RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 LINC01619G3V211 115 aa11.39□□□□□ -0.59
CALD1-206ENST00000424922 PMCHP20382 165 aa11.39□□□□□ -0.59
CALD1-206ENST00000424922 EDN2P20800 178 aa11.39□□□□□ -0.59
CALD1-206ENST00000424922 SLURP1P55000 103 aa11.39□□□□□ -0.59
CALD1-206ENST00000424922 NIT1Q86X76 327 aa11.39□□□□□ -0.59
CALD1-206ENST00000424922 OR1N2Q8NGR9 330 aa11.39□□□□□ -0.59
CALD1-206ENST00000424922 DPF1Q92782 380 aa11.39□□□□□ -0.59
CALD1-206ENST00000424922 ZNF479Q96JC4 524 aa11.39□□□□□ -0.59
CALD1-206ENST00000424922 UFC1Q9Y3C8 167 aa11.39□□□□□ -0.59
CALD1-206ENST00000424922 IGHV7-4-1A0A0J9YVY3 117 aa11.38□□□□□ -0.59
CALD1-206ENST00000424922 K7EMT4 169 aa11.38□□□□□ -0.59
CALD1-206ENST00000424922 CT45A10P0DMU9 189 aa11.38□□□□□ -0.59
CALD1-206ENST00000424922 CD33P20138 364 aa11.38□□□□□ -0.59
CALD1-206ENST00000424922 CRIP1P50238 77 aa11.38□□□□□ -0.59
CALD1-206ENST00000424922 NDFIP1Q9BT67 221 aa11.38□□□□□ -0.59
CALD1-206ENST00000424922 TSSC4Q9Y5U2 329 aaPredicted RBP11.38□□□□□ -0.59
CALD1-206ENST00000424922 A0A1B0GUT8 65 aa11.38□□□□□ -0.59
CALD1-206ENST00000424922 RIGQ13278 110 aa11.38□□□□□ -0.59
CALD1-206ENST00000424922 Q8N976 141 aa11.38□□□□□ -0.59
CALD1-206ENST00000424922 RHPN1-AS1Q9BWJ2 59 aa11.38□□□□□ -0.59
CALD1-206ENST00000424922 CHEK1O14757 476 aa11.37□□□□□ -0.59
CALD1-206ENST00000424922 HSBP1O75506 76 aa11.37□□□□□ -0.59
CALD1-206ENST00000424922 ODF1Q14990 250 aa11.37□□□□□ -0.59
CALD1-206ENST00000424922 GLMPQ8WWB7 406 aa11.37□□□□□ -0.59
CALD1-206ENST00000424922 LOC102724200A0A096LPH7 203 aaPredicted RBP11.36□□□□□ -0.59
CALD1-206ENST00000424922 TMEM213A2RRL7 107 aa11.36□□□□□ -0.59
CALD1-206ENST00000424922 LGALS9O00182 355 aa11.36□□□□□ -0.59
CALD1-206ENST00000424922 KRTDAPP60985 99 aa11.36□□□□□ -0.59
CALD1-206ENST00000424922 SELENOKQ9Y6D0 94 aa11.36□□□□□ -0.59
CALD1-206ENST00000424922 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.36□□□□□ -0.59
CALD1-206ENST00000424922 CHCHD1Q96BP2 118 aaKnown RBP11.36□□□□□ -0.59
CALD1-206ENST00000424922 RAX2Q96IS3 184 aa11.36□□□□□ -0.59
CALD1-206ENST00000424922 ATRQ13535 2644 aa11.35□□□□□ -0.59
CALD1-206ENST00000424922 KRTAP10-3P60369 221 aa11.35□□□□□ -0.59
CALD1-206ENST00000424922 SAMD13Q5VXD3 122 aa11.35□□□□□ -0.59
CALD1-206ENST00000424922 BORCS7Q96B45 105 aa11.35□□□□□ -0.59
CALD1-206ENST00000424922 C8orf49Q96NF6 230 aa11.35□□□□□ -0.59
CALD1-206ENST00000424922 PRR25Q96S07 402 aa11.35□□□□□ -0.59
CALD1-206ENST00000424922 VAMP8Q9BV40 100 aa11.35□□□□□ -0.59
CALD1-206ENST00000424922 C3orf79P0CE67 100 aa11.35□□□□□ -0.59
CALD1-206ENST00000424922 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.35□□□□□ -0.59
CALD1-206ENST00000424922 FAM19A2Q8N3H0 131 aa11.35□□□□□ -0.59
CALD1-206ENST00000424922 SLC50A1Q9BRV3 221 aa11.35□□□□□ -0.59
CALD1-206ENST00000424922 TENM1Q9UKZ4 2725 aa11.34□□□□□ -0.59
CALD1-206ENST00000424922 IGKV2-40A0A087WW87 121 aaPredicted RBP11.34□□□□□ -0.59
CALD1-206ENST00000424922 RBAKDNA6NC62 111 aa11.34□□□□□ -0.59
CALD1-206ENST00000424922 H0Y8G0 127 aa11.34□□□□□ -0.59
CALD1-206ENST00000424922 IGKV2D-40P01614 121 aaPredicted RBP11.34□□□□□ -0.59
CALD1-206ENST00000424922 PRB4P10163 310 aaPredicted RBP11.34□□□□□ -0.59
CALD1-206ENST00000424922 RPL11P62913 178 aaKnown RBP11.34□□□□□ -0.59
CALD1-206ENST00000424922 IGFL4Q6B9Z1 124 aa11.34□□□□□ -0.59
CALD1-206ENST00000424922 STPG4Q8N801 248 aa11.34□□□□□ -0.59
CALD1-206ENST00000424922 DLX4Q92988 240 aaPredicted RBP11.34□□□□□ -0.59
CALD1-206ENST00000424922 TMEM189A5PLL7 270 aa11.33□□□□□ -0.6
CALD1-206ENST00000424922 CCL24O00175 119 aa11.33□□□□□ -0.6
CALD1-206ENST00000424922 SH2D1AO60880 128 aa11.33□□□□□ -0.6
CALD1-206ENST00000424922 ARMS2P0C7Q2 107 aa11.33□□□□□ -0.6
CALD1-206ENST00000424922 NTF3P20783 257 aa11.33□□□□□ -0.6
CALD1-206ENST00000424922 RNASEKQ6P5S7 137 aaKnown RBP11.33□□□□□ -0.6
CALD1-206ENST00000424922 PET117Q6UWS5 81 aa11.33□□□□□ -0.6
CALD1-206ENST00000424922 URB1-AS1Q96HZ7 61 aa11.33□□□□□ -0.6
CALD1-206ENST00000424922 C2orf70A6NJV1 201 aa11.33□□□□□ -0.6
CALD1-206ENST00000424922 M0R2Z0 102 aa11.33□□□□□ -0.6
CALD1-206ENST00000424922 NSUN5P1Q3KNT7 163 aa11.33□□□□□ -0.6
CALD1-206ENST00000424922 LCN12Q6JVE5 192 aa11.33□□□□□ -0.6
CALD1-206ENST00000424922 ZNF493Q6ZR52 646 aa11.33□□□□□ -0.6
CALD1-206ENST00000424922 MRPL53Q96EL3 112 aaKnown RBP11.33□□□□□ -0.6
CALD1-206ENST00000424922 IGKV3-7A0A075B6H7 116 aa11.32□□□□□ -0.6
CALD1-206ENST00000424922 ADARB2-AS1A8MUL3 147 aa11.32□□□□□ -0.6
CALD1-206ENST00000424922 FHL3Q13643 280 aa11.32□□□□□ -0.6
CALD1-206ENST00000424922 ASCL2Q99929 193 aa11.32□□□□□ -0.6
CALD1-206ENST00000424922 HLA-DMBP28068 263 aa11.32□□□□□ -0.6
CALD1-206ENST00000424922 TDRG1Q3Y452 100 aa11.32□□□□□ -0.6
CALD1-206ENST00000424922 OR9G4Q8NGQ1 327 aa11.32□□□□□ -0.6
CALD1-206ENST00000424922 LAMTOR2Q9Y2Q5 125 aa11.32□□□□□ -0.6
CALD1-206ENST00000424922 SORL1Q92673 2214 aa11.32□□□□□ -0.6
CALD1-206ENST00000424922 PMCHL1Q16048 86 aa11.31□□□□□ -0.6
CALD1-206ENST00000424922 RNF182Q8N6D2 247 aa11.31□□□□□ -0.6
CALD1-206ENST00000424922 VGLL1Q99990 258 aa11.31□□□□□ -0.6
CALD1-206ENST00000424922 PEMTQ9UBM1 199 aa11.31□□□□□ -0.6
CALD1-206ENST00000424922 ADAMTSL5Q6ZMM2 481 aa11.3□□□□□ -0.6
CALD1-206ENST00000424922 UQCR10Q9UDW1 63 aa11.3□□□□□ -0.6
CALD1-206ENST00000424922 TRAV8-2A0A0B4J237 113 aa11.3□□□□□ -0.6
CALD1-206ENST00000424922 CTRLP40313 264 aa11.3□□□□□ -0.6
CALD1-206ENST00000424922 C16orf92Q96LL3 132 aa11.3□□□□□ -0.6
CALD1-206ENST00000424922 PAM16Q9Y3D7 125 aa11.3□□□□□ -0.6
CALD1-206ENST00000424922 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
CALD1-206ENST00000424922 NDUFA11Q86Y39 141 aa11.29□□□□□ -0.6
CALD1-206ENST00000424922 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
CALD1-206ENST00000424922 LYZL1Q6UWQ5 148 aa11.29□□□□□ -0.6
CALD1-206ENST00000424922 MTURNQ8N3F0 131 aa11.28□□□□□ -0.6
CALD1-206ENST00000424922 FABP5P3A8MUU1 101 aa11.27□□□□□ -0.6
CALD1-206ENST00000424922 SOCS3O14543 225 aa11.27□□□□□ -0.6
CALD1-206ENST00000424922 CSN3P07498 182 aa11.27□□□□□ -0.6
CALD1-206ENST00000424922 IGLC6P0CF74 106 aa11.27□□□□□ -0.6
CALD1-206ENST00000424922 ZNF80P51504 273 aaPredicted RBP11.27□□□□□ -0.6
CALD1-206ENST00000424922 RIPPLY3P57055 190 aa11.27□□□□□ -0.6
CALD1-206ENST00000424922 Q8TAT8 98 aa11.27□□□□□ -0.6
CALD1-206ENST00000424922 U3KQK5 164 aa11.27□□□□□ -0.6
CALD1-206ENST00000424922 IGHV1-24A0A0C4DH33 117 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms