RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 TREM1Q9NP99 234 aa13.67□□□□□ -0.22
HLA-B-250ENST00000434333 M0R2P5 195 aa13.66□□□□□ -0.22
HLA-B-250ENST00000434333 CDC34P49427 236 aaPredicted RBP13.66□□□□□ -0.22
HLA-B-250ENST00000434333 WFDC10BQ8IUB3 73 aa13.66□□□□□ -0.22
HLA-B-250ENST00000434333 SUN5Q8TC36 379 aa13.66□□□□□ -0.22
HLA-B-250ENST00000434333 ORM1P02763 201 aa13.65□□□□□ -0.22
HLA-B-250ENST00000434333 Q8N1X5 172 aa13.65□□□□□ -0.22
HLA-B-250ENST00000434333 HSD17B11Q8NBQ5 300 aa13.65□□□□□ -0.22
HLA-B-250ENST00000434333 SGK494Q96LW2 274 aa13.65□□□□□ -0.22
HLA-B-250ENST00000434333 AQP10Q96PS8 301 aa13.65□□□□□ -0.22
HLA-B-250ENST00000434333 LOC100131303A0A0U1RQF7 123 aa13.64□□□□□ -0.23
HLA-B-250ENST00000434333 ATP6V0CP27449 155 aa13.64□□□□□ -0.23
HLA-B-250ENST00000434333 OR4C5Q8NGB2 326 aa13.64□□□□□ -0.23
HLA-B-250ENST00000434333 PCNPQ8WW12 178 aaKnown RBP13.64□□□□□ -0.23
HLA-B-250ENST00000434333 RAB24Q969Q5 203 aa13.64□□□□□ -0.23
HLA-B-250ENST00000434333 PSMG3Q9BT73 122 aaPredicted RBP13.64□□□□□ -0.23
HLA-B-250ENST00000434333 C11orf21Q9P2W6 132 aa13.64□□□□□ -0.23
HLA-B-250ENST00000434333 LY96Q9Y6Y9 160 aa13.64□□□□□ -0.23
HLA-B-250ENST00000434333 FAT1Q14517 4588 aa13.63□□□□□ -0.23
HLA-B-250ENST00000434333 TCRAP04437 139 aa13.63□□□□□ -0.23
HLA-B-250ENST00000434333 GCHFRP30047 84 aa13.63□□□□□ -0.23
HLA-B-250ENST00000434333 ZNF80P51504 273 aaPredicted RBP13.63□□□□□ -0.23
HLA-B-250ENST00000434333 SDF2L1Q9HCN8 221 aa13.63□□□□□ -0.23
HLA-B-250ENST00000434333 SERTM2A0A1B0GWG4 89 aa13.62□□□□□ -0.23
HLA-B-250ENST00000434333 C9JCJ5 164 aa13.62□□□□□ -0.23
HLA-B-250ENST00000434333 DNAH10OSP0CZ25 163 aa13.62□□□□□ -0.23
HLA-B-250ENST00000434333 FUSP35637 526 aaKnown RBP eCLIP13.62□□□□□ -0.23
HLA-B-250ENST00000434333 Q5BKY6 102 aa13.62□□□□□ -0.23
HLA-B-250ENST00000434333 C5orf17Q8NAS9 161 aa13.62□□□□□ -0.23
HLA-B-250ENST00000434333 KCNS1Q96KK3 526 aa13.62□□□□□ -0.23
HLA-B-250ENST00000434333 IGLV2-11P01706 119 aa13.61□□□□□ -0.23
HLA-B-250ENST00000434333 GATA1P15976 413 aaPredicted RBP13.61□□□□□ -0.23
HLA-B-250ENST00000434333 ERVFC1-1P60608 527 aa13.61□□□□□ -0.23
HLA-B-250ENST00000434333 NFE4Q86UQ8 179 aa13.61□□□□□ -0.23
HLA-B-250ENST00000434333 ASB13Q8WXK3 278 aa13.61□□□□□ -0.23
HLA-B-250ENST00000434333 TXNDC17Q9BRA2 123 aa13.61□□□□□ -0.23
HLA-B-250ENST00000434333 SH3BGRL3Q9H299 93 aa13.61□□□□□ -0.23
HLA-B-250ENST00000434333 GGTLC3B5MD39 225 aa13.6□□□□□ -0.23
HLA-B-250ENST00000434333 PTTG1O95997 202 aa13.6□□□□□ -0.23
HLA-B-250ENST00000434333 SERF2P84101 59 aa13.6□□□□□ -0.23
HLA-B-250ENST00000434333 DPPA3Q6W0C5 159 aa13.6□□□□□ -0.23
HLA-B-250ENST00000434333 PGPEP1Q9NXJ5 209 aa13.6□□□□□ -0.23
HLA-B-250ENST00000434333 PSG8Q9UQ74 426 aa13.6□□□□□ -0.23
HLA-B-250ENST00000434333 TRAV9-2A0A087WT02 112 aa13.59□□□□□ -0.23
HLA-B-250ENST00000434333 A0A087WTM6 91 aa13.59□□□□□ -0.23
HLA-B-250ENST00000434333 K7EP13 123 aa13.59□□□□□ -0.23
HLA-B-250ENST00000434333 TMEM75Q8N9X5 138 aa13.59□□□□□ -0.23
HLA-B-250ENST00000434333 NDFIP1Q9BT67 221 aa13.59□□□□□ -0.23
HLA-B-250ENST00000434333 MED28Q9H204 178 aa13.59□□□□□ -0.23
HLA-B-250ENST00000434333 SCRT2Q9NQ03 307 aa13.59□□□□□ -0.23
HLA-B-250ENST00000434333 MSRB1Q9NZV6 116 aa13.59□□□□□ -0.23
HLA-B-250ENST00000434333 GCGP01275 180 aa13.58□□□□□ -0.24
HLA-B-250ENST00000434333 SUMO1P63165 101 aaKnown RBP13.58□□□□□ -0.24
HLA-B-250ENST00000434333 C9orf85Q96MD7 179 aa13.58□□□□□ -0.24
HLA-B-250ENST00000434333 EPDR1Q9UM22 224 aa13.58□□□□□ -0.24
HLA-B-250ENST00000434333 RNF222A6NCQ9 220 aa13.57□□□□□ -0.24
HLA-B-250ENST00000434333 RS1O15537 224 aa13.57□□□□□ -0.24
HLA-B-250ENST00000434333 MBP02144 154 aa13.57□□□□□ -0.24
HLA-B-250ENST00000434333 EVI2AP22794 236 aa13.57□□□□□ -0.24
HLA-B-250ENST00000434333 TIRAPP58753 221 aa13.57□□□□□ -0.24
HLA-B-250ENST00000434333 FLI1Q01543 452 aaPredicted RBP13.57□□□□□ -0.24
HLA-B-250ENST00000434333 ZNF876PQ49A33 203 aa13.57□□□□□ -0.24
HLA-B-250ENST00000434333 TMEM167BQ9NRX6 74 aa13.57□□□□□ -0.24
HLA-B-250ENST00000434333 TNFSF18Q9UNG2 199 aa13.57□□□□□ -0.24
HLA-B-250ENST00000434333 FBLL1A6NHQ2 334 aaKnown RBP13.56□□□□□ -0.24
HLA-B-250ENST00000434333 TAAR5O14804 337 aa13.56□□□□□ -0.24
HLA-B-250ENST00000434333 EREGO14944 169 aa13.56□□□□□ -0.24
HLA-B-250ENST00000434333 CXorf1O96002 111 aa13.56□□□□□ -0.24
HLA-B-250ENST00000434333 PFN1P07737 140 aaKnown RBP13.56□□□□□ -0.24
HLA-B-250ENST00000434333 GIPP09681 153 aaPredicted RBP13.56□□□□□ -0.24
HLA-B-250ENST00000434333 CFAP126Q5VTH2 177 aa13.56□□□□□ -0.24
HLA-B-250ENST00000434333 CDPF1Q6NVV7 123 aa13.56□□□□□ -0.24
HLA-B-250ENST00000434333 CYB561D1Q8N8Q1 229 aa13.56□□□□□ -0.24
HLA-B-250ENST00000434333 SLC25A29Q8N8R3 303 aa13.56□□□□□ -0.24
HLA-B-250ENST00000434333 ACTR3CQ9C0K3 210 aaPredicted RBP13.56□□□□□ -0.24
HLA-B-250ENST00000434333 K7EQM0 130 aa13.55□□□□□ -0.24
HLA-B-250ENST00000434333 CRYGDP07320 174 aa13.55□□□□□ -0.24
HLA-B-250ENST00000434333 RNASE3P12724 160 aaKnown RBP13.55□□□□□ -0.24
HLA-B-250ENST00000434333 ZNF726P1Q15940 193 aa13.55□□□□□ -0.24
HLA-B-250ENST00000434333 SMUG1Q53HV7 270 aa13.55□□□□□ -0.24
HLA-B-250ENST00000434333 RPL7L1Q6DKI1 246 aaKnown RBP13.55□□□□□ -0.24
HLA-B-250ENST00000434333 SH2D6Q7Z4S9 175 aa13.55□□□□□ -0.24
HLA-B-250ENST00000434333 PRNTQ86SH4 94 aa13.55□□□□□ -0.24
HLA-B-250ENST00000434333 NHLRC2Q8NBF2 726 aa13.55□□□□□ -0.24
HLA-B-250ENST00000434333 PGPEP1LA6NFU8 196 aa13.54□□□□□ -0.24
HLA-B-250ENST00000434333 ZNF506Q5JVG8 444 aa13.54□□□□□ -0.24
HLA-B-250ENST00000434333 PTH2Q96A98 100 aa13.54□□□□□ -0.24
HLA-B-250ENST00000434333 TRBV6-4A0A1B0GX49 114 aa13.53□□□□□ -0.24
HLA-B-250ENST00000434333 A0A1W2PRE2 83 aa13.53□□□□□ -0.24
HLA-B-250ENST00000434333 CIDEAO60543 219 aa13.53□□□□□ -0.24
HLA-B-250ENST00000434333 XGP55808 180 aa13.53□□□□□ -0.24
HLA-B-250ENST00000434333 C10orf126Q8N4M7 172 aa13.53□□□□□ -0.24
HLA-B-250ENST00000434333 LINC00479Q96M42 142 aa13.53□□□□□ -0.24
HLA-B-250ENST00000434333 IGHV3-73A0A0B4J1V6 119 aa13.52□□□□□ -0.25
HLA-B-250ENST00000434333 IGHV3-38A0A0C4DH36 116 aa13.52□□□□□ -0.25
HLA-B-250ENST00000434333 PPT1P50897 306 aa13.52□□□□□ -0.25
HLA-B-250ENST00000434333 KRTAP10-1P60331 282 aa13.52□□□□□ -0.25
HLA-B-250ENST00000434333 RHOHQ15669 191 aa13.52□□□□□ -0.25
HLA-B-250ENST00000434333 ZFP69Q49AA0 526 aa13.52□□□□□ -0.25
HLA-B-250ENST00000434333 LINC01556Q5JQF7 62 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms