RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SRSF8Q9BRL6 282 aaKnown RBP11.03□□□□□ -0.64
MSH5-206ENST00000423982 DPM3Q9P2X0 92 aa11.03□□□□□ -0.64
MSH5-206ENST00000423982 H3BMG7 143 aa11.03□□□□□ -0.64
MSH5-206ENST00000423982 SMAGPQ0VAQ4 97 aa11.03□□□□□ -0.64
MSH5-206ENST00000423982 ARPC1AQ92747 370 aa11.03□□□□□ -0.64
MSH5-206ENST00000423982 FABP5P3A8MUU1 101 aa11.02□□□□□ -0.64
MSH5-206ENST00000423982 DPM2O94777 84 aa11.02□□□□□ -0.64
MSH5-206ENST00000423982 RNF5Q99942 180 aa11.02□□□□□ -0.64
MSH5-206ENST00000423982 CREBBPQ92793 2442 aa11.02□□□□□ -0.65
MSH5-206ENST00000423982 IGLV2-18A0A075B6J9 118 aa11.02□□□□□ -0.65
MSH5-206ENST00000423982 NDUFA3O95167 84 aa11.02□□□□□ -0.65
MSH5-206ENST00000423982 TMEM11P17152 192 aa11.02□□□□□ -0.65
MSH5-206ENST00000423982 AZU1P20160 251 aa11.02□□□□□ -0.65
MSH5-206ENST00000423982 SAMD13Q5VXD3 122 aa11.02□□□□□ -0.65
MSH5-206ENST00000423982 HIGD1BQ9P298 99 aa11.02□□□□□ -0.65
MSH5-206ENST00000423982 UFC1Q9Y3C8 167 aa11.02□□□□□ -0.65
MSH5-206ENST00000423982 CSPG4Q6UVK1 2322 aa11.02□□□□□ -0.65
MSH5-206ENST00000423982 NXT2Q9NPJ8 142 aaKnown RBP11.01□□□□□ -0.65
MSH5-206ENST00000423982 TSSC4Q9Y5U2 329 aaPredicted RBP11.01□□□□□ -0.65
MSH5-206ENST00000423982 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.01□□□□□ -0.65
MSH5-206ENST00000423982 MAPK1IP1LQ8NDC0 245 aa11.01□□□□□ -0.65
MSH5-206ENST00000423982 NPBQ8NG41 125 aa11.01□□□□□ -0.65
MSH5-206ENST00000423982 CNFNQ9BYD5 112 aa11.01□□□□□ -0.65
MSH5-206ENST00000423982 LINC01546A6NGU7 62 aa11□□□□□ -0.65
MSH5-206ENST00000423982 IGLL5B9A064 214 aa11□□□□□ -0.65
MSH5-206ENST00000423982 PIFOQ8TCI5 191 aa11□□□□□ -0.65
MSH5-206ENST00000423982 KLK15Q9H2R5 256 aa11□□□□□ -0.65
MSH5-206ENST00000423982 ABCA2Q9BZC7 2435 aa11□□□□□ -0.65
MSH5-206ENST00000423982 IGHV4-30-2A0A087WSY4 118 aa11□□□□□ -0.65
MSH5-206ENST00000423982 ETDBQ3ZM63 59 aa11□□□□□ -0.65
MSH5-206ENST00000423982 TM2D2Q9BX73 214 aa11□□□□□ -0.65
MSH5-206ENST00000423982 E9PLD3 99 aa11□□□□□ -0.65
MSH5-206ENST00000423982 ZFP36P26651 326 aaKnown RBP11□□□□□ -0.65
MSH5-206ENST00000423982 Q8N8P6 123 aa11□□□□□ -0.65
MSH5-206ENST00000423982 INSL3P51460 131 aa10.99□□□□□ -0.65
MSH5-206ENST00000423982 ZNF479Q96JC4 524 aa10.99□□□□□ -0.65
MSH5-206ENST00000423982 SPANXB1Q9NS25 103 aaPredicted RBP10.99□□□□□ -0.65
MSH5-206ENST00000423982 C12orf74Q32Q52 190 aa10.99□□□□□ -0.65
MSH5-206ENST00000423982 CLEC2AQ6UVW9 174 aa10.99□□□□□ -0.65
MSH5-206ENST00000423982 TTC9CQ8N5M4 171 aa10.99□□□□□ -0.65
MSH5-206ENST00000423982 NRACQ8N912 160 aa10.99□□□□□ -0.65
MSH5-206ENST00000423982 AGPAT4-IT1Q9H0P7 198 aa10.99□□□□□ -0.65
MSH5-206ENST00000423982 PRRC2AP48634 2157 aaKnown RBP10.98□□□□□ -0.65
MSH5-206ENST00000423982 IGHV4-61A0A0C4DH41 118 aa10.98□□□□□ -0.65
MSH5-206ENST00000423982 J3KRW8 73 aa10.98□□□□□ -0.65
MSH5-206ENST00000423982 LINC01559Q495D7 138 aa10.98□□□□□ -0.65
MSH5-206ENST00000423982 S100A7AQ86SG5 101 aa10.98□□□□□ -0.65
MSH5-206ENST00000423982 FOXI2Q6ZQN5 318 aa10.98□□□□□ -0.65
MSH5-206ENST00000423982 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.97□□□□□ -0.651e-7■■■■□ 22.7
MSH5-206ENST00000423982 ITPR3Q14573 2671 aa10.97□□□□□ -0.65
MSH5-206ENST00000423982 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.97□□□□□ -0.65
MSH5-206ENST00000423982 LY6G5BQ8NDX9 201 aa10.97□□□□□ -0.65
MSH5-206ENST00000423982 OR11H6Q8NGC7 330 aa10.97□□□□□ -0.65
MSH5-206ENST00000423982 TMEM190Q8WZ59 177 aa10.97□□□□□ -0.65
MSH5-206ENST00000423982 ZNF48Q96MX3 618 aaPredicted RBP10.97□□□□□ -0.65
MSH5-206ENST00000423982 HIST1H4GQ99525 98 aa10.97□□□□□ -0.65
MSH5-206ENST00000423982 TEX15Q9BXT5 2789 aa10.97□□□□□ -0.65
MSH5-206ENST00000423982 ATP5LO75964 103 aa10.97□□□□□ -0.65
MSH5-206ENST00000423982 MYOZ3Q8TDC0 251 aa10.97□□□□□ -0.65
MSH5-206ENST00000423982 FLNAP21333 2647 aaKnown RBP10.96□□□□□ -0.65
MSH5-206ENST00000423982 IGHV7-4-1A0A0J9YVY3 117 aa10.96□□□□□ -0.65
MSH5-206ENST00000423982 CLEC3BP05452 202 aa10.96□□□□□ -0.65
MSH5-206ENST00000423982 CEACAM3P40198 252 aa10.96□□□□□ -0.65
MSH5-206ENST00000423982 LAGE3Q14657 143 aa10.96□□□□□ -0.65
MSH5-206ENST00000423982 ECSCRQ19T08 205 aa10.96□□□□□ -0.65
MSH5-206ENST00000423982 C15orf32Q32M92 178 aa10.96□□□□□ -0.65
MSH5-206ENST00000423982 SFTA2Q6UW10 78 aa10.96□□□□□ -0.65
MSH5-206ENST00000423982 DEFB104AQ8WTQ1 72 aa10.96□□□□□ -0.65
MSH5-206ENST00000423982 SPAG8Q99932 426 aaPredicted RBP10.96□□□□□ -0.65
MSH5-206ENST00000423982 PIMREGQ9BSJ6 248 aa10.96□□□□□ -0.65
MSH5-206ENST00000423982 ACANP16112 2415 aa10.96□□□□□ -0.66
MSH5-206ENST00000423982 GAGE12HA6NDE8 117 aa10.96□□□□□ -0.66
MSH5-206ENST00000423982 BUB3O43684 328 aa10.96□□□□□ -0.66
MSH5-206ENST00000423982 IGF1P05019 195 aa10.96□□□□□ -0.66
MSH5-206ENST00000423982 IGHV7-81A0A0B4J1V7 117 aa10.95□□□□□ -0.66
MSH5-206ENST00000423982 PDZD2O15018 2839 aa10.95□□□□□ -0.66
MSH5-206ENST00000423982 A0A087WX48 190 aa10.95□□□□□ -0.66
MSH5-206ENST00000423982 C10orf105Q8TEF2 133 aa10.95□□□□□ -0.66
MSH5-206ENST00000423982 SIGMAR1Q99720 223 aa10.95□□□□□ -0.66
MSH5-206ENST00000423982 ZFAND3Q9H8U3 227 aa10.95□□□□□ -0.66
MSH5-206ENST00000423982 ODF3BA8MYP8 253 aa10.94□□□□□ -0.66
MSH5-206ENST00000423982 H3BVH4 76 aa10.94□□□□□ -0.66
MSH5-206ENST00000423982 LMO4P61968 165 aa10.94□□□□□ -0.66
MSH5-206ENST00000423982 ATP5G2Q06055 141 aa10.94□□□□□ -0.66
MSH5-206ENST00000423982 PRR9Q5T870 116 aa10.94□□□□□ -0.66
MSH5-206ENST00000423982 CYSLTR1Q9Y271 337 aa10.94□□□□□ -0.66
MSH5-206ENST00000423982 TRAV8-2A0A0B4J237 113 aa10.94□□□□□ -0.66
MSH5-206ENST00000423982 CLPSL1A2RUU4 121 aa10.94□□□□□ -0.66
MSH5-206ENST00000423982 LINC01548A6NM66 108 aa10.94□□□□□ -0.66
MSH5-206ENST00000423982 DEFB1P60022 68 aa10.94□□□□□ -0.66
MSH5-206ENST00000423982 SRSF2Q01130 221 aaKnown RBP10.94□□□□□ -0.66
MSH5-206ENST00000423982 SMPXQ9UHP9 88 aa10.94□□□□□ -0.66
MSH5-206ENST00000423982 SONP18583 2426 aaKnown RBP10.93□□□□□ -0.66
MSH5-206ENST00000423982 CD300EQ496F6 205 aaPredicted RBP10.93□□□□□ -0.66
MSH5-206ENST00000423982 SPANXN1Q5VSR9 72 aa10.93□□□□□ -0.66
MSH5-206ENST00000423982 CLEC19AQ6UXS0 136 aa10.93□□□□□ -0.66
MSH5-206ENST00000423982 VMO1Q7Z5L0 202 aa10.93□□□□□ -0.66
MSH5-206ENST00000423982 G3V318 75 aa10.93□□□□□ -0.66
MSH5-206ENST00000423982 MYO9AB2RTY4 2548 aa10.93□□□□□ -0.66
MSH5-206ENST00000423982 TRBV7-3A0A075B6L6 115 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms