RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 RASL10AQ92737 203 aa14.12□□□□□ -0.15
GTF3A-202ENST00000419181 ZNF471Q9BX82 626 aaPredicted RBP14.12□□□□□ -0.15
GTF3A-202ENST00000419181 GNRH2O43555 120 aa14.11□□□□□ -0.15
GTF3A-202ENST00000419181 IFNA7P01567 189 aa14.11□□□□□ -0.15
GTF3A-202ENST00000419181 TYMSP04818 313 aa14.11□□□□□ -0.15
GTF3A-202ENST00000419181 KCNS1Q96KK3 526 aa14.11□□□□□ -0.15
GTF3A-202ENST00000419181 LINC00479Q96M42 142 aa14.11□□□□□ -0.15
GTF3A-202ENST00000419181 SDF2L1Q9HCN8 221 aa14.11□□□□□ -0.15
GTF3A-202ENST00000419181 HECTD4Q9Y4D8 3996 aa14.1□□□□□ -0.15
GTF3A-202ENST00000419181 UMAD1C9J7I0 102 aa14.1□□□□□ -0.15
GTF3A-202ENST00000419181 PEX7O00628 323 aa14.1□□□□□ -0.15
GTF3A-202ENST00000419181 GCGP01275 180 aa14.1□□□□□ -0.15
GTF3A-202ENST00000419181 IGHV3-53P01767 116 aa14.1□□□□□ -0.15
GTF3A-202ENST00000419181 PFN1P07737 140 aaKnown RBP14.1□□□□□ -0.15
GTF3A-202ENST00000419181 ZFP69Q49AA0 526 aa14.1□□□□□ -0.15
GTF3A-202ENST00000419181 SAPCD1Q5SSQ6 148 aa14.1□□□□□ -0.15
GTF3A-202ENST00000419181 STOML3Q8TAV4 291 aa14.1□□□□□ -0.15
GTF3A-202ENST00000419181 C11orf21Q9P2W6 132 aa14.1□□□□□ -0.15
GTF3A-202ENST00000419181 TRAV34A0A0B4J273 112 aa14.09□□□□□ -0.15
GTF3A-202ENST00000419181 SMUG1Q53HV7 270 aa14.09□□□□□ -0.15
GTF3A-202ENST00000419181 LINC00336Q6ZUF6 198 aa14.09□□□□□ -0.15
GTF3A-202ENST00000419181 TMUB2Q71RG4 321 aa14.09□□□□□ -0.15
GTF3A-202ENST00000419181 HIST1H2BAQ96A08 127 aa14.09□□□□□ -0.15
GTF3A-202ENST00000419181 A0A096LPF7 62 aa14.08□□□□□ -0.16
GTF3A-202ENST00000419181 RTL8CO15255 209 aa14.08□□□□□ -0.16
GTF3A-202ENST00000419181 PPT1P50897 306 aa14.08□□□□□ -0.16
GTF3A-202ENST00000419181 EIF5AP63241 154 aaKnown RBP14.08□□□□□ -0.16
GTF3A-202ENST00000419181 FHL2Q14192 279 aa14.08□□□□□ -0.16
GTF3A-202ENST00000419181 FAM213BQ8TBF2 198 aa14.08□□□□□ -0.16
GTF3A-202ENST00000419181 MBD3L1Q8WWY6 194 aa14.08□□□□□ -0.16
GTF3A-202ENST00000419181 PRO0255Q9UI72 69 aa14.08□□□□□ -0.16
GTF3A-202ENST00000419181 ARL2-SNX15V9GYD0 113 aa14.08□□□□□ -0.16
GTF3A-202ENST00000419181 FAT2Q9NYQ8 4349 aa14.08□□□□□ -0.16
GTF3A-202ENST00000419181 M0R2P5 195 aa14.07□□□□□ -0.16
GTF3A-202ENST00000419181 PFDN1O60925 122 aa14.07□□□□□ -0.16
GTF3A-202ENST00000419181 SLAQ13239 276 aa14.07□□□□□ -0.16
GTF3A-202ENST00000419181 DPPA3Q6W0C5 159 aa14.07□□□□□ -0.16
GTF3A-202ENST00000419181 Q6ZNX1 250 aa14.07□□□□□ -0.16
GTF3A-202ENST00000419181 Q86TA4 180 aa14.07□□□□□ -0.16
GTF3A-202ENST00000419181 TCTE3Q8IZS6 198 aa14.07□□□□□ -0.16
GTF3A-202ENST00000419181 PAX4O43316 350 aa14.06□□□□□ -0.16
GTF3A-202ENST00000419181 SFTA3P0C7M3 94 aa14.06□□□□□ -0.16
GTF3A-202ENST00000419181 TPT1P13693 172 aaKnown RBP14.06□□□□□ -0.16
GTF3A-202ENST00000419181 CRYBA4P53673 196 aa14.06□□□□□ -0.16
GTF3A-202ENST00000419181 ESRGQ1W209 222 aa14.06□□□□□ -0.16
GTF3A-202ENST00000419181 SFT2D1Q8WV19 159 aa14.06□□□□□ -0.16
GTF3A-202ENST00000419181 ZNF479Q96JC4 524 aa14.06□□□□□ -0.16
GTF3A-202ENST00000419181 TCEAL7Q9BRU2 100 aa14.06□□□□□ -0.16
GTF3A-202ENST00000419181 HHLA3Q9XRX5 114 aa14.06□□□□□ -0.16
GTF3A-202ENST00000419181 UPK3BQ9BT76 320 aa14.05□□□□□ -0.16
GTF3A-202ENST00000419181 DNAH17Q9UFH2 4485 aa14.05□□□□□ -0.16
GTF3A-202ENST00000419181 NBDYA0A0U1RRE5 68 aa14.04□□□□□ -0.16
GTF3A-202ENST00000419181 CST9LP1Q5W188 147 aa14.04□□□□□ -0.16
GTF3A-202ENST00000419181 MRPS16Q9Y3D3 137 aaKnown RBP14.04□□□□□ -0.16
GTF3A-202ENST00000419181 ICOSQ9Y6W8 199 aa14.04□□□□□ -0.16
GTF3A-202ENST00000419181 TRAV4A0A0B4J268 109 aa14.03□□□□□ -0.16
GTF3A-202ENST00000419181 TRGV4A0A0C4DH28 118 aa14.03□□□□□ -0.16
GTF3A-202ENST00000419181 PAGE4O60829 102 aa14.03□□□□□ -0.16
GTF3A-202ENST00000419181 LGALSLQ3ZCW2 172 aaPredicted RBP14.03□□□□□ -0.16
GTF3A-202ENST00000419181 FMC1Q96HJ9 113 aa14.03□□□□□ -0.16
GTF3A-202ENST00000419181 C9orf85Q96MD7 179 aa14.03□□□□□ -0.16
GTF3A-202ENST00000419181 A0A1B0GV50 99 aa14.02□□□□□ -0.17
GTF3A-202ENST00000419181 H2AFB1P0C5Y9 115 aa14.02□□□□□ -0.17
GTF3A-202ENST00000419181 C1orf134Q5TEV5 83 aa14.02□□□□□ -0.17
GTF3A-202ENST00000419181 COX8CQ7Z4L0 72 aa14.02□□□□□ -0.17
GTF3A-202ENST00000419181 Q9H8V8 135 aa14.02□□□□□ -0.17
GTF3A-202ENST00000419181 ZFP30Q9Y2G7 519 aa14.02□□□□□ -0.17
GTF3A-202ENST00000419181 IGKV3D-20A0A0C4DH25 116 aa14.01□□□□□ -0.17
GTF3A-202ENST00000419181 TRBV6-1A0A0K0K1D8 114 aa14.01□□□□□ -0.17
GTF3A-202ENST00000419181 PRSS29PA6NIE9 313 aa14.01□□□□□ -0.17
GTF3A-202ENST00000419181 FABP5P3A8MUU1 101 aa14.01□□□□□ -0.17
GTF3A-202ENST00000419181 SOHLH1Q5JUK2 328 aa14.01□□□□□ -0.17
GTF3A-202ENST00000419181 OR4C5Q8NGB2 326 aa14.01□□□□□ -0.17
GTF3A-202ENST00000419181 ZC2HC1AQ96GY0 325 aa14.01□□□□□ -0.17
GTF3A-202ENST00000419181 A0A1B0GVY2 172 aa14□□□□□ -0.17
GTF3A-202ENST00000419181 C1QBP02746 253 aa14□□□□□ -0.17
GTF3A-202ENST00000419181 RNASE3P12724 160 aaKnown RBP14□□□□□ -0.17
GTF3A-202ENST00000419181 UBE2G1P62253 170 aa14□□□□□ -0.17
GTF3A-202ENST00000419181 ZNF876PQ49A33 203 aa14□□□□□ -0.17
GTF3A-202ENST00000419181 C9JCJ5 164 aa13.99□□□□□ -0.17
GTF3A-202ENST00000419181 LTAP01374 205 aa13.99□□□□□ -0.17
GTF3A-202ENST00000419181 CRIP1P50238 77 aa13.99□□□□□ -0.17
GTF3A-202ENST00000419181 MRPL23Q16540 153 aaKnown RBP13.99□□□□□ -0.17
GTF3A-202ENST00000419181 AKR1C3P42330 323 aa13.98□□□□□ -0.17
GTF3A-202ENST00000419181 EIF5AL1Q6IS14 154 aaKnown RBP13.98□□□□□ -0.17
GTF3A-202ENST00000419181 PTH2Q96A98 100 aa13.98□□□□□ -0.17
GTF3A-202ENST00000419181 K7EQD1 137 aa13.97□□□□□ -0.17
GTF3A-202ENST00000419181 ORM1P02763 201 aa13.97□□□□□ -0.17
GTF3A-202ENST00000419181 RAB5CP51148 216 aa13.97□□□□□ -0.17
GTF3A-202ENST00000419181 KRTAP1-5Q9BYS1 174 aa13.97□□□□□ -0.17
GTF3A-202ENST00000419181 TRAV1-1A0A0B4J248 108 aa13.96□□□□□ -0.17
GTF3A-202ENST00000419181 SCO2A0A1W2PP80 73 aa13.96□□□□□ -0.17
GTF3A-202ENST00000419181 PGPEP1LA6NFU8 196 aa13.96□□□□□ -0.17
GTF3A-202ENST00000419181 RS1O15537 224 aa13.96□□□□□ -0.17
GTF3A-202ENST00000419181 SH2D1AO60880 128 aa13.96□□□□□ -0.17
GTF3A-202ENST00000419181 GYPEP15421 78 aa13.96□□□□□ -0.17
GTF3A-202ENST00000419181 GATA1P15976 413 aaPredicted RBP13.96□□□□□ -0.17
GTF3A-202ENST00000419181 TTC32Q5I0X7 151 aa13.96□□□□□ -0.17
GTF3A-202ENST00000419181 ZNF506Q5JVG8 444 aa13.96□□□□□ -0.17
GTF3A-202ENST00000419181 FAM162BQ5T6X4 162 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms