RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 HBBP68871 147 aa10.99□□□□□ -0.65
HDAC6-213ENST00000462730 ZNF418Q8TF45 676 aaPredicted RBP10.99□□□□□ -0.65
HDAC6-213ENST00000462730 UBE2E2Q96LR5 201 aa10.99□□□□□ -0.65
HDAC6-213ENST00000462730 SELENOKQ9Y6D0 94 aa10.99□□□□□ -0.65
HDAC6-213ENST00000462730 IGHV4OR15-8A0A075B7B6 117 aa10.98□□□□□ -0.65
HDAC6-213ENST00000462730 A0A087WW49 117 aa10.98□□□□□ -0.65
HDAC6-213ENST00000462730 SOCS3O14543 225 aa10.98□□□□□ -0.65
HDAC6-213ENST00000462730 HILS1P60008 231 aa10.98□□□□□ -0.65
HDAC6-213ENST00000462730 AGPAT4-IT1Q9H0P7 198 aa10.98□□□□□ -0.65
HDAC6-213ENST00000462730 IGKV3-7A0A075B6H7 116 aa10.97□□□□□ -0.65
HDAC6-213ENST00000462730 TMEM189A5PLL7 270 aa10.97□□□□□ -0.65
HDAC6-213ENST00000462730 ZNF80P51504 273 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-213ENST00000462730 TMEM78Q5T7P6 136 aa10.97□□□□□ -0.65
HDAC6-213ENST00000462730 URB1-AS1Q96HZ7 61 aa10.97□□□□□ -0.65
HDAC6-213ENST00000462730 CSTL1Q9H114 145 aa10.97□□□□□ -0.65
HDAC6-213ENST00000462730 TMSB15BA0A087X1C1 80 aa10.97□□□□□ -0.65
HDAC6-213ENST00000462730 CCL25O15444 150 aa10.97□□□□□ -0.65
HDAC6-213ENST00000462730 TMEM213A2RRL7 107 aa10.96□□□□□ -0.65
HDAC6-213ENST00000462730 IGLL1P15814 213 aa10.96□□□□□ -0.65
HDAC6-213ENST00000462730 ZNF138P52744 262 aa10.96□□□□□ -0.65
HDAC6-213ENST00000462730 PRR31Q5SQ13 230 aa10.96□□□□□ -0.65
HDAC6-213ENST00000462730 SPATA12Q7Z6I5 190 aa10.96□□□□□ -0.65
HDAC6-213ENST00000462730 TMEM70Q9BUB7 260 aa10.96□□□□□ -0.65
HDAC6-213ENST00000462730 INAFM1C9JVW0 142 aa10.96□□□□□ -0.66
HDAC6-213ENST00000462730 CRXO43186 299 aaPredicted RBP10.96□□□□□ -0.66
HDAC6-213ENST00000462730 HINT1P49773 126 aaPredicted RBP10.96□□□□□ -0.66
HDAC6-213ENST00000462730 FOXA3P55318 350 aaPredicted RBP10.96□□□□□ -0.66
HDAC6-213ENST00000462730 SYNJ2BPP57105 145 aa10.96□□□□□ -0.66
HDAC6-213ENST00000462730 C9orf47Q6ZRZ4 202 aa10.96□□□□□ -0.66
HDAC6-213ENST00000462730 C18orf65Q6ZTR6 163 aa10.96□□□□□ -0.66
HDAC6-213ENST00000462730 CHCHD1Q96BP2 118 aaKnown RBP10.96□□□□□ -0.66
HDAC6-213ENST00000462730 HOXD3P31249 432 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-213ENST00000462730 TCTEX1D4Q5JR98 221 aa10.95□□□□□ -0.66
HDAC6-213ENST00000462730 CFAP161Q6P656 301 aa10.95□□□□□ -0.66
HDAC6-213ENST00000462730 OR4C5Q8NGB2 326 aa10.95□□□□□ -0.66
HDAC6-213ENST00000462730 TPPP3Q9BW30 176 aa10.95□□□□□ -0.66
HDAC6-213ENST00000462730 OR5AL1P0C617 328 aa10.94□□□□□ -0.66
HDAC6-213ENST00000462730 KHDC1LQ5JSQ8 128 aa10.94□□□□□ -0.66
HDAC6-213ENST00000462730 C12orf54Q6X4T0 127 aa10.94□□□□□ -0.66
HDAC6-213ENST00000462730 IGHV1-24A0A0C4DH33 117 aa10.94□□□□□ -0.66
HDAC6-213ENST00000462730 A0A1B0GUT8 65 aa10.94□□□□□ -0.66
HDAC6-213ENST00000462730 M0QZ24 198 aa10.94□□□□□ -0.66
HDAC6-213ENST00000462730 HAX1O00165 279 aa10.94□□□□□ -0.66
HDAC6-213ENST00000462730 OVOL1O14753 267 aa10.94□□□□□ -0.66
HDAC6-213ENST00000462730 ARMS2P0C7Q2 107 aa10.94□□□□□ -0.66
HDAC6-213ENST00000462730 Q6AWC8 147 aa10.94□□□□□ -0.66
HDAC6-213ENST00000462730 PMCHL2Q9BQD1 86 aa10.94□□□□□ -0.66
HDAC6-213ENST00000462730 NF1P21359 2839 aa10.93□□□□□ -0.66
HDAC6-213ENST00000462730 FABP5P3A8MUU1 101 aa10.93□□□□□ -0.66
HDAC6-213ENST00000462730 LGALS9O00182 355 aa10.93□□□□□ -0.66
HDAC6-213ENST00000462730 DEFB1P60022 68 aa10.93□□□□□ -0.66
HDAC6-213ENST00000462730 RIGQ13278 110 aa10.93□□□□□ -0.66
HDAC6-213ENST00000462730 DEFB136Q30KP8 78 aa10.93□□□□□ -0.66
HDAC6-213ENST00000462730 OR10J6PQ8NGY7 276 aa10.93□□□□□ -0.66
HDAC6-213ENST00000462730 MS4A6AQ9H2W1 248 aa10.93□□□□□ -0.66
HDAC6-213ENST00000462730 OR4C46A6NHA9 309 aa10.92□□□□□ -0.66
HDAC6-213ENST00000462730 ORM1P02763 201 aa10.92□□□□□ -0.66
HDAC6-213ENST00000462730 SRSF2Q01130 221 aaKnown RBP10.92□□□□□ -0.66
HDAC6-213ENST00000462730 HIST2H2BDQ6DRA6 164 aa10.92□□□□□ -0.66
HDAC6-213ENST00000462730 HIVEP1P15822 2718 aa10.92□□□□□ -0.66
HDAC6-213ENST00000462730 FLNBO75369 2602 aaKnown RBP10.92□□□□□ -0.66
HDAC6-213ENST00000462730 LOC102724200A0A096LPH7 203 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-213ENST00000462730 SYS1-DBNDD2H3BUS1 97 aa10.92□□□□□ -0.66
HDAC6-213ENST00000462730 LYZL1Q6UWQ5 148 aa10.92□□□□□ -0.66
HDAC6-213ENST00000462730 WFDC3Q8IUB2 231 aa10.92□□□□□ -0.66
HDAC6-213ENST00000462730 LINC01006Q8NI28 216 aa10.92□□□□□ -0.66
HDAC6-213ENST00000462730 C4orf3Q8WVX3 66 aa10.92□□□□□ -0.66
HDAC6-213ENST00000462730 JMJD8Q96S16 334 aa10.92□□□□□ -0.66
HDAC6-213ENST00000462730 TMEM191AQ9H0A3 160 aa10.92□□□□□ -0.66
HDAC6-213ENST00000462730 NSD1Q96L73 2696 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-213ENST00000462730 LEPROTL1O95214 131 aa10.91□□□□□ -0.66
HDAC6-213ENST00000462730 ID1P41134 155 aa10.91□□□□□ -0.66
HDAC6-213ENST00000462730 SLURP1P55000 103 aa10.91□□□□□ -0.66
HDAC6-213ENST00000462730 HIST1H1AQ02539 215 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-213ENST00000462730 Q6ZVH6 145 aa10.91□□□□□ -0.66
HDAC6-213ENST00000462730 LINC00477Q96M19 166 aa10.91□□□□□ -0.66
HDAC6-213ENST00000462730 C16orf95Q9H693 158 aa10.91□□□□□ -0.66
HDAC6-213ENST00000462730 LINC01619G3V211 115 aa10.9□□□□□ -0.66
HDAC6-213ENST00000462730 LINC01559Q495D7 138 aa10.9□□□□□ -0.66
HDAC6-213ENST00000462730 SAMD13Q5VXD3 122 aa10.9□□□□□ -0.66
HDAC6-213ENST00000462730 LINC00173Q6ZV60 143 aa10.9□□□□□ -0.66
HDAC6-213ENST00000462730 KLHL30-AS1Q8NEE0 82 aa10.9□□□□□ -0.66
HDAC6-213ENST00000462730 DCANP1Q8TF63 244 aa10.9□□□□□ -0.66
HDAC6-213ENST00000462730 A0A1B0GW15 77 aa10.9□□□□□ -0.66
HDAC6-213ENST00000462730 F6UB75 175 aa10.9□□□□□ -0.66
HDAC6-213ENST00000462730 C11orf44Q8N8P7 122 aa10.9□□□□□ -0.66
HDAC6-213ENST00000462730 FER1L6-AS1Q8NA97 138 aa10.9□□□□□ -0.66
HDAC6-213ENST00000462730 OR8A1Q8NGG7 326 aa10.9□□□□□ -0.66
HDAC6-213ENST00000462730 LENEPQ9Y5L5 61 aa10.9□□□□□ -0.66
HDAC6-213ENST00000462730 CBY3A6NI87 242 aa10.89□□□□□ -0.67
HDAC6-213ENST00000462730 VAMP3Q15836 100 aa10.89□□□□□ -0.67
HDAC6-213ENST00000462730 PRR9Q5T870 116 aa10.89□□□□□ -0.67
HDAC6-213ENST00000462730 OR11H1Q8NG94 326 aa10.89□□□□□ -0.67
HDAC6-213ENST00000462730 DPF1Q92782 380 aa10.89□□□□□ -0.67
HDAC6-213ENST00000462730 VPS25Q9BRG1 176 aa10.89□□□□□ -0.67
HDAC6-213ENST00000462730 IGLC6P0CF74 106 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 SLC25A34Q6PIV7 304 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 DEFB125Q8N687 156 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 OR1N2Q8NGR9 330 aa10.88□□□□□ -0.67
HDAC6-213ENST00000462730 DUX3Q96PT4 197 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms