RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 BMPR1BO00238 502 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 TIMM17BO60830 172 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 NXPH4O95158 308 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 UBE2D3P61077 147 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 HERVK_113P61574 105 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 LMO4P61968 165 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 UBE2D2P62837 147 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 RPL30P62888 115 aaKnown RBP3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 SS18Q15532 418 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 CEMP1Q6PRD7 247 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 C6orf201Q7Z4U5 140 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 OPRPNQ99935 248 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 CYSTM1Q9H1C7 97 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 TAC3Q9UHF0 121 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 LY96Q9Y6Y9 160 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 PIKFYVEQ9Y2I7 2098 aa3.51□□□□□ -1.85
HMGB3P9-201ENST00000441799 SPTBN2O15020 2390 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 IGHV3OR15-7A0A075B7D8 119 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 RBMY1BA6NDE4 496 aaKnown RBP3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 RBMY1EA6NEQ0 496 aaKnown RBP3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 CPSF4LA6NMK7 179 aaKnown RBP3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 HMGN4O00479 90 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 BCE1O60756 84 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 IGKV1-5P01602 117 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 RBMY1DP0C7P1 496 aaKnown RBP3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 RBMY1A1P0DJD3 496 aaKnown RBP3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 SLC25A16P16260 332 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 GCHFRP30047 84 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 FXYD2P54710 66 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 MFAP2P55001 183 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 PCBD1P61457 104 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 UBE2BP63146 152 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 CXCL6P80162 114 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 ZNF816Q0VGE8 651 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 FAM104BQ5XKR9 115 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 Q6ZTC4 211 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 FOXL2NBQ6ZUU3 175 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 ZNF584Q8IVC4 421 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 SLC25A29Q8N8R3 303 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 NKAPP1Q8N9T2 125 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 ZNF563Q8TA94 476 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 DIRC1Q969H9 104 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 CHCHD1Q96BP2 118 aaKnown RBP3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 SLC25A22Q9H936 323 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 RAI1Q7Z5J4 1906 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 TENM4Q6N022 2769 aa3.5□□□□□ -1.85
HMGB3P9-201ENST00000441799 BRWD1Q9NSI6 2320 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 USP9XQ93008 2570 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 NUP214P35658 2090 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 IGHV6-1A0A0B4J1U7 121 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 A0A0J9YXV3 536 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 TCRBV4S1A1TA0A5B7 111 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 A6NIN4 97 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 C12orf77C9JDV5 145 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 NPYP01303 97 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 CCKP06307 115 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 DYNLT3P51808 116 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 CRYBA2P53672 197 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 SYNJ2BPP57105 145 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 INSL4Q14641 139 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 ZNF876PQ49A33 203 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 C6orf99Q4VX62 202 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 LINC00242Q5T6M2 205 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 C7orf65Q6ZTY9 151 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 MARCH3Q86UD3 253 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 RNASE6Q93091 150 aaKnown RBP3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 TMEM243Q9BU79 118 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 Q9H3A6 140 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 IL36BQ9NZH7 164 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 XCL2Q9UBD3 114 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 EPDR1Q9UM22 224 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 V9GY05 133 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 MYO9BQ13459 2157 aa3.49□□□□□ -1.85
HMGB3P9-201ENST00000441799 IGKV1-9A0A0C4DH69 117 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 A0A1W2PQD3 144 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 C19orf71A6NCJ1 209 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 BUB1B-PAK6H3BSN5 160 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 J3QLW9 94 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 K7ERJ3 54 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 NDUFC1O43677 76 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 IL4P05112 153 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 HMGN2P05204 90 aaKnown RBP3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 RPL18Q07020 188 aaKnown RBP3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 MLF2Q15773 248 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 C11orf71Q6IPW1 123 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 PRNTQ86SH4 94 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 MDP1Q86V88 176 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 CD177Q8N6Q3 437 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 TMEM105Q8N8V8 129 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 ABHD14BQ96IU4 210 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 NHP2Q9NX24 153 aaKnown RBP3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 DEC1Q9P2X7 70 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 DMXL2Q8TDJ6 3036 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 SCN2AQ99250 2005 aa3.48□□□□□ -1.85
HMGB3P9-201ENST00000441799 KMT2EQ8IZD2 1858 aa3.47□□□□□ -1.85
HMGB3P9-201ENST00000441799 MED12LQ86YW9 2145 aa3.47□□□□□ -1.85
HMGB3P9-201ENST00000441799 KALRNO60229 2985 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms