RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 TXNDC17Q9BRA2 123 aa10.99□□□□□ -0.65
COL18A1-205ENST00000423214 MDFICQ9P1T7 246 aa10.99□□□□□ -0.65
COL18A1-205ENST00000423214 LENEPQ9Y5L5 61 aa10.99□□□□□ -0.65
COL18A1-205ENST00000423214 FXYD6-FXYD2A0A087WZ82 144 aa10.98□□□□□ -0.65
COL18A1-205ENST00000423214 K7EP13 123 aa10.98□□□□□ -0.65
COL18A1-205ENST00000423214 PQLC2Q6ZP29 291 aa10.98□□□□□ -0.65
COL18A1-205ENST00000423214 INO80EQ8NBZ0 244 aaPredicted RBP10.98□□□□□ -0.65
COL18A1-205ENST00000423214 CMTM2Q8TAZ6 248 aa10.98□□□□□ -0.65
COL18A1-205ENST00000423214 SH3BGRL3Q9H299 93 aa10.98□□□□□ -0.65
COL18A1-205ENST00000423214 OTORQ9NRC9 128 aa10.98□□□□□ -0.65
COL18A1-205ENST00000423214 MSRB1Q9NZV6 116 aa10.98□□□□□ -0.65
COL18A1-205ENST00000423214 A0A087WTM6 91 aa10.97□□□□□ -0.65
COL18A1-205ENST00000423214 TRAV4A0A0B4J268 109 aa10.97□□□□□ -0.65
COL18A1-205ENST00000423214 ARL14EPLP0DKL9 152 aa10.97□□□□□ -0.65
COL18A1-205ENST00000423214 CDC34P49427 236 aaPredicted RBP10.97□□□□□ -0.65
COL18A1-205ENST00000423214 FAM74A1Q5RGS3 127 aa10.97□□□□□ -0.65
COL18A1-205ENST00000423214 IQCF2Q8IXL9 164 aa10.97□□□□□ -0.65
COL18A1-205ENST00000423214 OR2T35Q8NGX2 323 aa10.97□□□□□ -0.65
COL18A1-205ENST00000423214 RNF222A6NCQ9 220 aa10.96□□□□□ -0.65
COL18A1-205ENST00000423214 GNG5P63218 68 aa10.96□□□□□ -0.65
COL18A1-205ENST00000423214 RPL7L1Q6DKI1 246 aaKnown RBP10.96□□□□□ -0.65
COL18A1-205ENST00000423214 C10orf126Q8N4M7 172 aa10.96□□□□□ -0.65
COL18A1-205ENST00000423214 OR2G3Q8NGZ4 309 aa10.96□□□□□ -0.65
COL18A1-205ENST00000423214 ASB13Q8WXK3 278 aa10.96□□□□□ -0.65
COL18A1-205ENST00000423214 RASL10AQ92737 203 aa10.96□□□□□ -0.65
COL18A1-205ENST00000423214 RAB24Q969Q5 203 aa10.96□□□□□ -0.65
COL18A1-205ENST00000423214 PSMG3Q9BT73 122 aaPredicted RBP10.96□□□□□ -0.65
COL18A1-205ENST00000423214 DMBT1Q9UGM3 2413 aaPredicted RBP10.95□□□□□ -0.66
COL18A1-205ENST00000423214 STAG3L2P0CL84 134 aa10.95□□□□□ -0.66
COL18A1-205ENST00000423214 STAG3L3P0CL85 134 aa10.95□□□□□ -0.66
COL18A1-205ENST00000423214 GOLT1AQ6ZVE7 132 aa10.95□□□□□ -0.66
COL18A1-205ENST00000423214 NHLRC2Q8NBF2 726 aa10.95□□□□□ -0.66
COL18A1-205ENST00000423214 OR4C5Q8NGB2 326 aa10.95□□□□□ -0.66
COL18A1-205ENST00000423214 TMED6Q8WW62 240 aa10.95□□□□□ -0.66
COL18A1-205ENST00000423214 FRZBQ92765 325 aa10.95□□□□□ -0.66
COL18A1-205ENST00000423214 TNFSF18Q9UNG2 199 aa10.95□□□□□ -0.66
COL18A1-205ENST00000423214 TRAV8-1A0A0A6YYK1 113 aa10.94□□□□□ -0.66
COL18A1-205ENST00000423214 G3V3Q6 166 aa10.94□□□□□ -0.66
COL18A1-205ENST00000423214 M0R2P5 195 aa10.94□□□□□ -0.66
COL18A1-205ENST00000423214 CRYGDP07320 174 aa10.94□□□□□ -0.66
COL18A1-205ENST00000423214 PPT1P50897 306 aa10.94□□□□□ -0.66
COL18A1-205ENST00000423214 SERF2P84101 59 aa10.94□□□□□ -0.66
COL18A1-205ENST00000423214 SH2D6Q7Z4S9 175 aa10.94□□□□□ -0.66
COL18A1-205ENST00000423214 SGK494Q96LW2 274 aa10.94□□□□□ -0.66
COL18A1-205ENST00000423214 TRAV21A0A0B4J279 112 aa10.93□□□□□ -0.66
COL18A1-205ENST00000423214 F6UZH7 168 aa10.93□□□□□ -0.66
COL18A1-205ENST00000423214 SMLR1H3BR10 107 aa10.93□□□□□ -0.66
COL18A1-205ENST00000423214 PSCAO43653 123 aa10.93□□□□□ -0.66
COL18A1-205ENST00000423214 MBP02144 154 aa10.93□□□□□ -0.66
COL18A1-205ENST00000423214 INAFM2P0DMQ5 153 aa10.93□□□□□ -0.66
COL18A1-205ENST00000423214 GCHFRP30047 84 aa10.93□□□□□ -0.66
COL18A1-205ENST00000423214 TDRG1Q3Y452 100 aa10.93□□□□□ -0.66
COL18A1-205ENST00000423214 Q5VSD8 79 aa10.93□□□□□ -0.66
COL18A1-205ENST00000423214 SDF2L1Q9HCN8 221 aa10.93□□□□□ -0.66
COL18A1-205ENST00000423214 BORCS7-ASMTA0A0B4J1R7 106 aa10.92□□□□□ -0.66
COL18A1-205ENST00000423214 XGP55808 180 aa10.92□□□□□ -0.66
COL18A1-205ENST00000423214 TVP23CQ96ET8 276 aa10.92□□□□□ -0.66
COL18A1-205ENST00000423214 ACTR3CQ9C0K3 210 aaPredicted RBP10.92□□□□□ -0.66
COL18A1-205ENST00000423214 IGHV3-16A0A0C4DH30 117 aa10.91□□□□□ -0.66
COL18A1-205ENST00000423214 LOC100131303A0A0U1RQF7 123 aa10.91□□□□□ -0.66
COL18A1-205ENST00000423214 ARPC5O15511 151 aa10.91□□□□□ -0.66
COL18A1-205ENST00000423214 TYMSP04818 313 aa10.91□□□□□ -0.66
COL18A1-205ENST00000423214 GCSHP23434 173 aa10.91□□□□□ -0.66
COL18A1-205ENST00000423214 KRTAP10-1P60331 282 aa10.91□□□□□ -0.66
COL18A1-205ENST00000423214 KCNS1Q96KK3 526 aa10.91□□□□□ -0.66
COL18A1-205ENST00000423214 NDFIP1Q9BT67 221 aa10.91□□□□□ -0.66
COL18A1-205ENST00000423214 TREM1Q9NP99 234 aa10.91□□□□□ -0.66
COL18A1-205ENST00000423214 IGHV3-38A0A0C4DH36 116 aa10.9□□□□□ -0.66
COL18A1-205ENST00000423214 GNRH2O43555 120 aa10.9□□□□□ -0.66
COL18A1-205ENST00000423214 CXorf1O96002 111 aa10.9□□□□□ -0.66
COL18A1-205ENST00000423214 SUMO1P63165 101 aaKnown RBP10.9□□□□□ -0.66
COL18A1-205ENST00000423214 SUN5Q8TC36 379 aa10.9□□□□□ -0.66
COL18A1-205ENST00000423214 FBLL1A6NHQ2 334 aaKnown RBP10.89□□□□□ -0.67
COL18A1-205ENST00000423214 GATA1P15976 413 aaPredicted RBP10.89□□□□□ -0.67
COL18A1-205ENST00000423214 ZNF726P1Q15940 193 aa10.89□□□□□ -0.67
COL18A1-205ENST00000423214 ARL6IP6Q8N6S5 226 aa10.89□□□□□ -0.67
COL18A1-205ENST00000423214 IGLV5-52A0A0A0MRZ9 124 aa10.88□□□□□ -0.67
COL18A1-205ENST00000423214 TRAV8-6A0A0B4J262 113 aa10.88□□□□□ -0.67
COL18A1-205ENST00000423214 TCRAP04437 139 aa10.88□□□□□ -0.67
COL18A1-205ENST00000423214 TIRAPP58753 221 aa10.88□□□□□ -0.67
COL18A1-205ENST00000423214 C5orf17Q8NAS9 161 aa10.88□□□□□ -0.67
COL18A1-205ENST00000423214 PRADC1Q9BSG0 188 aa10.88□□□□□ -0.67
COL18A1-205ENST00000423214 Q9HAA7 133 aa10.88□□□□□ -0.67
COL18A1-205ENST00000423214 CYTL1Q9NRR1 136 aa10.88□□□□□ -0.67
COL18A1-205ENST00000423214 TMEM167BQ9NRX6 74 aa10.88□□□□□ -0.67
COL18A1-205ENST00000423214 BOLA1Q9Y3E2 137 aa10.88□□□□□ -0.67
COL18A1-205ENST00000423214 GGTLC3B5MD39 225 aa10.87□□□□□ -0.67
COL18A1-205ENST00000423214 FGF8P55075 233 aaPredicted RBP10.87□□□□□ -0.67
COL18A1-205ENST00000423214 RHOHQ15669 191 aa10.87□□□□□ -0.67
COL18A1-205ENST00000423214 LINC01556Q5JQF7 62 aa10.87□□□□□ -0.67
COL18A1-205ENST00000423214 OR10J3Q5JRS4 329 aa10.87□□□□□ -0.67
COL18A1-205ENST00000423214 NTN5Q8WTR8 489 aaPredicted RBP10.87□□□□□ -0.67
COL18A1-205ENST00000423214 EPDR1Q9UM22 224 aa10.87□□□□□ -0.67
COL18A1-205ENST00000423214 PSG8Q9UQ74 426 aa10.87□□□□□ -0.67
COL18A1-205ENST00000423214 VPS13BQ7Z7G8 4022 aa10.87□□□□□ -0.67
COL18A1-205ENST00000423214 FAT1Q14517 4588 aa10.87□□□□□ -0.67
COL18A1-205ENST00000423214 HERC1Q15751 4861 aa10.86□□□□□ -0.67
COL18A1-205ENST00000423214 CTXND1A0A1B0GTU2 59 aa10.86□□□□□ -0.67
COL18A1-205ENST00000423214 SERTM2A0A1B0GWG4 89 aa10.86□□□□□ -0.67
COL18A1-205ENST00000423214 TAAR5O14804 337 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms