RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 TVP23BQ9NYZ1 205 aa2.44□□□□□ -2.02
CUL3-208ENST00000454323 NAT8Q9UHE5 227 aa2.44□□□□□ -2.02
CUL3-208ENST00000454323 SMPXQ9UHP9 88 aa2.44□□□□□ -2.02
CUL3-208ENST00000454323 ASB4Q9Y574 426 aa2.44□□□□□ -2.02
CUL3-208ENST00000454323 NINQ8N4C6 2090 aa2.44□□□□□ -2.02
CUL3-208ENST00000454323 ARHGAP32A7KAX9 2087 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 TRBV19A0A075B6N1 114 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 TRAV41A0A0B4J266 112 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 SDHAF1A6NFY7 115 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 MRPL33O75394 65 aaKnown RBP2.43□□□□□ -2.02
CUL3-208ENST00000454323 FUSP35637 526 aaKnown RBP eCLIP2.43□□□□□ -2.02
CUL3-208ENST00000454323 ATP5G3P48201 142 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 EMP1P54849 157 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 SARNPP82979 210 aaKnown RBP2.43□□□□□ -2.02
CUL3-208ENST00000454323 SS18Q15532 418 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 SNCBQ16143 134 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 SPANXN3Q5MJ09 141 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 SBSPONQ8IVN8 264 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 RPP25LQ8N5L8 163 aaKnown RBP2.43□□□□□ -2.02
CUL3-208ENST00000454323 OR13C6PQ8NH95 151 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 TERB2Q8NHR7 220 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 PRNDQ9UKY0 176 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 UFC1Q9Y3C8 167 aa2.43□□□□□ -2.02
CUL3-208ENST00000454323 TRAV38-1A0A0B4J264 116 aa2.42□□□□□ -2.02
CUL3-208ENST00000454323 SPI1P17947 270 aa2.42□□□□□ -2.02
CUL3-208ENST00000454323 ZNF90Q03938 601 aa2.42□□□□□ -2.02
CUL3-208ENST00000454323 PDZD9Q8IXQ8 264 aa2.42□□□□□ -2.02
CUL3-208ENST00000454323 EFCAB11Q9BUY7 163 aa2.42□□□□□ -2.02
CUL3-208ENST00000454323 SS18L2Q9UHA2 77 aa2.42□□□□□ -2.02
CUL3-208ENST00000454323 TIMM9Q9Y5J7 89 aa2.42□□□□□ -2.02
CUL3-208ENST00000454323 ARFGEF3Q5TH69 2177 aa2.42□□□□□ -2.02
CUL3-208ENST00000454323 DNAH3Q8TD57 4116 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 H7C2G1 150 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 DEFA4P12838 97 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 CBR1P16152 277 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 GLRXP35754 106 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 NCALDP61601 193 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 PSPHP78330 225 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 C3orf33Q6P1S2 294 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 LCA10Q71F78 164 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 LYSTQ99698 3801 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 CHST6Q9GZX3 395 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 SH3BGRL3Q9H299 93 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 BIN3Q9NQY0 253 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 PRO2289Q9P1D8 64 aa2.41□□□□□ -2.02
CUL3-208ENST00000454323 DNAH9Q9NYC9 4486 aa2.4□□□□□ -2.02
CUL3-208ENST00000454323 IGHV3-64A0A075B6Q5 118 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 G3V2T6 193 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 H0YJX3 145 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 J3QRK9 145 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 PPBPP02775 128 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 RPS4Y1P22090 263 aaKnown RBP2.4□□□□□ -2.03
CUL3-208ENST00000454323 SRIP30626 198 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 SERPINB1P30740 379 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 PIGPP57054 158 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 RHOBP62745 196 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 GNG5P63218 68 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 SUPT4H1P63272 117 aaKnown RBP2.4□□□□□ -2.03
CUL3-208ENST00000454323 SPRNQ5BIV9 151 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 SLC48A1Q6P1K1 146 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 PFN4Q8NHR9 129 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 ZHX1-C8orf76Q96EF9 292 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 MRPS24Q96EL2 167 aaKnown RBP2.4□□□□□ -2.03
CUL3-208ENST00000454323 LYRM2Q9NU23 88 aaPredicted RBP2.4□□□□□ -2.03
CUL3-208ENST00000454323 ERGIC3Q9Y282 383 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 AMMECR1Q9Y4X0 333 aaPredicted RBP2.4□□□□□ -2.03
CUL3-208ENST00000454323 KIAA1109Q2LD37 5005 aa2.4□□□□□ -2.03
CUL3-208ENST00000454323 HEATR5BQ9P2D3 2071 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 PPP5D1E7EU14 171 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 SLC22A1O15245 554 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 IFNA7P01567 189 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 RPSAP08865 295 aaKnown RBP2.39□□□□□ -2.03
CUL3-208ENST00000454323 NFYAP23511 347 aaPredicted RBP2.39□□□□□ -2.03
CUL3-208ENST00000454323 PHBP35232 272 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 TCTAP57738 103 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 PRB3Q04118 309 aaPredicted RBP2.39□□□□□ -2.03
CUL3-208ENST00000454323 TSNQ15631 228 aaKnown RBP2.39□□□□□ -2.03
CUL3-208ENST00000454323 TMEM155Q4W5P6 130 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 LINC01554Q52M75 96 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 AKR1C8PQ5T2L2 129 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 FAM27BQ5VT28 67 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 MIR17HGQ75NE6 70 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 AAED1Q7RTV5 226 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 GRINAQ7Z429 371 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 LRRC28Q86X40 367 aaPredicted RBP2.39□□□□□ -2.03
CUL3-208ENST00000454323 DNAJC30Q96LL9 226 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 SCGB3A1Q96QR1 104 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 SLC39A9Q9NUM3 307 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 TMEM106BQ9NUM4 274 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 NDUFB11Q9NX14 153 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 DSPPQ9NZW4 1301 aa2.39□□□□□ -2.03
CUL3-208ENST00000454323 DMBT1Q9UGM3 2413 aaPredicted RBP2.38□□□□□ -2.03
CUL3-208ENST00000454323 A0A1B0GV72 72 aa2.38□□□□□ -2.03
CUL3-208ENST00000454323 TCRBV4S1A1TA0A5B7 111 aa2.38□□□□□ -2.03
CUL3-208ENST00000454323 IGKV1-16P04430 117 aa2.38□□□□□ -2.03
CUL3-208ENST00000454323 IFI30P13284 250 aa2.38□□□□□ -2.03
CUL3-208ENST00000454323 EXOC3-AS1Q8N2X6 119 aa2.38□□□□□ -2.03
CUL3-208ENST00000454323 TMEM133Q9H2Q1 129 aa2.38□□□□□ -2.03
CUL3-208ENST00000454323 ACER3Q9NUN7 267 aa2.38□□□□□ -2.03
CUL3-208ENST00000454323 SLC35A3Q9Y2D2 325 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms