVH4 76 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 ZNF324O75467 553 aaPredicted RBP6.97□□□□□ -1.29
SMC1A-205ENST00000469129 HSBP1O75506 76 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 PPBPP02775 128 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 HLA-DRB4P13762 266 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 RAB4AP20338 218 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 PMCHP20382 165 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 NTF3P20783 257 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 LINC00310P59036 64 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 DEFB1P60022 68 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 SPANXN1Q5VSR9 72 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 RNASEKQ6P5S7 137 aaKnown RBP6.97□□□□□ -1.29
SMC1A-205ENST00000469129 PRIMA1Q86XR5 153 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 ORMDL3Q8N138 153 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 MAP6D1Q9H9H5 199 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 LAMTOR2Q9Y2Q5 125 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 HLA-DRB4X5D2U9 266 aa6.97□□□□□ -1.29
SMC1A-205ENST00000469129 CD33P20138 364 aa6.96□□□□□ -1.3
SMC1A-205ENST00000469129 AMTP48728 403 aa6.96□□□□□ -1.3
SMC1A-205ENST00000469129 DEFB131AP59861 70 aa6.96□□□□□ -1.3
SMC1A-205ENST00000469129 IQCJQ1A5X6 159 aa6.96□□□□□ -1.3
SMC1A-205ENST00000469129 ANXA2RQ3ZCQ2 193 aa6.96□□□□□ -1.3
SMC1A-205ENST00000469129 CD300EQ496F6 205 aaPredicted RBP6.96□□□□□ -1.3
SMC1A-205ENST00000469129 PYY3Q5JQD4 70 aa6.96□□□□□ -1.3
SMC1A-205ENST00000469129 RCHY1Q96PM5 261 aa6.96□□□□□ -1.3
SMC1A-205ENST00000469129 PHLDA3Q9Y5J5 127 aa6.96□□□□□ -1.3
SMC1A-205ENST00000469129 U3KQK5 164 aa6.96□□□□□ -1.3
SMC1A-205ENST00000469129 TRGV11A0A075B6L2 103 aa6.95□□□□□ -1.3
SMC1A-205ENST00000469129 SAP30O75446 220 aa6.95□□□□□ -1.3
SMC1A-205ENST00000469129 PF4P02776 101 aa6.95□□□□□ -1.3
SMC1A-205ENST00000469129 JOSD1Q15040 202 aaPredicted RBP6.95□□□□□ -1.3
SMC1A-205ENST00000469129 NSUN5P1Q3KNT7 163 aa6.95□□□□□ -1.3
SMC1A-205ENST00000469129 TDRG1Q3Y452 100 aa6.95□□□□□ -1.3
SMC1A-205ENST00000469129 MRPL51Q4U2R6 128 aaKnown RBP6.95□□□□□ -1.3
SMC1A-205ENST00000469129 MUC21Q5SSG8 566 aa6.95□□□□□ -1.3
SMC1A-205ENST00000469129 AMN1Q8IY45 258 aa6.95□□□□□ -1.3
SMC1A-205ENST00000469129 OR10AG1Q8NH19 301 aa6.95□□□□□ -1.3
SMC1A-205ENST00000469129 PRELID3AQ96N28 172 aa6.95□□□□□ -1.3
SMC1A-205ENST00000469129 CLUHP3Q96NS8 147 aa6.95□□□□□ -1.3
SMC1A-205ENST00000469129 AP1S3Q96PC3 154 aa6.95□□□□□ -1.3
SMC1A-205ENST00000469129 CUBNO60494 3623 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 TRAV12-3A0A0B4J271 114 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 ADARB2-AS1A8MUL3 147 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 D6R8Y8 96 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 M0R2Z0 102 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 NUPR1O60356 82 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 CKS2P33552 79 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 SPINK13Q1W4C9 94 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 AMTNQ6UX39 209 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 FA2HQ7L5A8 372 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 ZNF575Q86XF7 245 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 C20orf144Q9BQM9 153 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 NIT2Q9NQR4 276 aa6.94□□□□□ -1.3
SMC1A-205ENST00000469129 AGRNO00468 2067 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 IGHV1OR15-1A0A075B7D0 117 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 MUC21A0A0G2JKD1 596 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 MUC21A0A140T8X8 626 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 OR11H12B2RN74 326 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 H3BMM0 161 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 NXPH4O95158 308 aa6.93□□□□□ -1.3
SMC1A-205ENST00000469129 IGKV3-20P01619 116 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms