RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PCP2Q8IVA1 136 aa12.97□□□□□ -0.33
TCOF1-206ENST00000445265 MSRB1Q9NZV6 116 aa12.97□□□□□ -0.33
TCOF1-206ENST00000445265 FBXL19-AS1Q494R0 122 aa12.96□□□□□ -0.33
TCOF1-206ENST00000445265 CEND1Q8N111 149 aa12.96□□□□□ -0.33
TCOF1-206ENST00000445265 SDHAF1A6NFY7 115 aa12.96□□□□□ -0.33
TCOF1-206ENST00000445265 FOXE3Q13461 319 aa12.96□□□□□ -0.33
TCOF1-206ENST00000445265 FANCD2OSQ96PS1 177 aa12.96□□□□□ -0.33
TCOF1-206ENST00000445265 SPG11Q96JI7 2443 aa12.96□□□□□ -0.33
TCOF1-206ENST00000445265 TRGV2A0A075B6R0 118 aa12.96□□□□□ -0.34
TCOF1-206ENST00000445265 SYNJ2BPP57105 145 aa12.96□□□□□ -0.34
TCOF1-206ENST00000445265 ZNF493Q6ZR52 646 aa12.96□□□□□ -0.34
TCOF1-206ENST00000445265 PRADC1Q9BSG0 188 aa12.96□□□□□ -0.34
TCOF1-206ENST00000445265 DOPEY2Q9Y3R5 2298 aa12.96□□□□□ -0.34
TCOF1-206ENST00000445265 IGHV7-4-1A0A0J9YVY3 117 aa12.95□□□□□ -0.34
TCOF1-206ENST00000445265 IGHV4-39P01824 125 aa12.95□□□□□ -0.34
TCOF1-206ENST00000445265 Q8NA96 180 aa12.95□□□□□ -0.34
TCOF1-206ENST00000445265 SPATA12Q7Z6I5 190 aa12.95□□□□□ -0.34
TCOF1-206ENST00000445265 LINC01356Q8N9X3 169 aa12.95□□□□□ -0.34
TCOF1-206ENST00000445265 GATA1P15976 413 aaPredicted RBP12.95□□□□□ -0.34
TCOF1-206ENST00000445265 SP5Q6BEB4 398 aaPredicted RBP12.95□□□□□ -0.34
TCOF1-206ENST00000445265 IGHV3-73A0A0B4J1V6 119 aa12.94□□□□□ -0.34
TCOF1-206ENST00000445265 MYCNOSP40205 109 aa12.94□□□□□ -0.34
TCOF1-206ENST00000445265 C1orf159Q96HA4 380 aa12.94□□□□□ -0.34
TCOF1-206ENST00000445265 F8W1H4 67 aa12.94□□□□□ -0.34
TCOF1-206ENST00000445265 IGKV3D-20A0A0C4DH25 116 aa12.93□□□□□ -0.34
TCOF1-206ENST00000445265 CRYGBP07316 175 aa12.93□□□□□ -0.34
TCOF1-206ENST00000445265 LY6G5BQ8NDX9 201 aa12.93□□□□□ -0.34
TCOF1-206ENST00000445265 IGHV1OR15-1A0A075B7D0 117 aa12.93□□□□□ -0.34
TCOF1-206ENST00000445265 M0R2P5 195 aa12.93□□□□□ -0.34
TCOF1-206ENST00000445265 GTSF1LQ9H1H1 148 aa12.93□□□□□ -0.34
TCOF1-206ENST00000445265 FSTL3O95633 263 aa12.92□□□□□ -0.34
TCOF1-206ENST00000445265 CDKN1BP46527 198 aa12.92□□□□□ -0.34
TCOF1-206ENST00000445265 SPINK13Q1W4C9 94 aa12.92□□□□□ -0.34
TCOF1-206ENST00000445265 TIMM21Q9BVV7 248 aa12.92□□□□□ -0.34
TCOF1-206ENST00000445265 TOMM7Q9P0U1 55 aa12.92□□□□□ -0.34
TCOF1-206ENST00000445265 TAX1BP3O14907 124 aa12.92□□□□□ -0.34
TCOF1-206ENST00000445265 A0A1W2PRX2 142 aa12.92□□□□□ -0.34
TCOF1-206ENST00000445265 MORN3Q6PF18 240 aaPredicted RBP12.92□□□□□ -0.34
TCOF1-206ENST00000445265 PCNTO95613 3336 aa12.91□□□□□ -0.34
TCOF1-206ENST00000445265 TRBV25-1A0A075B6N4 114 aa12.91□□□□□ -0.34
TCOF1-206ENST00000445265 PRAC2D3DTV9 90 aa12.91□□□□□ -0.34
TCOF1-206ENST00000445265 BOD1L2Q8IYS8 172 aa12.91□□□□□ -0.34
TCOF1-206ENST00000445265 OR13C6PQ8NH95 151 aa12.91□□□□□ -0.34
TCOF1-206ENST00000445265 SRSF2Q01130 221 aaKnown RBP12.91□□□□□ -0.34
TCOF1-206ENST00000445265 ATP6V0BQ99437 205 aa12.91□□□□□ -0.34
TCOF1-206ENST00000445265 TRBV20-1A0A075B6N2 111 aa12.9□□□□□ -0.34
TCOF1-206ENST00000445265 I3L3M4 83 aa12.9□□□□□ -0.34
TCOF1-206ENST00000445265 DEFB131AP59861 70 aa12.9□□□□□ -0.34
TCOF1-206ENST00000445265 RPL36AP83881 106 aaKnown RBP12.9□□□□□ -0.34
TCOF1-206ENST00000445265 RPL36ALQ969Q0 106 aaKnown RBP12.9□□□□□ -0.34
TCOF1-206ENST00000445265 ETDBQ3ZM63 59 aa12.9□□□□□ -0.34
TCOF1-206ENST00000445265 C16orf54Q6UWD8 224 aa12.9□□□□□ -0.34
TCOF1-206ENST00000445265 PTPRQQ9UMZ3 2332 aa12.9□□□□□ -0.34
TCOF1-206ENST00000445265 INSP01308 110 aa12.9□□□□□ -0.35
TCOF1-206ENST00000445265 ADORA2A-AS1P86434 159 aa12.9□□□□□ -0.35
TCOF1-206ENST00000445265 NAV3Q8IVL0 2385 aa12.89□□□□□ -0.35
TCOF1-206ENST00000445265 K7ERJ3 54 aa12.89□□□□□ -0.35
TCOF1-206ENST00000445265 RHODO00212 210 aa12.89□□□□□ -0.35
TCOF1-206ENST00000445265 NEGR1Q7Z3B1 354 aa12.89□□□□□ -0.35
TCOF1-206ENST00000445265 SPXQ9BT56 116 aa12.89□□□□□ -0.35
TCOF1-206ENST00000445265 PRSS29PA6NIE9 313 aa12.89□□□□□ -0.35
TCOF1-206ENST00000445265 CMC4P56277 68 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-206ENST00000445265 C12orf74Q32Q52 190 aa12.89□□□□□ -0.35
TCOF1-206ENST00000445265 C9orf47Q6ZRZ4 202 aa12.89□□□□□ -0.35
TCOF1-206ENST00000445265 PF4P02776 101 aa12.89□□□□□ -0.35
TCOF1-206ENST00000445265 F6UB75 175 aa12.88□□□□□ -0.35
TCOF1-206ENST00000445265 ATXN8Q156A1 80 aa12.88□□□□□ -0.35
TCOF1-206ENST00000445265 LCNL1Q6ZST4 164 aa12.88□□□□□ -0.35
TCOF1-206ENST00000445265 HIGD1BQ9P298 99 aa12.88□□□□□ -0.35
TCOF1-206ENST00000445265 KLK9Q9UKQ9 250 aa12.88□□□□□ -0.35
TCOF1-206ENST00000445265 GNRH2O43555 120 aa12.88□□□□□ -0.35
TCOF1-206ENST00000445265 ODF3BA8MYP8 253 aa12.87□□□□□ -0.35
TCOF1-206ENST00000445265 ZFP36P26651 326 aaKnown RBP12.87□□□□□ -0.35
TCOF1-206ENST00000445265 C5orf56Q8N8D9 126 aa12.87□□□□□ -0.35
TCOF1-206ENST00000445265 ACACBO00763 2458 aa12.87□□□□□ -0.35
TCOF1-206ENST00000445265 ADARB2-AS1A8MUL3 147 aa12.87□□□□□ -0.35
TCOF1-206ENST00000445265 RNASE8Q8TDE3 154 aaKnown RBP12.87□□□□□ -0.35
TCOF1-206ENST00000445265 SIRPDQ9H106 197 aa12.87□□□□□ -0.35
TCOF1-206ENST00000445265 TRAV8-4A0A0B4J246 113 aa12.86□□□□□ -0.35
TCOF1-206ENST00000445265 TRBV7-9A0A0J9YWB2 115 aa12.86□□□□□ -0.35
TCOF1-206ENST00000445265 RASL10AQ92737 203 aa12.86□□□□□ -0.35
TCOF1-206ENST00000445265 TRGV1A0A0A0MS02 117 aa12.86□□□□□ -0.35
TCOF1-206ENST00000445265 TRGV4A0A0C4DH28 118 aa12.86□□□□□ -0.35
TCOF1-206ENST00000445265 TSPAN13O95857 204 aa12.86□□□□□ -0.35
TCOF1-206ENST00000445265 FAM208BQ5VWN6 2430 aa12.86□□□□□ -0.35
TCOF1-206ENST00000445265 TRAV12-2A0A075B6T6 113 aa12.86□□□□□ -0.35
TCOF1-206ENST00000445265 A0A0U1RRA0 63 aa12.85□□□□□ -0.35
TCOF1-206ENST00000445265 H3BMG7 143 aa12.85□□□□□ -0.35
TCOF1-206ENST00000445265 LY6LH3BQJ8 138 aa12.85□□□□□ -0.35
TCOF1-206ENST00000445265 LINC00310P59036 64 aa12.85□□□□□ -0.35
TCOF1-206ENST00000445265 KLHL30-AS1Q8NEE0 82 aa12.85□□□□□ -0.35
TCOF1-206ENST00000445265 J3QQQ9 107 aa12.84□□□□□ -0.35
TCOF1-206ENST00000445265 ODF1Q14990 250 aa12.84□□□□□ -0.35
TCOF1-206ENST00000445265 C10orf126Q8N4M7 172 aa12.84□□□□□ -0.35
TCOF1-206ENST00000445265 LOXL1Q08397 574 aaPredicted RBP12.84□□□□□ -0.35
TCOF1-206ENST00000445265 TCTEX1D4Q5JR98 221 aa12.84□□□□□ -0.35
TCOF1-206ENST00000445265 C9JAW5 83 aa12.84□□□□□ -0.35
TCOF1-206ENST00000445265 J3QLI3 93 aa12.84□□□□□ -0.35
TCOF1-206ENST00000445265 C11orf44Q8N8P7 122 aa12.84□□□□□ -0.35
TCOF1-206ENST00000445265 ELANEP08246 267 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms