RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 HLA-DRB4X5D2U9 266 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 IGHV4-4A0A075B6R2 117 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 OR11H12B2RN74 326 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 SAP30O75446 220 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 SCGB1D1O95968 90 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 NUTF2P61970 127 aaKnown RBP4.51□□□□□ -1.69
VPS50-205ENST00000441602 JOSD1Q15040 202 aaPredicted RBP4.51□□□□□ -1.69
VPS50-205ENST00000441602 MUC21Q5SSG8 566 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 Q71RC1 249 aaPredicted RBP4.51□□□□□ -1.69
VPS50-205ENST00000441602 C20orf144Q9BQM9 153 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 SELENOKQ9Y6D0 94 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 SPENQ96T58 3664 aaKnown RBP4.51□□□□□ -1.69
VPS50-205ENST00000441602 HIVEP2P31629 2446 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 IGHV1OR15-1A0A075B7D0 117 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 IGKV3-20P01619 116 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 CD300EQ496F6 205 aaPredicted RBP4.51□□□□□ -1.69
VPS50-205ENST00000441602 MRAP2Q96G30 205 aa4.51□□□□□ -1.69
VPS50-205ENST00000441602 TRAV12-3A0A0B4J271 114 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 CD7P09564 240 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 MRPL51Q4U2R6 128 aaKnown RBP4.5□□□□□ -1.69
VPS50-205ENST00000441602 NIT1Q86X76 327 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 STHQ8IWL8 128 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 AMN1Q8IY45 258 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 CLUHP3Q96NS8 147 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 DPH3P1Q9H4G8 78 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 MAP6D1Q9H9H5 199 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 HSPB8Q9UJY1 196 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 CHD6Q8TD26 2715 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 IFITM10A6NMD0 228 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 INSP01308 110 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 LINC00614P0C842 121 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 PRR9Q5T870 116 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 ADAMTSL5Q6ZMM2 481 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 NXT2Q9NPJ8 142 aaKnown RBP4.5□□□□□ -1.69
VPS50-205ENST00000441602 AP5S1Q9NUS5 200 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 C11orf21Q9P2W6 132 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 NBEAQ8NFP9 2946 aa4.5□□□□□ -1.69
VPS50-205ENST00000441602 MUC21A0A0G2JKD1 596 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 MUC21A0A140T8X8 626 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 KNCNA6PVL3 124 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 D6R8Y8 96 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 H3BMM0 161 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 M0R381 172 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 DEFB1P60022 68 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 KRTDAPP60985 99 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 SPINK13Q1W4C9 94 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 OR10AG1Q8NH19 301 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 U3KQK5 164 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 A8MTW9 85 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 TSTD3H0UI37 97 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 TDRG1Q3Y452 100 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 LRBAP50851 2863 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 INSL3P51460 131 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 ZNF415Q09FC8 603 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 PYY3Q5JQD4 70 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 FAM110AQ9BQ89 295 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 MCRIP2Q9BUT9 160 aaKnown RBP4.49□□□□□ -1.69
VPS50-205ENST00000441602 TP53TG3Q9ULZ0 132 aa4.49□□□□□ -1.69
VPS50-205ENST00000441602 CBY3A6NI87 242 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 PCP4L1A6NKN8 68 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 MGPP08493 103 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 TMEM208Q9BTX3 173 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 LEPROTL1O95214 131 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 G0S2P27469 103 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 C1QTNF4Q9BXJ3 329 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 GSN-AS1Q9NRJ2 163 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 NUPR1O60356 82 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 PMCHL1Q16048 86 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 C9orf66Q5T8R8 295 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 RCHY1Q96PM5 261 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 MAP1LC3CQ9BXW4 147 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 SCRT2Q9NQ03 307 aa4.48□□□□□ -1.69
VPS50-205ENST00000441602 GNRH2O43555 120 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 NXPH4O95158 308 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 AMTNQ6UX39 209 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 LINC01587Q99440 93 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 LINC00467Q9BRT7 94 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 SPXQ9BT56 116 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 GOLT1BQ9Y3E0 138 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 ITPR3Q14573 2671 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 HELZ2Q9BYK8 2649 aaKnown RBP4.47□□□□□ -1.69
VPS50-205ENST00000441602 TRAV12-2A0A075B6T6 113 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 LOC389332A0A1B0GUA5 103 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 TNFRSF6BO95407 300 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 IGLV1-51P01701 117 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 BTF3P20290 206 aaKnown RBP4.47□□□□□ -1.69
VPS50-205ENST00000441602 LINC00310P59036 64 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 PKIAP61925 76 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 MORN3Q6PF18 240 aaPredicted RBP4.47□□□□□ -1.69
VPS50-205ENST00000441602 MSRB1Q9NZV6 116 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 IGHV3-16A0A0C4DH30 117 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 LINC01549A6NIU2 74 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 F5H697 171 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 H7C1H1 209 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 NCR2O95944 276 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 HBDP02042 147 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 EVI2AP22794 236 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 FAM19A2Q8N3H0 131 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 Q8N8P6 123 aa4.47□□□□□ -1.69
VPS50-205ENST00000441602 RNF185Q96GF1 192 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms