RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 SDF2L1Q9HCN8 221 aa10.81□□□□□ -0.68
ITGB1-204ENST00000417122 PRO0255Q9UI72 69 aa10.81□□□□□ -0.68
ITGB1-204ENST00000417122 HHLA3Q9XRX5 114 aa10.81□□□□□ -0.68
ITGB1-204ENST00000417122 MRPS16Q9Y3D3 137 aaKnown RBP10.81□□□□□ -0.68
ITGB1-204ENST00000417122 IGHV3-16A0A0C4DH30 117 aa10.8□□□□□ -0.68
ITGB1-204ENST00000417122 IGLV2-11P01706 119 aa10.8□□□□□ -0.68
ITGB1-204ENST00000417122 CRYBA4P53673 196 aa10.8□□□□□ -0.68
ITGB1-204ENST00000417122 FLI1Q01543 452 aaPredicted RBP10.8□□□□□ -0.68
ITGB1-204ENST00000417122 PRNTQ86SH4 94 aa10.8□□□□□ -0.68
ITGB1-204ENST00000417122 TMEM75Q8N9X5 138 aa10.8□□□□□ -0.68
ITGB1-204ENST00000417122 ICOSQ9Y6W8 199 aa10.8□□□□□ -0.68
ITGB1-204ENST00000417122 TRGV4A0A0C4DH28 118 aa10.79□□□□□ -0.68
ITGB1-204ENST00000417122 FBLL1A6NHQ2 334 aaKnown RBP10.79□□□□□ -0.68
ITGB1-204ENST00000417122 GCGP01275 180 aa10.79□□□□□ -0.68
ITGB1-204ENST00000417122 SFTA3P0C7M3 94 aa10.79□□□□□ -0.68
ITGB1-204ENST00000417122 ZNF80P51504 273 aaPredicted RBP10.79□□□□□ -0.68
ITGB1-204ENST00000417122 FGF8P55075 233 aaPredicted RBP10.79□□□□□ -0.68
ITGB1-204ENST00000417122 UBE2G2P60604 165 aa10.79□□□□□ -0.68
ITGB1-204ENST00000417122 C6orf223Q8N319 242 aa10.79□□□□□ -0.68
ITGB1-204ENST00000417122 ZNF479Q96JC4 524 aa10.79□□□□□ -0.68
ITGB1-204ENST00000417122 M0R2P5 195 aa10.78□□□□□ -0.68
ITGB1-204ENST00000417122 IFNA7P01567 189 aa10.78□□□□□ -0.68
ITGB1-204ENST00000417122 ZNF345Q14585 488 aa10.78□□□□□ -0.68
ITGB1-204ENST00000417122 ZFP69Q49AA0 526 aa10.78□□□□□ -0.68
ITGB1-204ENST00000417122 SMUG1Q53HV7 270 aa10.78□□□□□ -0.68
ITGB1-204ENST00000417122 KCNRGQ8N5I3 272 aa10.78□□□□□ -0.68
ITGB1-204ENST00000417122 TRAV4A0A0B4J268 109 aa10.77□□□□□ -0.69
ITGB1-204ENST00000417122 MAP1LC3B2A6NCE7 125 aa10.77□□□□□ -0.69
ITGB1-204ENST00000417122 FAM74A7A6NL05 159 aa10.77□□□□□ -0.69
ITGB1-204ENST00000417122 PFN1P07737 140 aaKnown RBP10.77□□□□□ -0.69
ITGB1-204ENST00000417122 MRPL23Q16540 153 aaKnown RBP10.77□□□□□ -0.69
ITGB1-204ENST00000417122 TTC32Q5I0X7 151 aa10.77□□□□□ -0.69
ITGB1-204ENST00000417122 SAPCD1Q5SSQ6 148 aa10.77□□□□□ -0.69
ITGB1-204ENST00000417122 LINC00479Q96M42 142 aa10.77□□□□□ -0.69
ITGB1-204ENST00000417122 NKX6-2Q9C056 277 aaPredicted RBP10.77□□□□□ -0.69
ITGB1-204ENST00000417122 MAP1LC3BQ9GZQ8 125 aa10.77□□□□□ -0.69
ITGB1-204ENST00000417122 C11orf21Q9P2W6 132 aa10.77□□□□□ -0.69
ITGB1-204ENST00000417122 TRAV34A0A0B4J273 112 aa10.76□□□□□ -0.69
ITGB1-204ENST00000417122 HMSDA8MTL9 139 aa10.76□□□□□ -0.69
ITGB1-204ENST00000417122 OR4C5Q8NGB2 326 aa10.76□□□□□ -0.69
ITGB1-204ENST00000417122 OR11H4Q8NGC9 324 aa10.76□□□□□ -0.69
ITGB1-204ENST00000417122 A0A1W2PPQ1 181 aa10.75□□□□□ -0.69
ITGB1-204ENST00000417122 PEX7O00628 323 aa10.75□□□□□ -0.69
ITGB1-204ENST00000417122 PPT1P50897 306 aa10.75□□□□□ -0.69
ITGB1-204ENST00000417122 HIST1H2BAQ96A08 127 aa10.75□□□□□ -0.69
ITGB1-204ENST00000417122 KRTAP1-5Q9BYS1 174 aa10.75□□□□□ -0.69
ITGB1-204ENST00000417122 ARL2-SNX15V9GYD0 113 aa10.75□□□□□ -0.69
ITGB1-204ENST00000417122 A0A0D9SG52 128 aa10.74□□□□□ -0.69
ITGB1-204ENST00000417122 K7EQD1 137 aa10.74□□□□□ -0.69
ITGB1-204ENST00000417122 FHITP49789 147 aa10.74□□□□□ -0.69
ITGB1-204ENST00000417122 TNP2Q05952 138 aa10.74□□□□□ -0.69
ITGB1-204ENST00000417122 LYPD5Q6UWN5 251 aa10.74□□□□□ -0.69
ITGB1-204ENST00000417122 NEGR1Q7Z3B1 354 aa10.74□□□□□ -0.69
ITGB1-204ENST00000417122 STOML3Q8TAV4 291 aa10.74□□□□□ -0.69
ITGB1-204ENST00000417122 PCNPQ8WW12 178 aaKnown RBP10.74□□□□□ -0.69
ITGB1-204ENST00000417122 PKD1P98161 4303 aa10.73□□□□□ -0.69
ITGB1-204ENST00000417122 KANTRA0A1W2PQU2 76 aa10.73□□□□□ -0.69
ITGB1-204ENST00000417122 C9JCJ5 164 aa10.73□□□□□ -0.69
ITGB1-204ENST00000417122 SIVA1O15304 175 aa10.73□□□□□ -0.69
ITGB1-204ENST00000417122 ORM1P02763 201 aa10.73□□□□□ -0.69
ITGB1-204ENST00000417122 SEC11BP0C7V7 166 aa10.73□□□□□ -0.69
ITGB1-204ENST00000417122 GYPEP15421 78 aa10.73□□□□□ -0.69
ITGB1-204ENST00000417122 SRIP30626 198 aa10.73□□□□□ -0.69
ITGB1-204ENST00000417122 ZNF471Q9BX82 626 aaPredicted RBP10.73□□□□□ -0.69
ITGB1-204ENST00000417122 BCL2L11O43521 198 aa10.72□□□□□ -0.69
ITGB1-204ENST00000417122 NXPH4O95158 308 aa10.72□□□□□ -0.69
ITGB1-204ENST00000417122 ZNF876PQ49A33 203 aa10.72□□□□□ -0.69
ITGB1-204ENST00000417122 Q86TA4 180 aa10.72□□□□□ -0.69
ITGB1-204ENST00000417122 C9orf85Q96MD7 179 aa10.72□□□□□ -0.69
ITGB1-204ENST00000417122 FABP5P3A8MUU1 101 aa10.71□□□□□ -0.69
ITGB1-204ENST00000417122 UMAD1C9J7I0 102 aa10.71□□□□□ -0.69
ITGB1-204ENST00000417122 RNASE3P12724 160 aaKnown RBP10.71□□□□□ -0.69
ITGB1-204ENST00000417122 CST9LP1Q5W188 147 aa10.71□□□□□ -0.69
ITGB1-204ENST00000417122 IGKV3D-20A0A0C4DH25 116 aa10.7□□□□□ -0.7
ITGB1-204ENST00000417122 PGPEP1LA6NFU8 196 aa10.7□□□□□ -0.7
ITGB1-204ENST00000417122 RS1O15537 224 aa10.7□□□□□ -0.7
ITGB1-204ENST00000417122 GATA1P15976 413 aaPredicted RBP10.7□□□□□ -0.7
ITGB1-204ENST00000417122 BTF3P20290 206 aaKnown RBP10.7□□□□□ -0.7
ITGB1-204ENST00000417122 UBE2G1P62253 170 aa10.7□□□□□ -0.7
ITGB1-204ENST00000417122 EIF5AP63241 154 aaKnown RBP10.7□□□□□ -0.7
ITGB1-204ENST00000417122 DPPA3Q6W0C5 159 aa10.7□□□□□ -0.7
ITGB1-204ENST00000417122 FAM213BQ8TBF2 198 aa10.7□□□□□ -0.7
ITGB1-204ENST00000417122 SFT2D1Q8WV19 159 aa10.7□□□□□ -0.7
ITGB1-204ENST00000417122 MBD3L1Q8WWY6 194 aa10.7□□□□□ -0.7
ITGB1-204ENST00000417122 FMC1Q96HJ9 113 aa10.7□□□□□ -0.7
ITGB1-204ENST00000417122 TXNDC17Q9BRA2 123 aa10.7□□□□□ -0.7
ITGB1-204ENST00000417122 TCEAL7Q9BRU2 100 aa10.7□□□□□ -0.7
ITGB1-204ENST00000417122 ZFP30Q9Y2G7 519 aa10.7□□□□□ -0.7
ITGB1-204ENST00000417122 LOC100131303A0A0U1RQF7 123 aa10.69□□□□□ -0.7
ITGB1-204ENST00000417122 CIDEAO60543 219 aa10.69□□□□□ -0.7
ITGB1-204ENST00000417122 PAGE4O60829 102 aa10.69□□□□□ -0.7
ITGB1-204ENST00000417122 ZNF506Q5JVG8 444 aa10.69□□□□□ -0.7
ITGB1-204ENST00000417122 CFAP126Q5VTH2 177 aa10.69□□□□□ -0.7
ITGB1-204ENST00000417122 TMUB2Q71RG4 321 aa10.69□□□□□ -0.7
ITGB1-204ENST00000417122 PTH2Q96A98 100 aa10.69□□□□□ -0.7
ITGB1-204ENST00000417122 HERC2O95714 4834 aa10.69□□□□□ -0.7
ITGB1-204ENST00000417122 KIAA1109Q2LD37 5005 aa10.68□□□□□ -0.7
ITGB1-204ENST00000417122 PFDN1O60925 122 aa10.68□□□□□ -0.7
ITGB1-204ENST00000417122 MED14OSP0DP75 135 aa10.68□□□□□ -0.7
ITGB1-204ENST00000417122 S100A4P26447 101 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms