RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 FAM74A1Q5RGS3 127 aa16.57■□□□□ 0.24
PTCH1-210ENST00000468211 OR4C5Q8NGB2 326 aa16.57■□□□□ 0.24
PTCH1-210ENST00000468211 PCNPQ8WW12 178 aaKnown RBP16.57■□□□□ 0.24
PTCH1-210ENST00000468211 TREM1Q9NP99 234 aa16.57■□□□□ 0.24
PTCH1-210ENST00000468211 A0A087WTM6 91 aa16.56■□□□□ 0.24
PTCH1-210ENST00000468211 TRAV21A0A0B4J279 112 aa16.56■□□□□ 0.24
PTCH1-210ENST00000468211 NFE4Q86UQ8 179 aa16.56■□□□□ 0.24
PTCH1-210ENST00000468211 ARL6IP6Q8N6S5 226 aa16.56■□□□□ 0.24
PTCH1-210ENST00000468211 OR10G9Q8NGN4 311 aa16.56■□□□□ 0.24
PTCH1-210ENST00000468211 OR10G7Q8NGN6 311 aa16.56■□□□□ 0.24
PTCH1-210ENST00000468211 ARL14EPLP0DKL9 152 aa16.55■□□□□ 0.24
PTCH1-210ENST00000468211 MSRB1Q9NZV6 116 aa16.55■□□□□ 0.24
PTCH1-210ENST00000468211 TRAV9-2A0A087WT02 112 aa16.54■□□□□ 0.24
PTCH1-210ENST00000468211 C9JCJ5 164 aa16.54■□□□□ 0.24
PTCH1-210ENST00000468211 EREGO14944 169 aa16.54■□□□□ 0.24
PTCH1-210ENST00000468211 TXNDC17Q9BRA2 123 aa16.54■□□□□ 0.24
PTCH1-210ENST00000468211 C11orf21Q9P2W6 132 aa16.54■□□□□ 0.24
PTCH1-210ENST00000468211 ZNF80P51504 273 aaPredicted RBP16.53■□□□□ 0.24
PTCH1-210ENST00000468211 XGP55808 180 aa16.53■□□□□ 0.24
PTCH1-210ENST00000468211 SDF2L1Q9HCN8 221 aa16.53■□□□□ 0.24
PTCH1-210ENST00000468211 GATA1P15976 413 aaPredicted RBP16.52■□□□□ 0.24
PTCH1-210ENST00000468211 EVI2AP22794 236 aa16.52■□□□□ 0.24
PTCH1-210ENST00000468211 HSD17B11Q8NBQ5 300 aa16.52■□□□□ 0.24
PTCH1-210ENST00000468211 ASB13Q8WXK3 278 aa16.52■□□□□ 0.24
PTCH1-210ENST00000468211 ALG5Q9Y673 324 aa16.52■□□□□ 0.24
PTCH1-210ENST00000468211 STAG3L2P0CL84 134 aa16.51■□□□□ 0.23
PTCH1-210ENST00000468211 STAG3L3P0CL85 134 aa16.51■□□□□ 0.23
PTCH1-210ENST00000468211 CDC34P49427 236 aaPredicted RBP16.51■□□□□ 0.23
PTCH1-210ENST00000468211 KRTAP10-1P60331 282 aa16.51■□□□□ 0.23
PTCH1-210ENST00000468211 CDPF1Q6NVV7 123 aa16.51■□□□□ 0.23
PTCH1-210ENST00000468211 DPPA3Q6W0C5 159 aa16.5■□□□□ 0.23
PTCH1-210ENST00000468211 KCNS1Q96KK3 526 aa16.5■□□□□ 0.23
PTCH1-210ENST00000468211 K7EP13 123 aa16.49■□□□□ 0.23
PTCH1-210ENST00000468211 TCRAP04437 139 aa16.49■□□□□ 0.23
PTCH1-210ENST00000468211 CRYGDP07320 174 aa16.49■□□□□ 0.23
PTCH1-210ENST00000468211 TMEM75Q8N9X5 138 aa16.49■□□□□ 0.23
PTCH1-210ENST00000468211 NHLRC2Q8NBF2 726 aa16.49■□□□□ 0.23
PTCH1-210ENST00000468211 OR2G3Q8NGZ4 309 aa16.49■□□□□ 0.23
PTCH1-210ENST00000468211 SUN5Q8TC36 379 aa16.49■□□□□ 0.23
PTCH1-210ENST00000468211 RAB24Q969Q5 203 aa16.49■□□□□ 0.23
PTCH1-210ENST00000468211 FAT1Q14517 4588 aa16.48■□□□□ 0.23
PTCH1-210ENST00000468211 IGLV2-11P01706 119 aa16.48■□□□□ 0.23
PTCH1-210ENST00000468211 GCHFRP30047 84 aa16.48■□□□□ 0.23
PTCH1-210ENST00000468211 C5orf17Q8NAS9 161 aa16.48■□□□□ 0.23
PTCH1-210ENST00000468211 ATP6V0CP27449 155 aa16.47■□□□□ 0.23
PTCH1-210ENST00000468211 ZNF876PQ49A33 203 aa16.47■□□□□ 0.23
PTCH1-210ENST00000468211 CFAP126Q5VTH2 177 aa16.47■□□□□ 0.23
PTCH1-210ENST00000468211 SLC25A29Q8N8R3 303 aa16.47■□□□□ 0.23
PTCH1-210ENST00000468211 PSG8Q9UQ74 426 aa16.47■□□□□ 0.23
PTCH1-210ENST00000468211 IGHV3-73A0A0B4J1V6 119 aa16.46■□□□□ 0.23
PTCH1-210ENST00000468211 FBLL1A6NHQ2 334 aaKnown RBP16.46■□□□□ 0.23
PTCH1-210ENST00000468211 EPM2AB3EWF7 344 aa16.46■□□□□ 0.23
PTCH1-210ENST00000468211 GGTLC3B5MD39 225 aa16.46■□□□□ 0.23
PTCH1-210ENST00000468211 RS1O15537 224 aa16.46■□□□□ 0.23
PTCH1-210ENST00000468211 GCGP01275 180 aa16.46■□□□□ 0.23
PTCH1-210ENST00000468211 TIRAPP58753 221 aa16.46■□□□□ 0.23
PTCH1-210ENST00000468211 Q5BKY6 102 aa16.46■□□□□ 0.23
PTCH1-210ENST00000468211 AQP10Q96PS8 301 aa16.46■□□□□ 0.23
PTCH1-210ENST00000468211 NDFIP1Q9BT67 221 aa16.46■□□□□ 0.23
PTCH1-210ENST00000468211 PSMG3Q9BT73 122 aaPredicted RBP16.46■□□□□ 0.23
PTCH1-210ENST00000468211 SH3BGRL3Q9H299 93 aa16.46■□□□□ 0.23
PTCH1-210ENST00000468211 IGHV3-38A0A0C4DH36 116 aa16.45■□□□□ 0.22
PTCH1-210ENST00000468211 SERTM2A0A1B0GWG4 89 aa16.45■□□□□ 0.22
PTCH1-210ENST00000468211 SH2D6Q7Z4S9 175 aa16.45■□□□□ 0.22
PTCH1-210ENST00000468211 C9orf85Q96MD7 179 aa16.45■□□□□ 0.22
PTCH1-210ENST00000468211 PGPEP1LA6NFU8 196 aa16.44■□□□□ 0.22
PTCH1-210ENST00000468211 PPT1P50897 306 aa16.44■□□□□ 0.22
PTCH1-210ENST00000468211 SUMO1P63165 101 aaKnown RBP16.44■□□□□ 0.22
PTCH1-210ENST00000468211 TAAR5O14804 337 aa16.43■□□□□ 0.22
PTCH1-210ENST00000468211 FLI1Q01543 452 aaPredicted RBP16.43■□□□□ 0.22
PTCH1-210ENST00000468211 PRNTQ86SH4 94 aa16.43■□□□□ 0.22
PTCH1-210ENST00000468211 C10orf126Q8N4M7 172 aa16.43■□□□□ 0.22
PTCH1-210ENST00000468211 EPDR1Q9UM22 224 aa16.43■□□□□ 0.22
PTCH1-210ENST00000468211 PFN1P07737 140 aaKnown RBP16.42■□□□□ 0.22
PTCH1-210ENST00000468211 RNASE3P12724 160 aaKnown RBP16.42■□□□□ 0.22
PTCH1-210ENST00000468211 LINC01556Q5JQF7 62 aa16.42■□□□□ 0.22
PTCH1-210ENST00000468211 ZNF506Q5JVG8 444 aa16.42■□□□□ 0.22
PTCH1-210ENST00000468211 VPS13BQ7Z7G8 4022 aa16.42■□□□□ 0.22
PTCH1-210ENST00000468211 TRBV6-4A0A1B0GX49 114 aa16.41■□□□□ 0.22
PTCH1-210ENST00000468211 LRCOL1A6NCL2 159 aa16.41■□□□□ 0.22
PTCH1-210ENST00000468211 K7EQM0 130 aa16.4■□□□□ 0.22
PTCH1-210ENST00000468211 SERF2P84101 59 aa16.4■□□□□ 0.22
PTCH1-210ENST00000468211 SMUG1Q53HV7 270 aa16.4■□□□□ 0.22
PTCH1-210ENST00000468211 CYB561D1Q8N8Q1 229 aa16.4■□□□□ 0.22
PTCH1-210ENST00000468211 LINC00479Q96M42 142 aa16.4■□□□□ 0.22
PTCH1-210ENST00000468211 MED28Q9H204 178 aa16.4■□□□□ 0.22
PTCH1-210ENST00000468211 HERC1Q15751 4861 aa16.39■□□□□ 0.21
PTCH1-210ENST00000468211 IBA57-AS1B1ANH7 110 aa16.39■□□□□ 0.21
PTCH1-210ENST00000468211 CXorf1O96002 111 aa16.39■□□□□ 0.21
PTCH1-210ENST00000468211 MBP02144 154 aa16.39■□□□□ 0.21
PTCH1-210ENST00000468211 GCSHP23434 173 aa16.39■□□□□ 0.21
PTCH1-210ENST00000468211 RHOHQ15669 191 aa16.39■□□□□ 0.21
PTCH1-210ENST00000468211 Q6ZSN1 163 aa16.39■□□□□ 0.21
PTCH1-210ENST00000468211 PRADC1Q9BSG0 188 aa16.39■□□□□ 0.21
PTCH1-210ENST00000468211 TMEM167BQ9NRX6 74 aa16.39■□□□□ 0.21
PTCH1-210ENST00000468211 TNFSF18Q9UNG2 199 aa16.39■□□□□ 0.21
PTCH1-210ENST00000468211 TRAV34A0A0B4J273 112 aa16.38■□□□□ 0.21
PTCH1-210ENST00000468211 HAMPP81172 84 aa16.38■□□□□ 0.21
PTCH1-210ENST00000468211 ZNF726P1Q15940 193 aa16.38■□□□□ 0.21
PTCH1-210ENST00000468211 OR10J3Q5JRS4 329 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms