RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 PDE6DO43924 150 aa10.52□□□□□ -0.73
TMEM248-204ENST00000424964 LTAP01374 205 aa10.52□□□□□ -0.73
TMEM248-204ENST00000424964 TDRG1Q3Y452 100 aa10.52□□□□□ -0.73
TMEM248-204ENST00000424964 BAGE2Q86Y30 109 aa10.52□□□□□ -0.73
TMEM248-204ENST00000424964 C11orf52Q96A22 123 aa10.52□□□□□ -0.73
TMEM248-204ENST00000424964 ZC2HC1AQ96GY0 325 aa10.52□□□□□ -0.73
TMEM248-204ENST00000424964 MDFICQ9P1T7 246 aa10.52□□□□□ -0.73
TMEM248-204ENST00000424964 TRGV1A0A0A0MS02 117 aa10.51□□□□□ -0.73
TMEM248-204ENST00000424964 RPL35P42766 123 aaKnown RBP10.51□□□□□ -0.73
TMEM248-204ENST00000424964 Q6ZTI0 123 aa10.51□□□□□ -0.73
TMEM248-204ENST00000424964 NHLRC2Q8NBF2 726 aa10.51□□□□□ -0.73
TMEM248-204ENST00000424964 LYPD6BQ8NI32 183 aa10.51□□□□□ -0.73
TMEM248-204ENST00000424964 MED9Q9NWA0 146 aa10.51□□□□□ -0.73
TMEM248-204ENST00000424964 C11orf21Q9P2W6 132 aa10.51□□□□□ -0.73
TMEM248-204ENST00000424964 RBFOX3A6NFN3 312 aa10.5□□□□□ -0.73
TMEM248-204ENST00000424964 ORM1P02763 201 aa10.5□□□□□ -0.73
TMEM248-204ENST00000424964 TYMSP04818 313 aa10.5□□□□□ -0.73
TMEM248-204ENST00000424964 ATP5G1P05496 136 aa10.5□□□□□ -0.73
TMEM248-204ENST00000424964 FAM162BQ5T6X4 162 aa10.5□□□□□ -0.73
TMEM248-204ENST00000424964 COX8CQ7Z4L0 72 aa10.5□□□□□ -0.73
TMEM248-204ENST00000424964 DERL1Q9BUN8 251 aa10.5□□□□□ -0.73
TMEM248-204ENST00000424964 CSMD3Q7Z407 3707 aa10.49□□□□□ -0.73
TMEM248-204ENST00000424964 TRGV2A0A075B6R0 118 aa10.49□□□□□ -0.73
TMEM248-204ENST00000424964 IGHV3-16A0A0C4DH30 117 aa10.49□□□□□ -0.73
TMEM248-204ENST00000424964 F5H768 121 aa10.49□□□□□ -0.73
TMEM248-204ENST00000424964 SPINK4O60575 86 aa10.49□□□□□ -0.73
TMEM248-204ENST00000424964 SH2D1AO60880 128 aa10.49□□□□□ -0.73
TMEM248-204ENST00000424964 CRIP1P50238 77 aa10.49□□□□□ -0.73
TMEM248-204ENST00000424964 LINC00612Q8N6U2 182 aa10.49□□□□□ -0.73
TMEM248-204ENST00000424964 PCNPQ8WW12 178 aaKnown RBP10.49□□□□□ -0.73
TMEM248-204ENST00000424964 SPXQ9BT56 116 aa10.49□□□□□ -0.73
TMEM248-204ENST00000424964 MRPL16Q9NX20 251 aaKnown RBP10.49□□□□□ -0.73
TMEM248-204ENST00000424964 IGHV4-4A0A075B6R2 117 aa10.48□□□□□ -0.73
TMEM248-204ENST00000424964 RAB19A4D1S5 217 aa10.48□□□□□ -0.73
TMEM248-204ENST00000424964 LGALS9BQ3B8N2 356 aa10.48□□□□□ -0.73
TMEM248-204ENST00000424964 EIF5A2Q9GZV4 153 aaKnown RBP10.48□□□□□ -0.73
TMEM248-204ENST00000424964 IGKV3D-20A0A0C4DH25 116 aa10.47□□□□□ -0.73
TMEM248-204ENST00000424964 B4DEV8 164 aa10.47□□□□□ -0.73
TMEM248-204ENST00000424964 M0R036 132 aa10.47□□□□□ -0.73
TMEM248-204ENST00000424964 TCTAP57738 103 aa10.47□□□□□ -0.73
TMEM248-204ENST00000424964 ZNF674Q2M3X9 581 aa10.47□□□□□ -0.73
TMEM248-204ENST00000424964 CENPWQ5EE01 88 aa10.47□□□□□ -0.73
TMEM248-204ENST00000424964 TOR2AQ5JU69 321 aa10.47□□□□□ -0.73
TMEM248-204ENST00000424964 ZNF506Q5JVG8 444 aa10.47□□□□□ -0.73
TMEM248-204ENST00000424964 MLST8Q9BVC4 326 aa10.47□□□□□ -0.73
TMEM248-204ENST00000424964 STARD9Q9P2P6 4700 aa10.47□□□□□ -0.73
TMEM248-204ENST00000424964 M0R2P5 195 aa10.46□□□□□ -0.73
TMEM248-204ENST00000424964 S100A4P26447 101 aaKnown RBP10.46□□□□□ -0.73
TMEM248-204ENST00000424964 GNG4P50150 75 aa10.46□□□□□ -0.73
TMEM248-204ENST00000424964 OR5I1Q13606 314 aa10.46□□□□□ -0.73
TMEM248-204ENST00000424964 PRR27Q6MZM9 219 aa10.46□□□□□ -0.73
TMEM248-204ENST00000424964 FAM210BQ96KR6 192 aa10.46□□□□□ -0.73
TMEM248-204ENST00000424964 NDUFAF3Q9BU61 184 aa10.46□□□□□ -0.73
TMEM248-204ENST00000424964 TENM2Q9NT68 2774 aa10.45□□□□□ -0.74
TMEM248-204ENST00000424964 TMSB15BA0A087X1C1 80 aa10.45□□□□□ -0.74
TMEM248-204ENST00000424964 KRBOX1C9JBD0 128 aa10.45□□□□□ -0.74
TMEM248-204ENST00000424964 MGST1P10620 155 aaKnown RBP10.45□□□□□ -0.74
TMEM248-204ENST00000424964 ASIPP42127 132 aa10.45□□□□□ -0.74
TMEM248-204ENST00000424964 CEBPGP53567 150 aa10.45□□□□□ -0.74
TMEM248-204ENST00000424964 TMEM88Q6PEY1 159 aa10.45□□□□□ -0.74
TMEM248-204ENST00000424964 FAM210AQ96ND0 272 aa10.45□□□□□ -0.74
TMEM248-204ENST00000424964 APLNQ9ULZ1 77 aa10.45□□□□□ -0.74
TMEM248-204ENST00000424964 TMEM250H0YL14 139 aa10.44□□□□□ -0.74
TMEM248-204ENST00000424964 IGHV3-53P01767 116 aa10.44□□□□□ -0.74
TMEM248-204ENST00000424964 RASL10AQ92737 203 aa10.44□□□□□ -0.74
TMEM248-204ENST00000424964 C18orf15Q96N68 181 aa10.44□□□□□ -0.74
TMEM248-204ENST00000424964 MUC4Q99102 2169 aa10.43□□□□□ -0.74
TMEM248-204ENST00000424964 LCE6AA0A183 80 aa10.43□□□□□ -0.74
TMEM248-204ENST00000424964 GRIFINA4D1Z8 144 aa10.43□□□□□ -0.74
TMEM248-204ENST00000424964 C9JCJ5 164 aa10.43□□□□□ -0.74
TMEM248-204ENST00000424964 LY6G6CO95867 125 aa10.43□□□□□ -0.74
TMEM248-204ENST00000424964 IGLV2-8P01709 118 aa10.43□□□□□ -0.74
TMEM248-204ENST00000424964 RNASE3P12724 160 aaKnown RBP10.43□□□□□ -0.74
TMEM248-204ENST00000424964 LINC01559Q495D7 138 aa10.43□□□□□ -0.74
TMEM248-204ENST00000424964 SMIM12Q96EX1 92 aa10.43□□□□□ -0.74
TMEM248-204ENST00000424964 C9orf85Q96MD7 179 aa10.43□□□□□ -0.74
TMEM248-204ENST00000424964 PARLQ9H300 379 aa10.43□□□□□ -0.74
TMEM248-204ENST00000424964 NACAE9PAV3 2078 aa10.42□□□□□ -0.74
TMEM248-204ENST00000424964 PGPEP1LA6NFU8 196 aa10.42□□□□□ -0.74
TMEM248-204ENST00000424964 HOXA5P20719 270 aa10.42□□□□□ -0.74
TMEM248-204ENST00000424964 RAB14P61106 215 aa10.42□□□□□ -0.74
TMEM248-204ENST00000424964 ZNF876PQ49A33 203 aa10.42□□□□□ -0.74
TMEM248-204ENST00000424964 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
TMEM248-204ENST00000424964 TRBV20OR9-2A0A075B6H5 130 aa10.41□□□□□ -0.74
TMEM248-204ENST00000424964 H3BVH4 76 aa10.41□□□□□ -0.74
TMEM248-204ENST00000424964 RPL19P84098 196 aaKnown RBP10.41□□□□□ -0.74
TMEM248-204ENST00000424964 C15orf53Q8NAA6 179 aa10.41□□□□□ -0.74
TMEM248-204ENST00000424964 BIN3Q9NQY0 253 aa10.41□□□□□ -0.74
TMEM248-204ENST00000424964 IL36BQ9NZH7 164 aa10.41□□□□□ -0.74
TMEM248-204ENST00000424964 TRAV26-1A0A087WT03 109 aa10.4□□□□□ -0.74
TMEM248-204ENST00000424964 TRGV4A0A0C4DH28 118 aa10.4□□□□□ -0.74
TMEM248-204ENST00000424964 A0A0J9YY99 117 aa10.4□□□□□ -0.74
TMEM248-204ENST00000424964 NDUFS6O75380 124 aaKnown RBP10.4□□□□□ -0.74
TMEM248-204ENST00000424964 NUDT3O95989 172 aa10.4□□□□□ -0.74
TMEM248-204ENST00000424964 SRP19P09132 144 aaKnown RBP10.4□□□□□ -0.74
TMEM248-204ENST00000424964 SFTA3P0C7M3 94 aa10.4□□□□□ -0.74
TMEM248-204ENST00000424964 ARMS2P0C7Q2 107 aa10.4□□□□□ -0.74
TMEM248-204ENST00000424964 DNLZQ5SXM8 178 aa10.4□□□□□ -0.74
TMEM248-204ENST00000424964 OR4C5Q8NGB2 326 aa10.4□□□□□ -0.74
TMEM248-204ENST00000424964 LINC00476Q8WZB0 136 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms