RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 ROS1P08922 2347 aa12.4□□□□□ -0.42
SMC4-204ENST00000462787 IGHV1OR15-1A0A075B7D0 117 aa12.4□□□□□ -0.42
SMC4-204ENST00000462787 PRSS47A8MTI9 375 aa12.4□□□□□ -0.42
SMC4-204ENST00000462787 C6orf226Q5I0X4 101 aa12.4□□□□□ -0.42
SMC4-204ENST00000462787 NOTCH4Q99466 2003 aa12.4□□□□□ -0.42
SMC4-204ENST00000462787 TRAV13-2A0A0B4J235 113 aa12.39□□□□□ -0.43
SMC4-204ENST00000462787 A4D1N5 150 aa12.39□□□□□ -0.43
SMC4-204ENST00000462787 NDUFA4O00483 81 aa12.39□□□□□ -0.43
SMC4-204ENST00000462787 OVOL3O00110 214 aa12.39□□□□□ -0.43
SMC4-204ENST00000462787 PLA2G5P39877 138 aa12.39□□□□□ -0.43
SMC4-204ENST00000462787 Q6ZS92 163 aa12.39□□□□□ -0.43
SMC4-204ENST00000462787 UBL5Q9BZL1 73 aa12.39□□□□□ -0.43
SMC4-204ENST00000462787 Q6ZUT4 128 aa12.39□□□□□ -0.43
SMC4-204ENST00000462787 TNRC6AQ8NDV7 1962 aaKnown RBP12.39□□□□□ -0.43
SMC4-204ENST00000462787 TM2D2Q9BX73 214 aa12.38□□□□□ -0.43
SMC4-204ENST00000462787 TRGV1A0A0A0MS02 117 aa12.38□□□□□ -0.43
SMC4-204ENST00000462787 K7EIM0 57 aa12.38□□□□□ -0.43
SMC4-204ENST00000462787 SAA4P35542 130 aa12.38□□□□□ -0.43
SMC4-204ENST00000462787 UBE2E1P51965 193 aa12.38□□□□□ -0.43
SMC4-204ENST00000462787 COLQQ9Y215 455 aaPredicted RBP12.38□□□□□ -0.43
SMC4-204ENST00000462787 INSP01308 110 aa12.37□□□□□ -0.43
SMC4-204ENST00000462787 BRWD1-AS2P59051 145 aa12.37□□□□□ -0.43
SMC4-204ENST00000462787 FOXE3Q13461 319 aa12.37□□□□□ -0.43
SMC4-204ENST00000462787 KLHL30-AS1Q8NEE0 82 aa12.37□□□□□ -0.43
SMC4-204ENST00000462787 RNF183Q96D59 192 aa12.37□□□□□ -0.43
SMC4-204ENST00000462787 MLST8Q9BVC4 326 aa12.37□□□□□ -0.43
SMC4-204ENST00000462787 TOMM6Q96B49 74 aa12.37□□□□□ -0.43
SMC4-204ENST00000462787 MUSTN1Q8IVN3 82 aa12.36□□□□□ -0.43
SMC4-204ENST00000462787 RNF114Q9Y508 228 aa12.36□□□□□ -0.43
SMC4-204ENST00000462787 TRBV10-2A0A0K0K1G8 114 aa12.36□□□□□ -0.43
SMC4-204ENST00000462787 J3KT08 172 aa12.36□□□□□ -0.43
SMC4-204ENST00000462787 TICRRQ7Z2Z1 1910 aa12.36□□□□□ -0.43
SMC4-204ENST00000462787 LOXL1Q08397 574 aaPredicted RBP12.36□□□□□ -0.43
SMC4-204ENST00000462787 TP73-AS1Q9UF72 201 aa12.36□□□□□ -0.43
SMC4-204ENST00000462787 H3BUX3 64 aa12.35□□□□□ -0.43
SMC4-204ENST00000462787 BAALC-AS2P0C853 105 aa12.35□□□□□ -0.43
SMC4-204ENST00000462787 CMC4P56277 68 aaPredicted RBP12.35□□□□□ -0.43
SMC4-204ENST00000462787 ICOSQ9Y6W8 199 aa12.35□□□□□ -0.43
SMC4-204ENST00000462787 G3V318 75 aa12.35□□□□□ -0.43
SMC4-204ENST00000462787 H3BT86 120 aa12.35□□□□□ -0.43
SMC4-204ENST00000462787 HERVK_113P63121 156 aa12.35□□□□□ -0.43
SMC4-204ENST00000462787 CRYGCP07315 174 aa12.35□□□□□ -0.43
SMC4-204ENST00000462787 EML6Q6ZMW3 1958 aa12.35□□□□□ -0.43
SMC4-204ENST00000462787 ATOX1O00244 68 aa12.35□□□□□ -0.43
SMC4-204ENST00000462787 ABCA1O95477 2261 aa12.34□□□□□ -0.43
SMC4-204ENST00000462787 EIF4EBP1Q13541 118 aaPredicted RBP12.34□□□□□ -0.43
SMC4-204ENST00000462787 LINC00322Q6ZN03 302 aaPredicted RBP12.34□□□□□ -0.43
SMC4-204ENST00000462787 ARHGAP21Q5T5U3 1957 aa12.34□□□□□ -0.43
SMC4-204ENST00000462787 NUP210Q8TEM1 1887 aaPredicted RBP12.34□□□□□ -0.43
SMC4-204ENST00000462787 BAALCQ8WXS3 180 aa12.34□□□□□ -0.43
SMC4-204ENST00000462787 RPL39LQ96EH5 51 aaKnown RBP12.34□□□□□ -0.43
SMC4-204ENST00000462787 WI2-2373I1.2A0A1W2PRP0 233 aa12.34□□□□□ -0.43
SMC4-204ENST00000462787 SYNJ2BPP57105 145 aa12.34□□□□□ -0.43
SMC4-204ENST00000462787 MRPL36Q9P0J6 103 aaKnown RBP12.34□□□□□ -0.43
SMC4-204ENST00000462787 A0A0B4J2C4 111 aa12.33□□□□□ -0.43
SMC4-204ENST00000462787 FAM236AA0A1B0GUQ0 79 aa12.33□□□□□ -0.43
SMC4-204ENST00000462787 FAM236BA0A1B0GV22 79 aa12.33□□□□□ -0.43
SMC4-204ENST00000462787 SPINK13Q1W4C9 94 aa12.33□□□□□ -0.43
SMC4-204ENST00000462787 ZFP2Q6ZN57 461 aa12.33□□□□□ -0.43
SMC4-204ENST00000462787 COX6B1P14854 86 aa12.33□□□□□ -0.44
SMC4-204ENST00000462787 IGLV2-23P01705 113 aa12.33□□□□□ -0.44
SMC4-204ENST00000462787 PTH2Q96A98 100 aa12.33□□□□□ -0.44
SMC4-204ENST00000462787 KLK9Q9UKQ9 250 aa12.33□□□□□ -0.44
SMC4-204ENST00000462787 SPTBN1Q01082 2364 aaKnown RBP12.33□□□□□ -0.44
SMC4-204ENST00000462787 IGKV1D-37A0A075B6S9 117 aa12.33□□□□□ -0.44
SMC4-204ENST00000462787 MT-ATP8P03928 68 aa12.33□□□□□ -0.44
SMC4-204ENST00000462787 KNCNA6PVL3 124 aa12.32□□□□□ -0.44
SMC4-204ENST00000462787 NDUFA11Q86Y39 141 aa12.32□□□□□ -0.44
SMC4-204ENST00000462787 GVINP1Q7Z2Y8 2422 aa12.32□□□□□ -0.44
SMC4-204ENST00000462787 IGFBPL1Q8WX77 278 aa12.32□□□□□ -0.44
SMC4-204ENST00000462787 MSRB2Q9Y3D2 182 aa12.32□□□□□ -0.44
SMC4-204ENST00000462787 GNRH2O43555 120 aa12.32□□□□□ -0.44
SMC4-204ENST00000462787 RBMY1FQ15415 496 aaKnown RBP12.32□□□□□ -0.44
SMC4-204ENST00000462787 USF3Q68DE3 2245 aa12.31□□□□□ -0.44
SMC4-204ENST00000462787 IGLV11-55A0A075B6I3 123 aa12.31□□□□□ -0.44
SMC4-204ENST00000462787 C11orf86A6NJI1 115 aa12.31□□□□□ -0.44
SMC4-204ENST00000462787 PIP4P2Q8N4L2 257 aa12.31□□□□□ -0.44
SMC4-204ENST00000462787 TIMM17AQ99595 171 aa12.31□□□□□ -0.44
SMC4-204ENST00000462787 CTSZQ9UBR2 303 aa12.31□□□□□ -0.44
SMC4-204ENST00000462787 DOCK10Q96BY6 2186 aa12.31□□□□□ -0.44
SMC4-204ENST00000462787 NCOA6Q14686 2063 aaPredicted RBP12.31□□□□□ -0.44
SMC4-204ENST00000462787 LINC00310P59036 64 aa12.31□□□□□ -0.44
SMC4-204ENST00000462787 RPL32P62910 135 aaKnown RBP12.31□□□□□ -0.44
SMC4-204ENST00000462787 PROP1O75360 226 aa12.31□□□□□ -0.44
SMC4-204ENST00000462787 C2orf91Q6ZV80 131 aa12.31□□□□□ -0.44
SMC4-204ENST00000462787 PKDREJQ9NTG1 2253 aa12.31□□□□□ -0.44
SMC4-204ENST00000462787 IGHV3-53P01767 116 aa12.31□□□□□ -0.44
SMC4-204ENST00000462787 NDUFV3P56181 108 aaKnown RBP12.31□□□□□ -0.44
SMC4-204ENST00000462787 Q71RC1 249 aaPredicted RBP12.3□□□□□ -0.44
SMC4-204ENST00000462787 SPRNQ5BIV9 151 aa12.3□□□□□ -0.44
SMC4-204ENST00000462787 Q8N976 141 aa12.3□□□□□ -0.44
SMC4-204ENST00000462787 SS18Q15532 418 aa12.3□□□□□ -0.44
SMC4-204ENST00000462787 BRD3OSQ6XYD6 125 aa12.3□□□□□ -0.44
SMC4-204ENST00000462787 NPBQ8NG41 125 aa12.3□□□□□ -0.44
SMC4-204ENST00000462787 E7EUB6 86 aa12.3□□□□□ -0.44
SMC4-204ENST00000462787 LY6HO94772 140 aa12.3□□□□□ -0.44
SMC4-204ENST00000462787 TCL1BO95988 128 aa12.29□□□□□ -0.44
SMC4-204ENST00000462787 RITA1Q96K30 269 aa12.29□□□□□ -0.44
SMC4-204ENST00000462787 TEX22C9J3V5 150 aa12.29□□□□□ -0.44
SMC4-204ENST00000462787 ATP5G1P05496 136 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms