RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 H3BRN7 92 aa6.27□□□□□ -1.41
VTI1A-202ENST00000432306 CCL24O00175 119 aa6.27□□□□□ -1.41
VTI1A-202ENST00000432306 TNFRSF13BO14836 293 aaPredicted RBP6.27□□□□□ -1.41
VTI1A-202ENST00000432306 RNASE1P07998 156 aaKnown RBP6.27□□□□□ -1.41
VTI1A-202ENST00000432306 CACNG7P62955 275 aa6.27□□□□□ -1.41
VTI1A-202ENST00000432306 LOXL1Q08397 574 aaPredicted RBP6.27□□□□□ -1.41
VTI1A-202ENST00000432306 TCTEX1D4Q5JR98 221 aa6.27□□□□□ -1.41
VTI1A-202ENST00000432306 C10orf55Q5SWW7 151 aa6.27□□□□□ -1.41
VTI1A-202ENST00000432306 DUX4L9Q6RFH8 374 aaPredicted RBP6.27□□□□□ -1.41
VTI1A-202ENST00000432306 GFRALQ6UXV0 394 aa6.27□□□□□ -1.41
VTI1A-202ENST00000432306 SRSF12Q8WXF0 261 aaKnown RBP6.27□□□□□ -1.41
VTI1A-202ENST00000432306 PRELID3AQ96N28 172 aa6.27□□□□□ -1.41
VTI1A-202ENST00000432306 SHANK2-AS3Q9BTD1 123 aa6.27□□□□□ -1.41
VTI1A-202ENST00000432306 PSG8Q9UQ74 426 aa6.27□□□□□ -1.41
VTI1A-202ENST00000432306 F11RQ9Y624 299 aaKnown RBP6.27□□□□□ -1.41
VTI1A-202ENST00000432306 DYSFO75923 2080 aa6.27□□□□□ -1.41
VTI1A-202ENST00000432306 DSCAML1Q8TD84 2053 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 PRRC2AP48634 2157 aaKnown RBP6.26□□□□□ -1.41
VTI1A-202ENST00000432306 TRAV8-1A0A0A6YYK1 113 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 TEX48A0A1B0GUV7 120 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 A0A1B0GWB2 263 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 D6R8Y8 96 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 NDUFS7O75251 213 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 IGHV1-46P01743 117 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 FAM106CPP0CH98 169 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 KRTAP10-9P60411 292 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 FAM106AQ4KMX7 169 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 RUSC1-AS1Q66K80 236 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 GOLT1AQ6ZVE7 132 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 Q71RC1 249 aaPredicted RBP6.26□□□□□ -1.41
VTI1A-202ENST00000432306 PRNTQ86SH4 94 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 FAM216BQ8N7L0 139 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 OR8A1Q8NGG7 326 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 DCHS2Q6V1P9 2916 aa6.26□□□□□ -1.41
VTI1A-202ENST00000432306 I3L2K1 104 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 IGLC6P0CF74 106 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 S100A7P31151 101 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 RPL27AP46776 148 aaKnown RBP6.25□□□□□ -1.41
VTI1A-202ENST00000432306 DLX6P56179 175 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 TNFAIP6P98066 277 aaPredicted RBP6.25□□□□□ -1.41
VTI1A-202ENST00000432306 MRPL51Q4U2R6 128 aaKnown RBP6.25□□□□□ -1.41
VTI1A-202ENST00000432306 PCP2Q8IVA1 136 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 PRR26Q8N8Z3 221 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 CNEP1R1Q8N9A8 125 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 ZNF502Q8TBZ5 544 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 CCL13Q99616 98 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 RNF5Q99942 180 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 PROCRQ9UNN8 238 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 AKAP6Q13023 2319 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 GAGE12HA6NDE8 117 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 SPRY3O43610 288 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 ENSAO43768 121 aaKnown RBP6.25□□□□□ -1.41
VTI1A-202ENST00000432306 AZU1P20160 251 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 LOXP28300 417 aaPredicted RBP6.25□□□□□ -1.41
VTI1A-202ENST00000432306 HOXD3P31249 432 aaPredicted RBP6.25□□□□□ -1.41
VTI1A-202ENST00000432306 FXYD2P54710 66 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 FAM201AQ5SY85 155 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 CEND1Q8N111 149 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 NUP37Q8NFH4 326 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 CHAC1Q9BUX1 264 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 ZNRD1Q9P1U0 126 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 HILPDAQ9Y5L2 63 aa6.25□□□□□ -1.41
VTI1A-202ENST00000432306 TRAV17A0A0B4J275 112 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 IGKV1-17P01599 117 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 FCER1GP30273 86 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 PLGLAQ15195 96 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 PRR31Q5SQ13 230 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 LYZL1Q6UWQ5 148 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 AMN1Q8IY45 258 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 EXOC3-AS1Q8N2X6 119 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 ATP6V0E2Q8NHE4 81 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 NXT2Q9NPJ8 142 aaKnown RBP6.24□□□□□ -1.41
VTI1A-202ENST00000432306 KAAG1Q9UBP8 84 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 PRO0461Q9UI25 63 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 VPREB3Q9UKI3 123 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 PLA2G2DQ9UNK4 145 aa6.24□□□□□ -1.41
VTI1A-202ENST00000432306 TRBV25-1A0A075B6N4 114 aa6.23□□□□□ -1.41
VTI1A-202ENST00000432306 IGLL5B9A064 214 aa6.23□□□□□ -1.41
VTI1A-202ENST00000432306 C19orf84I3L1E1 186 aa6.23□□□□□ -1.41
VTI1A-202ENST00000432306 NPYP01303 97 aa6.23□□□□□ -1.41
VTI1A-202ENST00000432306 SPANXA1Q9NS26 97 aa6.23□□□□□ -1.41
VTI1A-202ENST00000432306 SIGLEC9Q9Y336 463 aa6.23□□□□□ -1.41
VTI1A-202ENST00000432306 CSPG4Q6UVK1 2322 aa6.23□□□□□ -1.41
VTI1A-202ENST00000432306 TINCRA0A1B0GVN0 87 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 IGHV3-48P01763 117 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 IGKCP01834 107 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 NMUP48645 174 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 TMEM155Q4W5P6 130 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 KLF17Q5JT82 389 aaPredicted RBP6.22□□□□□ -1.41
VTI1A-202ENST00000432306 FAM19A1Q7Z5A9 133 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 ZNF575Q86XF7 245 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 ZNF491Q8N8L2 437 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 ARPC1AQ92747 370 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 RAB37Q96AX2 223 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 RNF185Q96GF1 192 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 C18orf15Q96N68 181 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 TMEM133Q9H2Q1 129 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 DKK2Q9UBU2 259 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 TANC2Q9HCD6 1990 aa6.22□□□□□ -1.41
VTI1A-202ENST00000432306 TNCP24821 2201 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms