RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 PPT1P50897 306 aa11.12□□□□□ -0.63
ERCC3-206ENST00000462306 LGALS9BQ3B8N2 356 aa11.12□□□□□ -0.63
ERCC3-206ENST00000462306 ZFP69Q49AA0 526 aa11.12□□□□□ -0.63
ERCC3-206ENST00000462306 SMUG1Q53HV7 270 aa11.12□□□□□ -0.63
ERCC3-206ENST00000462306 Q86TA4 180 aa11.12□□□□□ -0.63
ERCC3-206ENST00000462306 TCEAL7Q9BRU2 100 aa11.12□□□□□ -0.63
ERCC3-206ENST00000462306 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
ERCC3-206ENST00000462306 NAGKQ9UJ70 344 aa11.12□□□□□ -0.63
ERCC3-206ENST00000462306 KMT2AQ03164 3969 aa11.11□□□□□ -0.63
ERCC3-206ENST00000462306 TRAV1-1A0A0B4J248 108 aa11.11□□□□□ -0.63
ERCC3-206ENST00000462306 PFN1P07737 140 aaKnown RBP11.11□□□□□ -0.63
ERCC3-206ENST00000462306 HOXA5P20719 270 aa11.11□□□□□ -0.63
ERCC3-206ENST00000462306 CCL20P78556 96 aa11.11□□□□□ -0.63
ERCC3-206ENST00000462306 C15orf53Q8NAA6 179 aa11.11□□□□□ -0.63
ERCC3-206ENST00000462306 MRPL16Q9NX20 251 aaKnown RBP11.11□□□□□ -0.63
ERCC3-206ENST00000462306 TRGV2A0A075B6R0 118 aa11.1□□□□□ -0.63
ERCC3-206ENST00000462306 IGHV3-16A0A0C4DH30 117 aa11.1□□□□□ -0.63
ERCC3-206ENST00000462306 TYMSP04818 313 aa11.1□□□□□ -0.63
ERCC3-206ENST00000462306 P0DMU3 169 aa11.1□□□□□ -0.63
ERCC3-206ENST00000462306 FAM231AP0DMU4 169 aa11.1□□□□□ -0.63
ERCC3-206ENST00000462306 FAM231CP0DMU5 169 aa11.1□□□□□ -0.63
ERCC3-206ENST00000462306 KCNS1Q96KK3 526 aa11.1□□□□□ -0.63
ERCC3-206ENST00000462306 TRBV6-1A0A0K0K1D8 114 aa11.09□□□□□ -0.63
ERCC3-206ENST00000462306 OR5I1Q13606 314 aa11.09□□□□□ -0.63
ERCC3-206ENST00000462306 COX8CQ7Z4L0 72 aa11.09□□□□□ -0.63
ERCC3-206ENST00000462306 FMC1Q96HJ9 113 aa11.09□□□□□ -0.63
ERCC3-206ENST00000462306 SPXQ9BT56 116 aa11.09□□□□□ -0.63
ERCC3-206ENST00000462306 SDF2L1Q9HCN8 221 aa11.09□□□□□ -0.63
ERCC3-206ENST00000462306 POM121L12Q8N7R1 296 aa11.08□□□□□ -0.64
ERCC3-206ENST00000462306 RASL10AQ92737 203 aa11.08□□□□□ -0.64
ERCC3-206ENST00000462306 ZFP30Q9Y2G7 519 aa11.08□□□□□ -0.64
ERCC3-206ENST00000462306 TRAV26-1A0A087WT03 109 aa11.07□□□□□ -0.64
ERCC3-206ENST00000462306 SCO2A0A1W2PP80 73 aa11.07□□□□□ -0.64
ERCC3-206ENST00000462306 LTAP01374 205 aa11.07□□□□□ -0.64
ERCC3-206ENST00000462306 AKR1C3P42330 323 aa11.07□□□□□ -0.64
ERCC3-206ENST00000462306 UBE2G1P62253 170 aa11.07□□□□□ -0.64
ERCC3-206ENST00000462306 DNAH6Q9C0G6 4158 aa11.06□□□□□ -0.64
ERCC3-206ENST00000462306 MUC4Q99102 2169 aa11.06□□□□□ -0.64
ERCC3-206ENST00000462306 A0A0J9YY99 117 aa11.06□□□□□ -0.64
ERCC3-206ENST00000462306 FABP5P3A8MUU1 101 aa11.06□□□□□ -0.64
ERCC3-206ENST00000462306 NUDT3O95989 172 aa11.06□□□□□ -0.64
ERCC3-206ENST00000462306 CRIP1P50238 77 aa11.06□□□□□ -0.64
ERCC3-206ENST00000462306 NKX2-5P52952 324 aaPredicted RBP11.06□□□□□ -0.64
ERCC3-206ENST00000462306 RNF212Q495C1 297 aa11.06□□□□□ -0.64
ERCC3-206ENST00000462306 ZC2HC1AQ96GY0 325 aa11.06□□□□□ -0.64
ERCC3-206ENST00000462306 MANBALQ9NQG1 85 aa11.06□□□□□ -0.64
ERCC3-206ENST00000462306 GNG13Q9P2W3 67 aa11.06□□□□□ -0.64
ERCC3-206ENST00000462306 IGKV3D-20A0A0C4DH25 116 aa11.05□□□□□ -0.64
ERCC3-206ENST00000462306 H3BNG1 76 aa11.05□□□□□ -0.64
ERCC3-206ENST00000462306 M0R2P5 195 aa11.05□□□□□ -0.64
ERCC3-206ENST00000462306 VSIG2Q96IQ7 327 aa11.05□□□□□ -0.64
ERCC3-206ENST00000462306 TEX46H3BTG2 121 aa11.04□□□□□ -0.64
ERCC3-206ENST00000462306 IGHV3-53P01767 116 aa11.04□□□□□ -0.64
ERCC3-206ENST00000462306 S100A9P06702 114 aaKnown RBP11.04□□□□□ -0.64
ERCC3-206ENST00000462306 FHL2Q14192 279 aa11.04□□□□□ -0.64
ERCC3-206ENST00000462306 C9orf85Q96MD7 179 aa11.04□□□□□ -0.64
ERCC3-206ENST00000462306 BOLA1Q9Y3E2 137 aa11.04□□□□□ -0.64
ERCC3-206ENST00000462306 RNASE3P12724 160 aaKnown RBP11.03□□□□□ -0.64
ERCC3-206ENST00000462306 ZNF674Q2M3X9 581 aa11.03□□□□□ -0.64
ERCC3-206ENST00000462306 ALKAL2Q6UX46 152 aa11.03□□□□□ -0.64
ERCC3-206ENST00000462306 UBE2DNLQ8IWF7 75 aa11.03□□□□□ -0.64
ERCC3-206ENST00000462306 C11orf52Q96A22 123 aa11.03□□□□□ -0.64
ERCC3-206ENST00000462306 ZNF479Q96JC4 524 aa11.03□□□□□ -0.64
ERCC3-206ENST00000462306 SH2D1AO60880 128 aa11.02□□□□□ -0.65
ERCC3-206ENST00000462306 SFTA3P0C7M3 94 aa11.02□□□□□ -0.65
ERCC3-206ENST00000462306 FAM162BQ5T6X4 162 aa11.02□□□□□ -0.65
ERCC3-206ENST00000462306 ZNF575Q86XF7 245 aa11.02□□□□□ -0.65
ERCC3-206ENST00000462306 TXNDC17Q9BRA2 123 aa11.02□□□□□ -0.65
ERCC3-206ENST00000462306 MLST8Q9BVC4 326 aa11.02□□□□□ -0.65
ERCC3-206ENST00000462306 KRBOX1C9JBD0 128 aa11.01□□□□□ -0.65
ERCC3-206ENST00000462306 ORM1P02763 201 aa11.01□□□□□ -0.65
ERCC3-206ENST00000462306 BAGE2Q86Y30 109 aa11.01□□□□□ -0.65
ERCC3-206ENST00000462306 NHLRC2Q8NBF2 726 aa11.01□□□□□ -0.65
ERCC3-206ENST00000462306 PRO0255Q9UI72 69 aa11.01□□□□□ -0.65
ERCC3-206ENST00000462306 A0A096LPF7 62 aa11□□□□□ -0.65
ERCC3-206ENST00000462306 TRAV4A0A0B4J268 109 aa11□□□□□ -0.65
ERCC3-206ENST00000462306 B4DEV8 164 aa11□□□□□ -0.65
ERCC3-206ENST00000462306 RPL35P42766 123 aaKnown RBP11□□□□□ -0.65
ERCC3-206ENST00000462306 CRYBA4P53673 196 aa11□□□□□ -0.65
ERCC3-206ENST00000462306 FAM3BP58499 235 aaPredicted RBP11□□□□□ -0.65
ERCC3-206ENST00000462306 MEF2BQ02080 365 aaPredicted RBP11□□□□□ -0.65
ERCC3-206ENST00000462306 SLAQ13239 276 aa11□□□□□ -0.65
ERCC3-206ENST00000462306 ZNF876PQ49A33 203 aa11□□□□□ -0.65
ERCC3-206ENST00000462306 PTH2Q96A98 100 aa11□□□□□ -0.65
ERCC3-206ENST00000462306 DERL1Q9BUN8 251 aa11□□□□□ -0.65
ERCC3-206ENST00000462306 HHLA3Q9XRX5 114 aa11□□□□□ -0.65
ERCC3-206ENST00000462306 LINC00588Q9Y4M8 146 aa11□□□□□ -0.65
ERCC3-206ENST00000462306 NACAE9PAV3 2078 aa11□□□□□ -0.65
ERCC3-206ENST00000462306 TRGV4A0A0C4DH28 118 aa10.99□□□□□ -0.65
ERCC3-206ENST00000462306 PGPEP1LA6NFU8 196 aa10.99□□□□□ -0.65
ERCC3-206ENST00000462306 C9JCJ5 164 aa10.99□□□□□ -0.65
ERCC3-206ENST00000462306 M0R036 132 aa10.99□□□□□ -0.65
ERCC3-206ENST00000462306 PAX4O43316 350 aa10.99□□□□□ -0.65
ERCC3-206ENST00000462306 IFNA1P01562 189 aa10.99□□□□□ -0.65
ERCC3-206ENST00000462306 BCL2P10415 239 aa10.99□□□□□ -0.65
ERCC3-206ENST00000462306 ASIPP42127 132 aa10.99□□□□□ -0.65
ERCC3-206ENST00000462306 CCL18P55774 89 aa10.99□□□□□ -0.65
ERCC3-206ENST00000462306 LINC01559Q495D7 138 aa10.99□□□□□ -0.65
ERCC3-206ENST00000462306 DNLZQ5SXM8 178 aa10.99□□□□□ -0.65
ERCC3-206ENST00000462306 OR4C5Q8NGB2 326 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms