RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 TCL1BO95988 128 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 LGALS1P09382 135 aaKnown RBP13.03□□□□□ -0.32
PMS1-213ENST00000441310 LOXP28300 417 aaPredicted RBP13.03□□□□□ -0.32
PMS1-213ENST00000441310 GAGE2BQ13066 116 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 GAGE2EQ4V326 116 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 SCGB1D4Q6XE38 83 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 KLK15Q9H2R5 256 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 GAGE2DQ9UEU5 116 aa13.03□□□□□ -0.32
PMS1-213ENST00000441310 SHANK2-AS3Q9BTD1 123 aa13.02□□□□□ -0.32
PMS1-213ENST00000441310 AAMDCQ9H7C9 122 aa13.02□□□□□ -0.32
PMS1-213ENST00000441310 NDUFV3P56181 108 aaKnown RBP13.02□□□□□ -0.33
PMS1-213ENST00000441310 MRGPRG-AS1Q2M3A8 158 aa13.02□□□□□ -0.33
PMS1-213ENST00000441310 BRI3O95415 125 aa13.01□□□□□ -0.33
PMS1-213ENST00000441310 TMEM78Q5T7P6 136 aa13.01□□□□□ -0.33
PMS1-213ENST00000441310 Q8N8P6 123 aa13.01□□□□□ -0.33
PMS1-213ENST00000441310 CITED1Q99966 193 aa13.01□□□□□ -0.33
PMS1-213ENST00000441310 S4R3C0 116 aa13.01□□□□□ -0.33
PMS1-213ENST00000441310 TRAV26-2A0A0B4J265 109 aa13.01□□□□□ -0.33
PMS1-213ENST00000441310 TRAV4A0A0B4J268 109 aa13.01□□□□□ -0.33
PMS1-213ENST00000441310 IGKV1-17P01599 117 aa13.01□□□□□ -0.33
PMS1-213ENST00000441310 TTC32Q5I0X7 151 aa13.01□□□□□ -0.33
PMS1-213ENST00000441310 ACACBO00763 2458 aa13□□□□□ -0.33
PMS1-213ENST00000441310 IGLC6P0CF74 106 aa13□□□□□ -0.33
PMS1-213ENST00000441310 PLNP26678 52 aa13□□□□□ -0.33
PMS1-213ENST00000441310 IGFL4Q6B9Z1 124 aa13□□□□□ -0.33
PMS1-213ENST00000441310 IGFBPL1Q8WX77 278 aa13□□□□□ -0.33
PMS1-213ENST00000441310 TRAV8-2A0A0B4J237 113 aa13□□□□□ -0.33
PMS1-213ENST00000441310 LINC01546A6NGU7 62 aa13□□□□□ -0.33
PMS1-213ENST00000441310 SNCGO76070 127 aa13□□□□□ -0.33
PMS1-213ENST00000441310 CACNA1AO00555 2505 aa13□□□□□ -0.33
PMS1-213ENST00000441310 RHODO00212 210 aa13□□□□□ -0.33
PMS1-213ENST00000441310 CRLF1O75462 422 aa13□□□□□ -0.33
PMS1-213ENST00000441310 ADORA2A-AS1P86434 159 aa13□□□□□ -0.33
PMS1-213ENST00000441310 KLRB1Q12918 225 aa13□□□□□ -0.33
PMS1-213ENST00000441310 DTX2Q86UW9 622 aa13□□□□□ -0.33
PMS1-213ENST00000441310 PLEKHB2Q96CS7 222 aa13□□□□□ -0.33
PMS1-213ENST00000441310 PRR25Q96S07 402 aa13□□□□□ -0.33
PMS1-213ENST00000441310 VCX2Q9H322 139 aa13□□□□□ -0.33
PMS1-213ENST00000441310 LINC00574Q9H8X3 128 aa13□□□□□ -0.33
PMS1-213ENST00000441310 FABP5P3A8MUU1 101 aa12.99□□□□□ -0.33
PMS1-213ENST00000441310 TMEM262E9PQX1 116 aa12.99□□□□□ -0.33
PMS1-213ENST00000441310 H3BRN7 92 aa12.99□□□□□ -0.33
PMS1-213ENST00000441310 CLEC3BP05452 202 aa12.99□□□□□ -0.33
PMS1-213ENST00000441310 SCGB1C2P0DMR2 95 aa12.99□□□□□ -0.33
PMS1-213ENST00000441310 LAGE3Q14657 143 aa12.99□□□□□ -0.33
PMS1-213ENST00000441310 ZFYVE26Q68DK2 2539 aa12.99□□□□□ -0.33
PMS1-213ENST00000441310 ZNF815PA8K554 130 aa12.99□□□□□ -0.33
PMS1-213ENST00000441310 B9A039 149 aa12.99□□□□□ -0.33
PMS1-213ENST00000441310 COX7A1P24310 79 aa12.99□□□□□ -0.33
PMS1-213ENST00000441310 PLGLAQ15195 96 aa12.99□□□□□ -0.33
PMS1-213ENST00000441310 LINC01559Q495D7 138 aa12.99□□□□□ -0.33
PMS1-213ENST00000441310 UBE2D3P61077 147 aa12.98□□□□□ -0.33
PMS1-213ENST00000441310 UBE2D2P62837 147 aa12.98□□□□□ -0.33
PMS1-213ENST00000441310 LYPD1Q8N2G4 141 aa12.98□□□□□ -0.33
PMS1-213ENST00000441310 IGLV2-18A0A075B6J9 118 aa12.98□□□□□ -0.33
PMS1-213ENST00000441310 SCGB2A1O75556 95 aa12.98□□□□□ -0.33
PMS1-213ENST00000441310 SRD5A1P18405 259 aa12.98□□□□□ -0.33
PMS1-213ENST00000441310 F8VRH5 84 aa12.97□□□□□ -0.33
PMS1-213ENST00000441310 PRADC1Q9BSG0 188 aa12.97□□□□□ -0.33
PMS1-213ENST00000441310 HIF1ANQ9NWT6 349 aa12.97□□□□□ -0.33
PMS1-213ENST00000441310 H7C1H1 209 aa12.97□□□□□ -0.33
PMS1-213ENST00000441310 TRGV3P03979 118 aa12.97□□□□□ -0.33
PMS1-213ENST00000441310 UBE2D1P51668 147 aa12.97□□□□□ -0.33
PMS1-213ENST00000441310 RNF125Q96EQ8 232 aa12.97□□□□□ -0.33
PMS1-213ENST00000441310 UCNP55089 124 aa12.96□□□□□ -0.33
PMS1-213ENST00000441310 LYRM7Q5U5X0 104 aa12.96□□□□□ -0.33
PMS1-213ENST00000441310 FAM159AQ6UWV7 190 aa12.96□□□□□ -0.33
PMS1-213ENST00000441310 OR11H6Q8NGC7 330 aa12.96□□□□□ -0.33
PMS1-213ENST00000441310 IGHV1-8P0DP01 117 aa12.96□□□□□ -0.33
PMS1-213ENST00000441310 IFITM1P13164 125 aa12.96□□□□□ -0.33
PMS1-213ENST00000441310 ZNF575Q86XF7 245 aa12.96□□□□□ -0.33
PMS1-213ENST00000441310 LINC01619G3V211 115 aa12.96□□□□□ -0.34
PMS1-213ENST00000441310 TMEM30BQ3MIR4 351 aa12.96□□□□□ -0.34
PMS1-213ENST00000441310 TMEM155Q4W5P6 130 aa12.96□□□□□ -0.34
PMS1-213ENST00000441310 KLHL30-AS1Q8NEE0 82 aa12.96□□□□□ -0.34
PMS1-213ENST00000441310 SLC25A16P16260 332 aa12.95□□□□□ -0.34
PMS1-213ENST00000441310 HLA-DMBP28068 263 aa12.95□□□□□ -0.34
PMS1-213ENST00000441310 ZNF672Q499Z4 452 aaPredicted RBP12.95□□□□□ -0.34
PMS1-213ENST00000441310 PVRIGQ6DKI7 326 aa12.95□□□□□ -0.34
PMS1-213ENST00000441310 ZNF491Q8N8L2 437 aa12.95□□□□□ -0.34
PMS1-213ENST00000441310 MRPS12O15235 138 aaKnown RBP12.95□□□□□ -0.34
PMS1-213ENST00000441310 PPP1R27Q86WC6 154 aa12.95□□□□□ -0.34
PMS1-213ENST00000441310 C3orf56Q8N813 242 aa12.95□□□□□ -0.34
PMS1-213ENST00000441310 I3L2K1 104 aa12.94□□□□□ -0.34
PMS1-213ENST00000441310 Q6ZQT7 251 aa12.94□□□□□ -0.34
PMS1-213ENST00000441310 ONECUT1Q9UBC0 465 aa12.94□□□□□ -0.34
PMS1-213ENST00000441310 C9JAW5 83 aa12.94□□□□□ -0.34
PMS1-213ENST00000441310 ARL3P36405 182 aa12.94□□□□□ -0.34
PMS1-213ENST00000441310 DLX6P56179 175 aa12.94□□□□□ -0.34
PMS1-213ENST00000441310 NDUFA11Q86Y39 141 aa12.94□□□□□ -0.34
PMS1-213ENST00000441310 CD7P09564 240 aa12.93□□□□□ -0.34
PMS1-213ENST00000441310 C1orf122Q6ZSJ8 110 aa12.93□□□□□ -0.34
PMS1-213ENST00000441310 TEX22C9J3V5 150 aa12.92□□□□□ -0.34
PMS1-213ENST00000441310 SLC25A20O43772 301 aa12.92□□□□□ -0.34
PMS1-213ENST00000441310 SCGB3A1Q96QR1 104 aa12.92□□□□□ -0.34
PMS1-213ENST00000441310 SIGLEC9Q9Y336 463 aa12.92□□□□□ -0.34
PMS1-213ENST00000441310 CFAP46Q8IYW2 2715 aa12.92□□□□□ -0.34
PMS1-213ENST00000441310 CRIP2P52943 208 aaPredicted RBP12.92□□□□□ -0.34
PMS1-213ENST00000441310 KAAG1Q9UBP8 84 aa12.92□□□□□ -0.34
PMS1-213ENST00000441310 TNFRSF18Q9Y5U5 241 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms