RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 GAGE12FP0CL80 117 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 GAGE12GP0CL81 117 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 GAGE12IP0CL82 117 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 PPT1P50897 306 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 RAB5CP51148 216 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 ANXA2RQ3ZCQ2 193 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 GAGE13Q4V321 117 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 Q6AWC8 147 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 FAM159AQ6UWV7 190 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 ZNF680Q8NEM1 530 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 HIST1H2BAQ96A08 127 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 APLNQ9ULZ1 77 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 KLF12Q9Y4X4 402 aa7.15□□□□□ -1.26
RFX3-210ENST00000457373 TRAV21A0A0B4J279 112 aa7.14□□□□□ -1.27
RFX3-210ENST00000457373 FBLL1A6NHQ2 334 aaKnown RBP7.14□□□□□ -1.27
RFX3-210ENST00000457373 TEX46H3BTG2 121 aa7.14□□□□□ -1.27
RFX3-210ENST00000457373 GCGP01275 180 aa7.14□□□□□ -1.27
RFX3-210ENST00000457373 ZNF80P51504 273 aaPredicted RBP7.14□□□□□ -1.27
RFX3-210ENST00000457373 PTTG1IPP53801 180 aa7.14□□□□□ -1.27
RFX3-210ENST00000457373 UBE2G1P62253 170 aa7.14□□□□□ -1.27
RFX3-210ENST00000457373 CCL20P78556 96 aa7.14□□□□□ -1.27
RFX3-210ENST00000457373 SMUG1Q53HV7 270 aa7.14□□□□□ -1.27
RFX3-210ENST00000457373 CFAP161Q6P656 301 aa7.14□□□□□ -1.27
RFX3-210ENST00000457373 C11orf72Q8NBR9 251 aa7.14□□□□□ -1.27
RFX3-210ENST00000457373 ARL2-SNX15V9GYD0 113 aa7.14□□□□□ -1.27
RFX3-210ENST00000457373 F5H768 121 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 GNRH2O43555 120 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 ATP5G1P05496 136 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 AKR1C3P42330 323 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 TCL1AP56279 114 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 TCTAP57738 103 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 ZNF415Q09FC8 603 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 TMEM183BQ1AE95 376 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 SAPCD1Q5SSQ6 148 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 IBA57Q5T440 356 aaKnown RBP7.13□□□□□ -1.27
RFX3-210ENST00000457373 ALKAL2Q6UX46 152 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 Q6ZTI0 123 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 TMEM183AQ8IXX5 376 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 GNG13Q9P2W3 67 aa7.13□□□□□ -1.27
RFX3-210ENST00000457373 TRGV11A0A075B6L2 103 aa7.12□□□□□ -1.27
RFX3-210ENST00000457373 TRGV1A0A0A0MS02 117 aa7.12□□□□□ -1.27
RFX3-210ENST00000457373 DAZ2Q13117 558 aaKnown RBP7.12□□□□□ -1.27
RFX3-210ENST00000457373 Q86TA4 180 aa7.12□□□□□ -1.27
RFX3-210ENST00000457373 LINC00476Q8WZB0 136 aa7.12□□□□□ -1.27
RFX3-210ENST00000457373 NDUFAF3Q9BU61 184 aa7.12□□□□□ -1.27
RFX3-210ENST00000457373 MRPL16Q9NX20 251 aaKnown RBP7.12□□□□□ -1.27
RFX3-210ENST00000457373 FAM30AQ9NZY2 134 aa7.12□□□□□ -1.27
RFX3-210ENST00000457373 MDFICQ9P1T7 246 aa7.12□□□□□ -1.27
RFX3-210ENST00000457373 TRGV2A0A075B6R0 118 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 TRAV1-1A0A0B4J248 108 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 SCO2A0A1W2PP80 73 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 SPINK4O60575 86 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 TYMSP04818 313 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 OR5I1Q13606 314 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 TMEM88Q6PEY1 159 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 LINC00612Q8N6U2 182 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 FMC1Q96HJ9 113 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 KCNS1Q96KK3 526 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 TCEAL7Q9BRU2 100 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 SDF2L1Q9HCN8 221 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 MANBALQ9NQG1 85 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 C11orf21Q9P2W6 132 aa7.11□□□□□ -1.27
RFX3-210ENST00000457373 FABP5P3A8MUU1 101 aa7.1□□□□□ -1.27
RFX3-210ENST00000457373 IFNA1P01562 189 aa7.1□□□□□ -1.27
RFX3-210ENST00000457373 PFN1P07737 140 aaKnown RBP7.1□□□□□ -1.27
RFX3-210ENST00000457373 TDRG1Q3Y452 100 aa7.1□□□□□ -1.27
RFX3-210ENST00000457373 LGALS9CQ6DKI2 356 aa7.1□□□□□ -1.27
RFX3-210ENST00000457373 FAM210BQ96KR6 192 aa7.1□□□□□ -1.27
RFX3-210ENST00000457373 ZFP30Q9Y2G7 519 aa7.1□□□□□ -1.27
RFX3-210ENST00000457373 CSMD3Q7Z407 3707 aa7.09□□□□□ -1.27
RFX3-210ENST00000457373 IGHV3-16A0A0C4DH30 117 aa7.09□□□□□ -1.27
RFX3-210ENST00000457373 TRBV6-1A0A0K0K1D8 114 aa7.09□□□□□ -1.27
RFX3-210ENST00000457373 IGHV3-53P01767 116 aa7.09□□□□□ -1.27
RFX3-210ENST00000457373 BLOC1S1P78537 153 aa7.09□□□□□ -1.27
RFX3-210ENST00000457373 NHLRC2Q8NBF2 726 aa7.09□□□□□ -1.27
RFX3-210ENST00000457373 ZC2HC1AQ96GY0 325 aa7.09□□□□□ -1.27
RFX3-210ENST00000457373 SPXQ9BT56 116 aa7.09□□□□□ -1.27
RFX3-210ENST00000457373 PLECQ15149 4684 aaKnown RBP7.09□□□□□ -1.27
RFX3-210ENST00000457373 A0A0J9YY99 117 aa7.08□□□□□ -1.28
RFX3-210ENST00000457373 SH2D1AO60880 128 aa7.08□□□□□ -1.28
RFX3-210ENST00000457373 NUDT3O95989 172 aa7.08□□□□□ -1.28
RFX3-210ENST00000457373 LTAP01374 205 aa7.08□□□□□ -1.28
RFX3-210ENST00000457373 ORM1P02763 201 aa7.08□□□□□ -1.28
RFX3-210ENST00000457373 S100A9P06702 114 aaKnown RBP7.08□□□□□ -1.28
RFX3-210ENST00000457373 HOXA5P20719 270 aa7.08□□□□□ -1.28
RFX3-210ENST00000457373 CRIP1P50238 77 aa7.08□□□□□ -1.28
RFX3-210ENST00000457373 LGALS9BQ3B8N2 356 aa7.08□□□□□ -1.28
RFX3-210ENST00000457373 BAGE2Q86Y30 109 aa7.08□□□□□ -1.28
RFX3-210ENST00000457373 TXNDC17Q9BRA2 123 aa7.08□□□□□ -1.28
RFX3-210ENST00000457373 DYNC2H1Q8NCM8 4307 aaKnown RBP7.07□□□□□ -1.28
RFX3-210ENST00000457373 IGKV3D-20A0A0C4DH25 116 aa7.07□□□□□ -1.28
RFX3-210ENST00000457373 B5MCH6 92 aa7.07□□□□□ -1.28
RFX3-210ENST00000457373 M0R036 132 aa7.07□□□□□ -1.28
RFX3-210ENST00000457373 BCL2P10415 239 aa7.07□□□□□ -1.28
RFX3-210ENST00000457373 C15orf53Q8NAA6 179 aa7.07□□□□□ -1.28
RFX3-210ENST00000457373 MED9Q9NWA0 146 aa7.07□□□□□ -1.28
RFX3-210ENST00000457373 KMT2CQ8NEZ4 4911 aaKnown RBP7.07□□□□□ -1.28
RFX3-210ENST00000457373 TRAV26-1A0A087WT03 109 aa7.06□□□□□ -1.28
RFX3-210ENST00000457373 TMSB15BA0A087X1C1 80 aa7.06□□□□□ -1.28
RFX3-210ENST00000457373 GRIFINA4D1Z8 144 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms