RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 DEFB130AP0DP74 79 aa12.1□□□□□ -0.47
VPS52-215ENST00000464425 Q6ZQT7 251 aa12.1□□□□□ -0.47
VPS52-215ENST00000464425 ZNF493Q6ZR52 646 aa12.1□□□□□ -0.47
VPS52-215ENST00000464425 DERL1Q9BUN8 251 aa12.1□□□□□ -0.47
VPS52-215ENST00000464425 MLST8Q9BVC4 326 aa12.1□□□□□ -0.47
VPS52-215ENST00000464425 NOP10Q9NPE3 64 aaKnown RBP12.1□□□□□ -0.47
VPS52-215ENST00000464425 IGHV4-4A0A075B6R2 117 aa12.09□□□□□ -0.47
VPS52-215ENST00000464425 RGS13O14921 159 aa12.09□□□□□ -0.47
VPS52-215ENST00000464425 GCGP01275 180 aa12.09□□□□□ -0.47
VPS52-215ENST00000464425 PFN1P07737 140 aaKnown RBP12.09□□□□□ -0.47
VPS52-215ENST00000464425 BAGE2Q86Y30 109 aa12.09□□□□□ -0.47
VPS52-215ENST00000464425 APLNQ9ULZ1 77 aa12.09□□□□□ -0.47
VPS52-215ENST00000464425 TIMM8BQ9Y5J9 83 aaPredicted RBP12.09□□□□□ -0.47
VPS52-215ENST00000464425 HYDINQ4G0P3 5121 aa12.09□□□□□ -0.47
VPS52-215ENST00000464425 ZNF80P51504 273 aaPredicted RBP12.08□□□□□ -0.48
VPS52-215ENST00000464425 PEA15Q15121 130 aa12.08□□□□□ -0.48
VPS52-215ENST00000464425 ANXA2RQ3ZCQ2 193 aa12.08□□□□□ -0.48
VPS52-215ENST00000464425 SMIM12Q96EX1 92 aa12.08□□□□□ -0.48
VPS52-215ENST00000464425 IGHV1OR15-1A0A075B7D0 117 aa12.07□□□□□ -0.48
VPS52-215ENST00000464425 CBY3A6NI87 242 aa12.07□□□□□ -0.48
VPS52-215ENST00000464425 FABP5P3A8MUU1 101 aa12.07□□□□□ -0.48
VPS52-215ENST00000464425 TCTAP57738 103 aa12.07□□□□□ -0.48
VPS52-215ENST00000464425 TDRG1Q3Y452 100 aa12.07□□□□□ -0.48
VPS52-215ENST00000464425 EIF4E3Q8N5X7 224 aaKnown RBP12.07□□□□□ -0.48
VPS52-215ENST00000464425 ZC2HC1AQ96GY0 325 aa12.07□□□□□ -0.48
VPS52-215ENST00000464425 RAB19A4D1S5 217 aa12.06□□□□□ -0.48
VPS52-215ENST00000464425 SRP19P09132 144 aaKnown RBP12.06□□□□□ -0.48
VPS52-215ENST00000464425 GNG4P50150 75 aa12.06□□□□□ -0.48
VPS52-215ENST00000464425 ZNF674Q2M3X9 581 aa12.06□□□□□ -0.48
VPS52-215ENST00000464425 CENPWQ5EE01 88 aa12.06□□□□□ -0.48
VPS52-215ENST00000464425 FAM159AQ6UWV7 190 aa12.06□□□□□ -0.48
VPS52-215ENST00000464425 PARLQ9H300 379 aa12.06□□□□□ -0.48
VPS52-215ENST00000464425 SNURFLB1AK76 121 aa12.05□□□□□ -0.48
VPS52-215ENST00000464425 C9JCJ5 164 aa12.05□□□□□ -0.48
VPS52-215ENST00000464425 CRIP1P50238 77 aa12.05□□□□□ -0.48
VPS52-215ENST00000464425 FAM162BQ5T6X4 162 aa12.05□□□□□ -0.48
VPS52-215ENST00000464425 LGALS9CQ6DKI2 356 aa12.05□□□□□ -0.48
VPS52-215ENST00000464425 KCNS1Q96KK3 526 aa12.05□□□□□ -0.48
VPS52-215ENST00000464425 GSN-AS1Q9NRJ2 163 aa12.05□□□□□ -0.48
VPS52-215ENST00000464425 TP53TG3Q9ULZ0 132 aa12.05□□□□□ -0.48
VPS52-215ENST00000464425 TRBV20OR9-2A0A075B6H5 130 aa12.04□□□□□ -0.48
VPS52-215ENST00000464425 IGLV2-8P01709 118 aa12.04□□□□□ -0.48
VPS52-215ENST00000464425 SRSF3P84103 164 aaKnown RBP12.04□□□□□ -0.48
VPS52-215ENST00000464425 MUC21Q5SSG8 566 aa12.04□□□□□ -0.48
VPS52-215ENST00000464425 NHLRC2Q8NBF2 726 aa12.04□□□□□ -0.48
VPS52-215ENST00000464425 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
VPS52-215ENST00000464425 GAGE12BA1L429 117 aa12.03□□□□□ -0.48
VPS52-215ENST00000464425 GAGE7O76087 117 aa12.03□□□□□ -0.48
VPS52-215ENST00000464425 GAGE12FP0CL80 117 aa12.03□□□□□ -0.48
VPS52-215ENST00000464425 GAGE12GP0CL81 117 aa12.03□□□□□ -0.48
VPS52-215ENST00000464425 GAGE12IP0CL82 117 aa12.03□□□□□ -0.48
VPS52-215ENST00000464425 IBA57Q5T440 356 aaKnown RBP12.03□□□□□ -0.48
VPS52-215ENST00000464425 C11orf72Q8NBR9 251 aa12.03□□□□□ -0.48
VPS52-215ENST00000464425 BIN3Q9NQY0 253 aa12.03□□□□□ -0.48
VPS52-215ENST00000464425 C11orf21Q9P2W6 132 aa12.03□□□□□ -0.48
VPS52-215ENST00000464425 VPS13DQ5THJ4 4388 aa12.02□□□□□ -0.49
VPS52-215ENST00000464425 C9JQL5 133 aa12.02□□□□□ -0.49
VPS52-215ENST00000464425 F5H768 121 aa12.02□□□□□ -0.49
VPS52-215ENST00000464425 SH2D1AO60880 128 aa12.02□□□□□ -0.49
VPS52-215ENST00000464425 FAM74A3Q4VXF1 159 aa12.02□□□□□ -0.49
VPS52-215ENST00000464425 TMEM88Q6PEY1 159 aa12.02□□□□□ -0.49
VPS52-215ENST00000464425 SDF2L1Q9HCN8 221 aa12.02□□□□□ -0.49
VPS52-215ENST00000464425 NAGKQ9UJ70 344 aa12.02□□□□□ -0.49
VPS52-215ENST00000464425 LY96Q9Y6Y9 160 aa12.02□□□□□ -0.49
VPS52-215ENST00000464425 TRGV11A0A075B6L2 103 aa12.01□□□□□ -0.49
VPS52-215ENST00000464425 ATP5G1P05496 136 aa12.01□□□□□ -0.49
VPS52-215ENST00000464425 CEBPGP53567 150 aa12.01□□□□□ -0.49
VPS52-215ENST00000464425 DAZ2Q13117 558 aaKnown RBP12.01□□□□□ -0.49
VPS52-215ENST00000464425 Q6ZTI0 123 aa12.01□□□□□ -0.49
VPS52-215ENST00000464425 FAM210BQ96KR6 192 aa12.01□□□□□ -0.49
VPS52-215ENST00000464425 SMIM7Q9BQ49 75 aa12.01□□□□□ -0.49
VPS52-215ENST00000464425 IGKV3D-20A0A0C4DH25 116 aa12□□□□□ -0.49
VPS52-215ENST00000464425 ZNF727A8MUV8 499 aa12□□□□□ -0.49
VPS52-215ENST00000464425 GNRH2O43555 120 aa12□□□□□ -0.49
VPS52-215ENST00000464425 LINC00612Q8N6U2 182 aa12□□□□□ -0.49
VPS52-215ENST00000464425 OCC1Q8TAD7 63 aa12□□□□□ -0.49
VPS52-215ENST00000464425 TRGV1A0A0A0MS02 117 aa11.99□□□□□ -0.49
VPS52-215ENST00000464425 PGPEP1LA6NFU8 196 aa11.99□□□□□ -0.49
VPS52-215ENST00000464425 KRBOX1C9JBD0 128 aa11.99□□□□□ -0.49
VPS52-215ENST00000464425 ORM1P02763 201 aa11.99□□□□□ -0.49
VPS52-215ENST00000464425 TYMSP04818 313 aa11.99□□□□□ -0.49
VPS52-215ENST00000464425 MGST1P10620 155 aaKnown RBP11.99□□□□□ -0.49
VPS52-215ENST00000464425 TCL1AP56279 114 aa11.99□□□□□ -0.49
VPS52-215ENST00000464425 LINC01559Q495D7 138 aa11.99□□□□□ -0.49
VPS52-215ENST00000464425 MDFICQ9P1T7 246 aa11.99□□□□□ -0.49
VPS52-215ENST00000464425 IGHV3-16A0A0C4DH30 117 aa11.98□□□□□ -0.49
VPS52-215ENST00000464425 C19orf71A6NCJ1 209 aa11.98□□□□□ -0.49
VPS52-215ENST00000464425 B4DEV8 164 aa11.98□□□□□ -0.49
VPS52-215ENST00000464425 ZNF415Q09FC8 603 aa11.98□□□□□ -0.49
VPS52-215ENST00000464425 OR5I1Q13606 314 aa11.98□□□□□ -0.49
VPS52-215ENST00000464425 SOHLH1Q5JUK2 328 aa11.98□□□□□ -0.49
VPS52-215ENST00000464425 DNLZQ5SXM8 178 aa11.98□□□□□ -0.49
VPS52-215ENST00000464425 PRR27Q6MZM9 219 aa11.98□□□□□ -0.49
VPS52-215ENST00000464425 UQCC3Q6UW78 93 aa11.98□□□□□ -0.49
VPS52-215ENST00000464425 KMT2AQ03164 3969 aa11.97□□□□□ -0.49
VPS52-215ENST00000464425 TRGV2A0A075B6R0 118 aa11.97□□□□□ -0.49
VPS52-215ENST00000464425 LINC00862A6NCI5 91 aa11.97□□□□□ -0.49
VPS52-215ENST00000464425 K7EN84 100 aa11.97□□□□□ -0.49
VPS52-215ENST00000464425 TMEM241Q24JQ0 296 aa11.97□□□□□ -0.49
VPS52-215ENST00000464425 ZNF575Q86XF7 245 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms