RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 TRAV12-2A0A075B6T6 113 aa9.12□□□□□ -0.95
SMIM12-203ENST00000426886 J3KRW8 73 aa9.12□□□□□ -0.95
SMIM12-203ENST00000426886 DUSP14O95147 198 aaKnown RBP9.12□□□□□ -0.95
SMIM12-203ENST00000426886 TYMSP04818 313 aa9.12□□□□□ -0.95
SMIM12-203ENST00000426886 AAMDCQ9H7C9 122 aa9.12□□□□□ -0.95
SMIM12-203ENST00000426886 MAP1LC3B2A6NCE7 125 aa9.12□□□□□ -0.95
SMIM12-203ENST00000426886 ARL14EPLP0DKL9 152 aa9.12□□□□□ -0.95
SMIM12-203ENST00000426886 TMEM41BQ5BJD5 291 aa9.12□□□□□ -0.95
SMIM12-203ENST00000426886 SMIM15Q7Z3B0 74 aa9.12□□□□□ -0.95
SMIM12-203ENST00000426886 CSNK1G2-AS1Q8NCQ2 148 aa9.12□□□□□ -0.95
SMIM12-203ENST00000426886 OR10J6PQ8NGY7 276 aa9.12□□□□□ -0.95
SMIM12-203ENST00000426886 ALKBH7Q9BT30 221 aaPredicted RBP9.12□□□□□ -0.95
SMIM12-203ENST00000426886 MAP1LC3BQ9GZQ8 125 aa9.12□□□□□ -0.95
SMIM12-203ENST00000426886 NAT8Q9UHE5 227 aa9.12□□□□□ -0.95
SMIM12-203ENST00000426886 ERCC8Q13216 396 aa9.11□□□□□ -0.95
SMIM12-203ENST00000426886 UBE2V1Q13404 147 aa9.11□□□□□ -0.95
SMIM12-203ENST00000426886 PDE6HQ13956 83 aa9.11□□□□□ -0.95
SMIM12-203ENST00000426886 ADIRFQ15847 76 aa9.11□□□□□ -0.95
SMIM12-203ENST00000426886 AMTNQ6UX39 209 aa9.11□□□□□ -0.95
SMIM12-203ENST00000426886 TMEM256Q8N2U0 113 aa9.11□□□□□ -0.95
SMIM12-203ENST00000426886 C1QTNF4Q9BXJ3 329 aa9.11□□□□□ -0.95
SMIM12-203ENST00000426886 H7BYZ3 331 aa9.11□□□□□ -0.95
SMIM12-203ENST00000426886 NUPR1O60356 82 aa9.11□□□□□ -0.95
SMIM12-203ENST00000426886 STPG4Q8N801 248 aa9.11□□□□□ -0.95
SMIM12-203ENST00000426886 NUDT10Q8NFP7 164 aa9.11□□□□□ -0.95
SMIM12-203ENST00000426886 PAM16Q9Y3D7 125 aa9.11□□□□□ -0.95
SMIM12-203ENST00000426886 CIDEAO60543 219 aa9.1□□□□□ -0.95
SMIM12-203ENST00000426886 ZNF253O75346 499 aa9.1□□□□□ -0.95
SMIM12-203ENST00000426886 ZFAND6Q6FIF0 208 aa9.1□□□□□ -0.95
SMIM12-203ENST00000426886 PQLC2Q6ZP29 291 aa9.1□□□□□ -0.95
SMIM12-203ENST00000426886 Q9H3A6 140 aa9.1□□□□□ -0.95
SMIM12-203ENST00000426886 RPH3ALQ9UNE2 315 aa9.1□□□□□ -0.95
SMIM12-203ENST00000426886 IGKV2-40A0A087WW87 121 aaPredicted RBP9.1□□□□□ -0.95
SMIM12-203ENST00000426886 IGKV2D-40P01614 121 aaPredicted RBP9.1□□□□□ -0.95
SMIM12-203ENST00000426886 PRM2P04554 102 aa9.1□□□□□ -0.95
SMIM12-203ENST00000426886 KIR3DS1Q14943 382 aa9.1□□□□□ -0.95
SMIM12-203ENST00000426886 RNF151Q2KHN1 245 aa9.1□□□□□ -0.95
SMIM12-203ENST00000426886 VAMP8Q9BV40 100 aa9.1□□□□□ -0.95
SMIM12-203ENST00000426886 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
SMIM12-203ENST00000426886 STAG3L2P0CL84 134 aa9.09□□□□□ -0.95
SMIM12-203ENST00000426886 STAG3L3P0CL85 134 aa9.09□□□□□ -0.95
SMIM12-203ENST00000426886 FGF8P55075 233 aaPredicted RBP9.09□□□□□ -0.95
SMIM12-203ENST00000426886 ZNF726P1Q15940 193 aa9.09□□□□□ -0.95
SMIM12-203ENST00000426886 DNAH7Q8WXX0 4024 aa9.09□□□□□ -0.95
SMIM12-203ENST00000426886 PGPA6NDG6 321 aa9.09□□□□□ -0.95
SMIM12-203ENST00000426886 HTN1P15515 57 aa9.09□□□□□ -0.95
SMIM12-203ENST00000426886 SMIM7Q9BQ49 75 aa9.09□□□□□ -0.95
SMIM12-203ENST00000426886 EMP1P54849 157 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 RPL23P62829 140 aaKnown RBP9.08□□□□□ -0.96
SMIM12-203ENST00000426886 CST9LP1Q5W188 147 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 LINC01551Q86U37 167 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 MUC7Q8TAX7 377 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 VGLL1Q99990 258 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 X6R8D5 127 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 IGHV4-28A0A0C4DH34 117 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 HSBP1L1C9JCN9 74 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 CRXO43186 299 aaPredicted RBP9.08□□□□□ -0.96
SMIM12-203ENST00000426886 CT45A10P0DMU9 189 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 GCHFRP30047 84 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 C1orf158Q8N1D5 194 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 OR2D3Q8NGH3 330 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 MBD3L1Q8WWY6 194 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 ANAPC16Q96DE5 110 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 CLUHP3Q96NS8 147 aa9.08□□□□□ -0.96
SMIM12-203ENST00000426886 STARD9Q9P2P6 4700 aa9.07□□□□□ -0.96
SMIM12-203ENST00000426886 AGPAT4-IT1Q9H0P7 198 aa9.07□□□□□ -0.96
SMIM12-203ENST00000426886 CBY3A6NI87 242 aa9.07□□□□□ -0.96
SMIM12-203ENST00000426886 CSN1S1P47710 185 aa9.07□□□□□ -0.96
SMIM12-203ENST00000426886 CMTM2Q8TAZ6 248 aa9.07□□□□□ -0.96
SMIM12-203ENST00000426886 CTXND1A0A1B0GTU2 59 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 A8MTW9 85 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 CXorf1O96002 111 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 RBMY1A1P0DJD3 496 aaKnown RBP9.06□□□□□ -0.96
SMIM12-203ENST00000426886 RBMY1CP0DJD4 496 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 RBMY1FQ15415 496 aaKnown RBP9.06□□□□□ -0.96
SMIM12-203ENST00000426886 Q8NAQ8 132 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 IGF2BP2-AS1Q96M15 143 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 MANBALQ9NQG1 85 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 UBE2G2P60604 165 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 GNG5P63218 68 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 Q8TAT8 98 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 MRPL53Q96EL3 112 aaKnown RBP9.06□□□□□ -0.96
SMIM12-203ENST00000426886 SGK494Q96LW2 274 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 TRAPPC1Q9Y5R8 145 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 COX11Q9Y6N1 276 aa9.06□□□□□ -0.96
SMIM12-203ENST00000426886 TMEM238C9JI98 176 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 INSP01308 110 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 LYPD1Q8N2G4 141 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 LINC01587Q99440 93 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 LAMTOR2Q9Y2Q5 125 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 NPIPB6E9PJ23 425 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 ESDP10768 282 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 CTRLP40313 264 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 SUMO1P63165 101 aaKnown RBP9.05□□□□□ -0.96
SMIM12-203ENST00000426886 TMEM78Q5T7P6 136 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 KCNIP4Q6PIL6 250 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 VPS25Q9BRG1 176 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 OTORQ9NRC9 128 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 TENM2Q9NT68 2774 aa9.05□□□□□ -0.96
SMIM12-203ENST00000426886 TRAV12-3A0A0B4J271 114 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms