RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 IGHV3-16A0A0C4DH30 117 aa12.61□□□□□ -0.39
AC004540.1-201ENST00000439120 SERTM2A0A1B0GWG4 89 aa12.61□□□□□ -0.39
AC004540.1-201ENST00000439120 KRTAP10-2P60368 255 aa12.61□□□□□ -0.39
AC004540.1-201ENST00000439120 ERVFC1-1P60608 527 aa12.61□□□□□ -0.39
AC004540.1-201ENST00000439120 NFE4Q86UQ8 179 aa12.61□□□□□ -0.39
AC004540.1-201ENST00000439120 ASB13Q8WXK3 278 aa12.61□□□□□ -0.39
AC004540.1-201ENST00000439120 RYR1P21817 5038 aa12.61□□□□□ -0.39
AC004540.1-201ENST00000439120 MBP02144 154 aa12.6□□□□□ -0.39
AC004540.1-201ENST00000439120 TYMSP04818 313 aa12.6□□□□□ -0.39
AC004540.1-201ENST00000439120 C5orf17Q8NAS9 161 aa12.6□□□□□ -0.39
AC004540.1-201ENST00000439120 OR2G3Q8NGZ4 309 aa12.6□□□□□ -0.39
AC004540.1-201ENST00000439120 SGK494Q96LW2 274 aa12.6□□□□□ -0.39
AC004540.1-201ENST00000439120 PSMG3Q9BT73 122 aaPredicted RBP12.6□□□□□ -0.39
AC004540.1-201ENST00000439120 PTTG1O95997 202 aa12.59□□□□□ -0.39
AC004540.1-201ENST00000439120 STAG3L2P0CL84 134 aa12.59□□□□□ -0.39
AC004540.1-201ENST00000439120 STAG3L3P0CL85 134 aa12.59□□□□□ -0.39
AC004540.1-201ENST00000439120 EVI2AP22794 236 aa12.59□□□□□ -0.39
AC004540.1-201ENST00000439120 RAB24Q969Q5 203 aa12.59□□□□□ -0.39
AC004540.1-201ENST00000439120 TVP23CQ96ET8 276 aa12.59□□□□□ -0.39
AC004540.1-201ENST00000439120 AQP10Q96PS8 301 aa12.59□□□□□ -0.39
AC004540.1-201ENST00000439120 KRTAP4-5Q9BYR2 181 aa12.59□□□□□ -0.39
AC004540.1-201ENST00000439120 ATP6V0CP27449 155 aa12.58□□□□□ -0.4
AC004540.1-201ENST00000439120 GCHFRP30047 84 aa12.58□□□□□ -0.4
AC004540.1-201ENST00000439120 ZFP69Q49AA0 526 aa12.58□□□□□ -0.4
AC004540.1-201ENST00000439120 Q6ZRN7 208 aaPredicted RBP12.58□□□□□ -0.4
AC004540.1-201ENST00000439120 WFDC10BQ8IUB3 73 aa12.58□□□□□ -0.4
AC004540.1-201ENST00000439120 NHLRC2Q8NBF2 726 aa12.58□□□□□ -0.4
AC004540.1-201ENST00000439120 K7EP13 123 aa12.57□□□□□ -0.4
AC004540.1-201ENST00000439120 TCRAP04437 139 aa12.57□□□□□ -0.4
AC004540.1-201ENST00000439120 SERF2P84101 59 aa12.57□□□□□ -0.4
AC004540.1-201ENST00000439120 SH2D6Q7Z4S9 175 aa12.57□□□□□ -0.4
AC004540.1-201ENST00000439120 INO80EQ8NBZ0 244 aaPredicted RBP12.57□□□□□ -0.4
AC004540.1-201ENST00000439120 ACTR3CQ9C0K3 210 aaPredicted RBP12.57□□□□□ -0.4
AC004540.1-201ENST00000439120 TMEM167BQ9NRX6 74 aa12.57□□□□□ -0.4
AC004540.1-201ENST00000439120 HSPG2P98160 4391 aa12.56□□□□□ -0.4
AC004540.1-201ENST00000439120 CXorf1O96002 111 aa12.56□□□□□ -0.4
AC004540.1-201ENST00000439120 TNFRSF18Q9Y5U5 241 aa12.56□□□□□ -0.4
AC004540.1-201ENST00000439120 FBLL1A6NHQ2 334 aaKnown RBP12.55□□□□□ -0.4
AC004540.1-201ENST00000439120 TAAR5O14804 337 aa12.55□□□□□ -0.4
AC004540.1-201ENST00000439120 GCGP01275 180 aa12.55□□□□□ -0.4
AC004540.1-201ENST00000439120 PPT1P50897 306 aa12.55□□□□□ -0.4
AC004540.1-201ENST00000439120 SUMO1P63165 101 aaKnown RBP12.55□□□□□ -0.4
AC004540.1-201ENST00000439120 ZNF876PQ49A33 203 aa12.55□□□□□ -0.4
AC004540.1-201ENST00000439120 SH3BGRL3Q9H299 93 aa12.55□□□□□ -0.4
AC004540.1-201ENST00000439120 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
AC004540.1-201ENST00000439120 MSRB1Q9NZV6 116 aa12.55□□□□□ -0.4
AC004540.1-201ENST00000439120 PSG8Q9UQ74 426 aa12.55□□□□□ -0.4
AC004540.1-201ENST00000439120 LRP1BQ9NZR2 4599 aa12.54□□□□□ -0.4
AC004540.1-201ENST00000439120 LOC100131303A0A0U1RQF7 123 aa12.54□□□□□ -0.4
AC004540.1-201ENST00000439120 GIPP09681 153 aaPredicted RBP12.54□□□□□ -0.4
AC004540.1-201ENST00000439120 FLI1Q01543 452 aaPredicted RBP12.54□□□□□ -0.4
AC004540.1-201ENST00000439120 SMUG1Q53HV7 270 aa12.54□□□□□ -0.4
AC004540.1-201ENST00000439120 PRNTQ86SH4 94 aa12.54□□□□□ -0.4
AC004540.1-201ENST00000439120 Q8N1X5 172 aa12.54□□□□□ -0.4
AC004540.1-201ENST00000439120 CYB561D1Q8N8Q1 229 aa12.54□□□□□ -0.4
AC004540.1-201ENST00000439120 SUN5Q8TC36 379 aa12.54□□□□□ -0.4
AC004540.1-201ENST00000439120 EPDR1Q9UM22 224 aa12.54□□□□□ -0.4
AC004540.1-201ENST00000439120 TNFSF18Q9UNG2 199 aa12.54□□□□□ -0.4
AC004540.1-201ENST00000439120 BORCS7-ASMTA0A0B4J1R7 106 aa12.53□□□□□ -0.4
AC004540.1-201ENST00000439120 CRYGDP07320 174 aa12.53□□□□□ -0.4
AC004540.1-201ENST00000439120 PFN1P07737 140 aaKnown RBP12.53□□□□□ -0.4
AC004540.1-201ENST00000439120 DNAH10OSP0CZ25 163 aa12.53□□□□□ -0.4
AC004540.1-201ENST00000439120 GATA1P15976 413 aaPredicted RBP12.53□□□□□ -0.4
AC004540.1-201ENST00000439120 C10orf126Q8N4M7 172 aa12.53□□□□□ -0.4
AC004540.1-201ENST00000439120 PRADC1Q9BSG0 188 aa12.53□□□□□ -0.4
AC004540.1-201ENST00000439120 SCRT2Q9NQ03 307 aa12.53□□□□□ -0.4
AC004540.1-201ENST00000439120 FXYD6-FXYD2A0A087WZ82 144 aa12.52□□□□□ -0.41
AC004540.1-201ENST00000439120 GGTLC3B5MD39 225 aa12.52□□□□□ -0.41
AC004540.1-201ENST00000439120 CIDEAO60543 219 aa12.52□□□□□ -0.41
AC004540.1-201ENST00000439120 ZNF80P51504 273 aaPredicted RBP12.52□□□□□ -0.41
AC004540.1-201ENST00000439120 SAPCD1Q5SSQ6 148 aa12.52□□□□□ -0.41
AC004540.1-201ENST00000439120 CDPF1Q6NVV7 123 aa12.52□□□□□ -0.41
AC004540.1-201ENST00000439120 TMEM75Q8N9X5 138 aa12.52□□□□□ -0.41
AC004540.1-201ENST00000439120 IFNA7P01567 189 aa12.51□□□□□ -0.41
AC004540.1-201ENST00000439120 Q5BKY6 102 aa12.51□□□□□ -0.41
AC004540.1-201ENST00000439120 RPL7L1Q6DKI1 246 aaKnown RBP12.51□□□□□ -0.41
AC004540.1-201ENST00000439120 ABCA13Q86UQ4 5058 aa12.51□□□□□ -0.41
AC004540.1-201ENST00000439120 IGHV3-73A0A0B4J1V6 119 aa12.5□□□□□ -0.41
AC004540.1-201ENST00000439120 TRAV8-6A0A0B4J262 113 aa12.5□□□□□ -0.41
AC004540.1-201ENST00000439120 RHOHQ15669 191 aa12.5□□□□□ -0.41
AC004540.1-201ENST00000439120 CFAP126Q5VTH2 177 aa12.5□□□□□ -0.41
AC004540.1-201ENST00000439120 SLC25A29Q8N8R3 303 aa12.5□□□□□ -0.41
AC004540.1-201ENST00000439120 C11orf21Q9P2W6 132 aa12.5□□□□□ -0.41
AC004540.1-201ENST00000439120 A0A087WTM6 91 aa12.49□□□□□ -0.41
AC004540.1-201ENST00000439120 IGHV3-38A0A0C4DH36 116 aa12.49□□□□□ -0.41
AC004540.1-201ENST00000439120 A0A1W2PRE2 83 aa12.49□□□□□ -0.41
AC004540.1-201ENST00000439120 RS1O15537 224 aa12.49□□□□□ -0.41
AC004540.1-201ENST00000439120 PSCAO43653 123 aa12.49□□□□□ -0.41
AC004540.1-201ENST00000439120 IGLV2-11P01706 119 aa12.49□□□□□ -0.41
AC004540.1-201ENST00000439120 S100A4P26447 101 aaKnown RBP12.49□□□□□ -0.41
AC004540.1-201ENST00000439120 FUSP35637 526 aaKnown RBP eCLIP12.49□□□□□ -0.41
AC004540.1-201ENST00000439120 TIRAPP58753 221 aa12.49□□□□□ -0.41
AC004540.1-201ENST00000439120 OR10J3Q5JRS4 329 aa12.49□□□□□ -0.41
AC004540.1-201ENST00000439120 C9orf85Q96MD7 179 aa12.49□□□□□ -0.41
AC004540.1-201ENST00000439120 BOLA1Q9Y3E2 137 aa12.49□□□□□ -0.41
AC004540.1-201ENST00000439120 CTXND1A0A1B0GTU2 59 aa12.48□□□□□ -0.41
AC004540.1-201ENST00000439120 TRBV6-4A0A1B0GX49 114 aa12.48□□□□□ -0.41
AC004540.1-201ENST00000439120 ZNF506Q5JVG8 444 aa12.48□□□□□ -0.41
AC004540.1-201ENST00000439120 RNF222A6NCQ9 220 aa12.47□□□□□ -0.41
AC004540.1-201ENST00000439120 PGPEP1LA6NFU8 196 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms