RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SLAQ13239 276 aa11.82□□□□□ -0.52
SSBP1-207ENST00000468267 FHL2Q14192 279 aa11.82□□□□□ -0.52
SSBP1-207ENST00000468267 NDFIP1Q9BT67 221 aa11.82□□□□□ -0.52
SSBP1-207ENST00000468267 UPK3BQ9BT76 320 aa11.82□□□□□ -0.52
SSBP1-207ENST00000468267 PRO0255Q9UI72 69 aa11.82□□□□□ -0.52
SSBP1-207ENST00000468267 IGHV3-16A0A0C4DH30 117 aa11.81□□□□□ -0.52
SSBP1-207ENST00000468267 IGLV2-11P01706 119 aa11.81□□□□□ -0.52
SSBP1-207ENST00000468267 SMCPP49901 116 aaPredicted RBP11.81□□□□□ -0.52
SSBP1-207ENST00000468267 AKR1C8PQ5T2L2 129 aa11.81□□□□□ -0.52
SSBP1-207ENST00000468267 IQCF2Q8IXL9 164 aa11.81□□□□□ -0.52
SSBP1-207ENST00000468267 KCNS1Q96KK3 526 aa11.81□□□□□ -0.52
SSBP1-207ENST00000468267 PSG8Q9UQ74 426 aa11.81□□□□□ -0.52
SSBP1-207ENST00000468267 HHLA3Q9XRX5 114 aa11.81□□□□□ -0.52
SSBP1-207ENST00000468267 MRPS16Q9Y3D3 137 aaKnown RBP11.81□□□□□ -0.52
SSBP1-207ENST00000468267 SMLR1H3BR10 107 aa11.8□□□□□ -0.52
SSBP1-207ENST00000468267 CRYBA4P53673 196 aa11.8□□□□□ -0.52
SSBP1-207ENST00000468267 CYB561D1Q8N8Q1 229 aa11.8□□□□□ -0.52
SSBP1-207ENST00000468267 C8orf49Q96NF6 230 aa11.8□□□□□ -0.52
SSBP1-207ENST00000468267 SDF2L1Q9HCN8 221 aa11.8□□□□□ -0.52
SSBP1-207ENST00000468267 ICOSQ9Y6W8 199 aa11.8□□□□□ -0.52
SSBP1-207ENST00000468267 KIAA1109Q2LD37 5005 aa11.8□□□□□ -0.52
SSBP1-207ENST00000468267 FBLL1A6NHQ2 334 aaKnown RBP11.79□□□□□ -0.52
SSBP1-207ENST00000468267 M0R2P5 195 aa11.79□□□□□ -0.52
SSBP1-207ENST00000468267 TYMSP04818 313 aa11.79□□□□□ -0.52
SSBP1-207ENST00000468267 ZNF80P51504 273 aaPredicted RBP11.79□□□□□ -0.52
SSBP1-207ENST00000468267 FLI1Q01543 452 aaPredicted RBP11.79□□□□□ -0.52
SSBP1-207ENST00000468267 C6orf223Q8N319 242 aa11.79□□□□□ -0.52
SSBP1-207ENST00000468267 TMEM75Q8N9X5 138 aa11.79□□□□□ -0.52
SSBP1-207ENST00000468267 ZNF479Q96JC4 524 aa11.79□□□□□ -0.52
SSBP1-207ENST00000468267 TRGV4A0A0C4DH28 118 aa11.78□□□□□ -0.52
SSBP1-207ENST00000468267 SFTA3P0C7M3 94 aa11.78□□□□□ -0.52
SSBP1-207ENST00000468267 FGF8P55075 233 aaPredicted RBP11.78□□□□□ -0.52
SSBP1-207ENST00000468267 PRNTQ86SH4 94 aa11.78□□□□□ -0.52
SSBP1-207ENST00000468267 C11orf21Q9P2W6 132 aa11.78□□□□□ -0.52
SSBP1-207ENST00000468267 GCGP01275 180 aa11.77□□□□□ -0.53
SSBP1-207ENST00000468267 IFNA7P01567 189 aa11.77□□□□□ -0.53
SSBP1-207ENST00000468267 UBE2G2P60604 165 aa11.77□□□□□ -0.53
SSBP1-207ENST00000468267 SMUG1Q53HV7 270 aa11.77□□□□□ -0.53
SSBP1-207ENST00000468267 TTC32Q5I0X7 151 aa11.77□□□□□ -0.53
SSBP1-207ENST00000468267 KCNRGQ8N5I3 272 aa11.77□□□□□ -0.53
SSBP1-207ENST00000468267 LINC00479Q96M42 142 aa11.77□□□□□ -0.53
SSBP1-207ENST00000468267 NKX6-2Q9C056 277 aaPredicted RBP11.77□□□□□ -0.53
SSBP1-207ENST00000468267 TRAV4A0A0B4J268 109 aa11.76□□□□□ -0.53
SSBP1-207ENST00000468267 FAM74A7A6NL05 159 aa11.76□□□□□ -0.53
SSBP1-207ENST00000468267 HMSDA8MTL9 139 aa11.76□□□□□ -0.53
SSBP1-207ENST00000468267 PFN1P07737 140 aaKnown RBP11.76□□□□□ -0.53
SSBP1-207ENST00000468267 ZNF345Q14585 488 aa11.76□□□□□ -0.53
SSBP1-207ENST00000468267 MRPL23Q16540 153 aaKnown RBP11.76□□□□□ -0.53
SSBP1-207ENST00000468267 ZFP69Q49AA0 526 aa11.76□□□□□ -0.53
SSBP1-207ENST00000468267 SAPCD1Q5SSQ6 148 aa11.76□□□□□ -0.53
SSBP1-207ENST00000468267 KRTAP1-5Q9BYS1 174 aa11.76□□□□□ -0.53
SSBP1-207ENST00000468267 TRAV34A0A0B4J273 112 aa11.75□□□□□ -0.53
SSBP1-207ENST00000468267 A0A1W2PPQ1 181 aa11.75□□□□□ -0.53
SSBP1-207ENST00000468267 MAP1LC3B2A6NCE7 125 aa11.75□□□□□ -0.53
SSBP1-207ENST00000468267 TNP2Q05952 138 aa11.75□□□□□ -0.53
SSBP1-207ENST00000468267 OR4C5Q8NGB2 326 aa11.75□□□□□ -0.53
SSBP1-207ENST00000468267 OR11H4Q8NGC9 324 aa11.75□□□□□ -0.53
SSBP1-207ENST00000468267 MAP1LC3BQ9GZQ8 125 aa11.75□□□□□ -0.53
SSBP1-207ENST00000468267 PEX7O00628 323 aa11.74□□□□□ -0.53
SSBP1-207ENST00000468267 PPT1P50897 306 aa11.74□□□□□ -0.53
SSBP1-207ENST00000468267 LYPD5Q6UWN5 251 aa11.74□□□□□ -0.53
SSBP1-207ENST00000468267 HIST1H2BAQ96A08 127 aa11.74□□□□□ -0.53
SSBP1-207ENST00000468267 A0A0D9SG52 128 aa11.73□□□□□ -0.53
SSBP1-207ENST00000468267 K7EQD1 137 aa11.73□□□□□ -0.53
SSBP1-207ENST00000468267 NEGR1Q7Z3B1 354 aa11.73□□□□□ -0.53
SSBP1-207ENST00000468267 ARL2-SNX15V9GYD0 113 aa11.73□□□□□ -0.53
SSBP1-207ENST00000468267 SIVA1O15304 175 aa11.72□□□□□ -0.53
SSBP1-207ENST00000468267 NXPH4O95158 308 aa11.72□□□□□ -0.53
SSBP1-207ENST00000468267 ORM1P02763 201 aa11.72□□□□□ -0.53
SSBP1-207ENST00000468267 SEC11BP0C7V7 166 aa11.72□□□□□ -0.53
SSBP1-207ENST00000468267 GYPEP15421 78 aa11.72□□□□□ -0.53
SSBP1-207ENST00000468267 FHITP49789 147 aa11.72□□□□□ -0.53
SSBP1-207ENST00000468267 ZNF876PQ49A33 203 aa11.72□□□□□ -0.53
SSBP1-207ENST00000468267 STOML3Q8TAV4 291 aa11.72□□□□□ -0.53
SSBP1-207ENST00000468267 C9orf85Q96MD7 179 aa11.72□□□□□ -0.53
SSBP1-207ENST00000468267 C9JCJ5 164 aa11.71□□□□□ -0.53
SSBP1-207ENST00000468267 BTF3P20290 206 aaKnown RBP11.71□□□□□ -0.53
SSBP1-207ENST00000468267 SRIP30626 198 aa11.71□□□□□ -0.53
SSBP1-207ENST00000468267 Q86TA4 180 aa11.71□□□□□ -0.53
SSBP1-207ENST00000468267 PCNPQ8WW12 178 aaKnown RBP11.71□□□□□ -0.53
SSBP1-207ENST00000468267 PTH2Q96A98 100 aa11.71□□□□□ -0.53
SSBP1-207ENST00000468267 KANTRA0A1W2PQU2 76 aa11.7□□□□□ -0.54
SSBP1-207ENST00000468267 FABP5P3A8MUU1 101 aa11.7□□□□□ -0.54
SSBP1-207ENST00000468267 UMAD1C9J7I0 102 aa11.7□□□□□ -0.54
SSBP1-207ENST00000468267 BCL2L11O43521 198 aa11.7□□□□□ -0.54
SSBP1-207ENST00000468267 RNASE3P12724 160 aaKnown RBP11.7□□□□□ -0.54
SSBP1-207ENST00000468267 GATA1P15976 413 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-207ENST00000468267 MBD3L1Q8WWY6 194 aa11.7□□□□□ -0.54
SSBP1-207ENST00000468267 TCEAL7Q9BRU2 100 aa11.7□□□□□ -0.54
SSBP1-207ENST00000468267 ZNF471Q9BX82 626 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-207ENST00000468267 IGKV3D-20A0A0C4DH25 116 aa11.69□□□□□ -0.54
SSBP1-207ENST00000468267 RS1O15537 224 aa11.69□□□□□ -0.54
SSBP1-207ENST00000468267 MED14OSP0DP75 135 aa11.69□□□□□ -0.54
SSBP1-207ENST00000468267 CFAP126Q5VTH2 177 aa11.69□□□□□ -0.54
SSBP1-207ENST00000468267 CST9LP1Q5W188 147 aa11.69□□□□□ -0.54
SSBP1-207ENST00000468267 DPPA3Q6W0C5 159 aa11.69□□□□□ -0.54
SSBP1-207ENST00000468267 COX8CQ7Z4L0 72 aa11.69□□□□□ -0.54
SSBP1-207ENST00000468267 TXNDC17Q9BRA2 123 aa11.69□□□□□ -0.54
SSBP1-207ENST00000468267 ZFP30Q9Y2G7 519 aa11.69□□□□□ -0.54
SSBP1-207ENST00000468267 LRP1BQ9NZR2 4599 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms