RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 IGHV3-16A0A0C4DH30 117 aa17.76■□□□□ 0.43
U2AF1-206ENST00000464750 CXorf1O96002 111 aa17.76■□□□□ 0.43
U2AF1-206ENST00000464750 TYMSP04818 313 aa17.76■□□□□ 0.43
U2AF1-206ENST00000464750 MRPL23Q16540 153 aaKnown RBP17.76■□□□□ 0.43
U2AF1-206ENST00000464750 RPL7L1Q6DKI1 246 aaKnown RBP17.76■□□□□ 0.43
U2AF1-206ENST00000464750 ACTR3CQ9C0K3 210 aaPredicted RBP17.76■□□□□ 0.43
U2AF1-206ENST00000464750 TMEM167BQ9NRX6 74 aa17.76■□□□□ 0.43
U2AF1-206ENST00000464750 TNFSF18Q9UNG2 199 aa17.76■□□□□ 0.43
U2AF1-206ENST00000464750 C16orf90A8MZG2 172 aa17.75■□□□□ 0.43
U2AF1-206ENST00000464750 SIVA1O15304 175 aa17.75■□□□□ 0.43
U2AF1-206ENST00000464750 NXPH4O95158 308 aa17.75■□□□□ 0.43
U2AF1-206ENST00000464750 SDF2L1Q9HCN8 221 aa17.75■□□□□ 0.43
U2AF1-206ENST00000464750 BORCS7-ASMTA0A0B4J1R7 106 aa17.74■□□□□ 0.43
U2AF1-206ENST00000464750 GGTLC3B5MD39 225 aa17.74■□□□□ 0.43
U2AF1-206ENST00000464750 K7EQM0 130 aa17.74■□□□□ 0.43
U2AF1-206ENST00000464750 M0R2P5 195 aa17.74■□□□□ 0.43
U2AF1-206ENST00000464750 IQCF2Q8IXL9 164 aa17.74■□□□□ 0.43
U2AF1-206ENST00000464750 OR2T35Q8NGX2 323 aa17.74■□□□□ 0.43
U2AF1-206ENST00000464750 KCNS1Q96KK3 526 aa17.74■□□□□ 0.43
U2AF1-206ENST00000464750 TRAV4A0A0B4J268 109 aa17.73■□□□□ 0.43
U2AF1-206ENST00000464750 BTF3P20290 206 aaKnown RBP17.73■□□□□ 0.43
U2AF1-206ENST00000464750 PSG8Q9UQ74 426 aa17.73■□□□□ 0.43
U2AF1-206ENST00000464750 SRIP30626 198 aa17.72■□□□□ 0.43
U2AF1-206ENST00000464750 SUMO1P63165 101 aaKnown RBP17.72■□□□□ 0.43
U2AF1-206ENST00000464750 LYPD5Q6UWN5 251 aa17.72■□□□□ 0.43
U2AF1-206ENST00000464750 NEGR1Q7Z3B1 354 aa17.72■□□□□ 0.43
U2AF1-206ENST00000464750 PCNPQ8WW12 178 aaKnown RBP17.72■□□□□ 0.43
U2AF1-206ENST00000464750 K7EQD1 137 aa17.71■□□□□ 0.43
U2AF1-206ENST00000464750 ZNF80P51504 273 aaPredicted RBP17.71■□□□□ 0.43
U2AF1-206ENST00000464750 LINC00315P59091 139 aa17.71■□□□□ 0.43
U2AF1-206ENST00000464750 RGS21Q2M5E4 152 aa17.71■□□□□ 0.43
U2AF1-206ENST00000464750 CYB561D1Q8N8Q1 229 aa17.71■□□□□ 0.43
U2AF1-206ENST00000464750 OR4C5Q8NGB2 326 aa17.71■□□□□ 0.43
U2AF1-206ENST00000464750 EPDR1Q9UM22 224 aa17.71■□□□□ 0.43
U2AF1-206ENST00000464750 IGLV2-11P01706 119 aa17.7■□□□□ 0.42
U2AF1-206ENST00000464750 GYPEP15421 78 aa17.7■□□□□ 0.42
U2AF1-206ENST00000464750 FLI1Q01543 452 aaPredicted RBP17.7■□□□□ 0.42
U2AF1-206ENST00000464750 HSPG2P98160 4391 aa17.69■□□□□ 0.42
U2AF1-206ENST00000464750 G3V3Q6 166 aa17.69■□□□□ 0.42
U2AF1-206ENST00000464750 GCGP01275 180 aa17.69■□□□□ 0.42
U2AF1-206ENST00000464750 ORM1P02763 201 aa17.69■□□□□ 0.42
U2AF1-206ENST00000464750 ZNF726P1Q15940 193 aa17.69■□□□□ 0.42
U2AF1-206ENST00000464750 PRNTQ86SH4 94 aa17.69■□□□□ 0.42
U2AF1-206ENST00000464750 TMEM75Q8N9X5 138 aa17.69■□□□□ 0.42
U2AF1-206ENST00000464750 C11orf21Q9P2W6 132 aa17.69■□□□□ 0.42
U2AF1-206ENST00000464750 CTXND1A0A1B0GTU2 59 aa17.68■□□□□ 0.42
U2AF1-206ENST00000464750 ZFP69Q49AA0 526 aa17.68■□□□□ 0.42
U2AF1-206ENST00000464750 A0A1W2PRE2 83 aa17.67■□□□□ 0.42
U2AF1-206ENST00000464750 C9JCJ5 164 aa17.67■□□□□ 0.42
U2AF1-206ENST00000464750 TAAR5O14804 337 aa17.67■□□□□ 0.42
U2AF1-206ENST00000464750 SMUG1Q53HV7 270 aa17.67■□□□□ 0.42
U2AF1-206ENST00000464750 SPATA12Q7Z6I5 190 aa17.67■□□□□ 0.42
U2AF1-206ENST00000464750 DNAH5Q8TE73 4624 aa17.67■□□□□ 0.42
U2AF1-206ENST00000464750 PFN1P07737 140 aaKnown RBP17.66■□□□□ 0.42
U2AF1-206ENST00000464750 FBLL1A6NHQ2 334 aaKnown RBP17.65■□□□□ 0.42
U2AF1-206ENST00000464750 ARPC5O15511 151 aa17.65■□□□□ 0.42
U2AF1-206ENST00000464750 AKR1C8PQ5T2L2 129 aa17.65■□□□□ 0.42
U2AF1-206ENST00000464750 TXNDC17Q9BRA2 123 aa17.65■□□□□ 0.42
U2AF1-206ENST00000464750 UBE2G2P60604 165 aa17.64■□□□□ 0.41
U2AF1-206ENST00000464750 Q6ZRN7 208 aaPredicted RBP17.64■□□□□ 0.41
U2AF1-206ENST00000464750 ABCA13Q86UQ4 5058 aa17.63■□□□□ 0.41
U2AF1-206ENST00000464750 LOC100131303A0A0U1RQF7 123 aa17.63■□□□□ 0.41
U2AF1-206ENST00000464750 GATA1P15976 413 aaPredicted RBP17.63■□□□□ 0.41
U2AF1-206ENST00000464750 FGF8P55075 233 aaPredicted RBP17.63■□□□□ 0.41
U2AF1-206ENST00000464750 ZNF876PQ49A33 203 aa17.63■□□□□ 0.41
U2AF1-206ENST00000464750 SAPCD1Q5SSQ6 148 aa17.63■□□□□ 0.41
U2AF1-206ENST00000464750 WFDC10BQ8IUB3 73 aa17.63■□□□□ 0.41
U2AF1-206ENST00000464750 APOBP04114 4563 aaKnown RBP17.63■□□□□ 0.41
U2AF1-206ENST00000464750 TRAV34A0A0B4J273 112 aa17.62■□□□□ 0.41
U2AF1-206ENST00000464750 IFNA7P01567 189 aa17.62■□□□□ 0.41
U2AF1-206ENST00000464750 LINC00479Q96M42 142 aa17.62■□□□□ 0.41
U2AF1-206ENST00000464750 C9orf85Q96MD7 179 aa17.62■□□□□ 0.41
U2AF1-206ENST00000464750 LY96Q9Y6Y9 160 aa17.62■□□□□ 0.41
U2AF1-206ENST00000464750 CYTL1Q9NRR1 136 aa17.61■□□□□ 0.41
U2AF1-206ENST00000464750 ARL2-SNX15V9GYD0 113 aa17.61■□□□□ 0.41
U2AF1-206ENST00000464750 PEX7O00628 323 aa17.6■□□□□ 0.41
U2AF1-206ENST00000464750 PPT1P50897 306 aa17.6■□□□□ 0.41
U2AF1-206ENST00000464750 KRTAP10-2P60368 255 aa17.6■□□□□ 0.41
U2AF1-206ENST00000464750 DPPA3Q6W0C5 159 aa17.6■□□□□ 0.41
U2AF1-206ENST00000464750 NHLRC2Q8NBF2 726 aa17.6■□□□□ 0.41
U2AF1-206ENST00000464750 FAM74A7A6NL05 159 aa17.59■□□□□ 0.41
U2AF1-206ENST00000464750 SMLR1H3BR10 107 aa17.59■□□□□ 0.41
U2AF1-206ENST00000464750 RS1O15537 224 aa17.59■□□□□ 0.41
U2AF1-206ENST00000464750 CDK2AP2O75956 126 aa17.59■□□□□ 0.41
U2AF1-206ENST00000464750 CFAP126Q5VTH2 177 aa17.59■□□□□ 0.41
U2AF1-206ENST00000464750 Q86TA4 180 aa17.59■□□□□ 0.41
U2AF1-206ENST00000464750 TNFRSF18Q9Y5U5 241 aa17.59■□□□□ 0.41
U2AF1-206ENST00000464750 TRAV9-2A0A087WT02 112 aa17.58■□□□□ 0.4
U2AF1-206ENST00000464750 MAP1LC3B2A6NCE7 125 aa17.58■□□□□ 0.4
U2AF1-206ENST00000464750 RNASE3P12724 160 aaKnown RBP17.58■□□□□ 0.4
U2AF1-206ENST00000464750 ZNF506Q5JVG8 444 aa17.58■□□□□ 0.4
U2AF1-206ENST00000464750 SH2D6Q7Z4S9 175 aa17.58■□□□□ 0.4
U2AF1-206ENST00000464750 MAP1LC3BQ9GZQ8 125 aa17.58■□□□□ 0.4
U2AF1-206ENST00000464750 SLC25A29Q8N8R3 303 aa17.57■□□□□ 0.4
U2AF1-206ENST00000464750 NKX6-2Q9C056 277 aaPredicted RBP17.57■□□□□ 0.4
U2AF1-206ENST00000464750 IGHV3-73A0A0B4J1V6 119 aa17.56■□□□□ 0.4
U2AF1-206ENST00000464750 PGPEP1LA6NFU8 196 aa17.56■□□□□ 0.4
U2AF1-206ENST00000464750 CIDEAO60543 219 aa17.56■□□□□ 0.4
U2AF1-206ENST00000464750 DNAH10OSP0CZ25 163 aa17.56■□□□□ 0.4
U2AF1-206ENST00000464750 EVI2AP22794 236 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms