RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 RPH3ALQ9UNE2 315 aa9.97□□□□□ -0.81
RPS28-201ENST00000417088 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
RPS28-201ENST00000417088 TRAV21A0A0B4J279 112 aa9.96□□□□□ -0.82
RPS28-201ENST00000417088 SMR3BP02814 79 aaPredicted RBP9.96□□□□□ -0.82
RPS28-201ENST00000417088 TYMSP04818 313 aa9.96□□□□□ -0.82
RPS28-201ENST00000417088 TIRAPP58753 221 aa9.96□□□□□ -0.82
RPS28-201ENST00000417088 GOLT1AQ6ZVE7 132 aa9.96□□□□□ -0.82
RPS28-201ENST00000417088 SH2D6Q7Z4S9 175 aa9.96□□□□□ -0.82
RPS28-201ENST00000417088 SCGB1C1Q8TD33 95 aa9.96□□□□□ -0.82
RPS28-201ENST00000417088 S100ZQ8WXG8 99 aa9.96□□□□□ -0.82
RPS28-201ENST00000417088 SMIM3Q9BZL3 60 aa9.96□□□□□ -0.82
RPS28-201ENST00000417088 IGHV3-38A0A0C4DH36 116 aa9.95□□□□□ -0.82
RPS28-201ENST00000417088 LRCOL1A6NCL2 159 aa9.95□□□□□ -0.82
RPS28-201ENST00000417088 F6UZH7 168 aa9.95□□□□□ -0.82
RPS28-201ENST00000417088 INMT-MINDY4F8WBC2 141 aa9.95□□□□□ -0.82
RPS28-201ENST00000417088 UPK1BO75841 260 aa9.95□□□□□ -0.82
RPS28-201ENST00000417088 MPC2O95563 127 aa9.95□□□□□ -0.82
RPS28-201ENST00000417088 GATA1P15976 413 aaPredicted RBP9.95□□□□□ -0.82
RPS28-201ENST00000417088 RPL12P30050 165 aaKnown RBP9.95□□□□□ -0.82
RPS28-201ENST00000417088 IFITM3Q01628 133 aa9.95□□□□□ -0.82
RPS28-201ENST00000417088 FAM74A1Q5RGS3 127 aa9.95□□□□□ -0.82
RPS28-201ENST00000417088 ARL6IP6Q8N6S5 226 aa9.95□□□□□ -0.82
RPS28-201ENST00000417088 NHLRC2Q8NBF2 726 aa9.95□□□□□ -0.82
RPS28-201ENST00000417088 TRAV8-1A0A0A6YYK1 113 aa9.94□□□□□ -0.82
RPS28-201ENST00000417088 PPT1P50897 306 aa9.94□□□□□ -0.82
RPS28-201ENST00000417088 WFDC1Q9HC57 220 aa9.94□□□□□ -0.82
RPS28-201ENST00000417088 SDF2L1Q9HCN8 221 aa9.94□□□□□ -0.82
RPS28-201ENST00000417088 TREM1Q9NP99 234 aa9.94□□□□□ -0.82
RPS28-201ENST00000417088 SRRM2Q9UQ35 2752 aaKnown RBP9.93□□□□□ -0.82
RPS28-201ENST00000417088 IGLV5-52A0A0A0MRZ9 124 aa9.93□□□□□ -0.82
RPS28-201ENST00000417088 PSCAO43653 123 aa9.93□□□□□ -0.82
RPS28-201ENST00000417088 GNG5P63218 68 aa9.93□□□□□ -0.82
RPS28-201ENST00000417088 HAMPP81172 84 aa9.93□□□□□ -0.82
RPS28-201ENST00000417088 LINC01556Q5JQF7 62 aa9.93□□□□□ -0.82
RPS28-201ENST00000417088 PQLC2Q6ZP29 291 aa9.93□□□□□ -0.82
RPS28-201ENST00000417088 KCNS1Q96KK3 526 aa9.93□□□□□ -0.82
RPS28-201ENST00000417088 A0A1W2PPV4 95 aa9.92□□□□□ -0.82
RPS28-201ENST00000417088 IBA57-AS1B1ANH7 110 aa9.92□□□□□ -0.82
RPS28-201ENST00000417088 PFN1P07737 140 aaKnown RBP9.92□□□□□ -0.82
RPS28-201ENST00000417088 PET100P0DJ07 73 aa9.92□□□□□ -0.82
RPS28-201ENST00000417088 RAB2AP61019 212 aa9.92□□□□□ -0.82
RPS28-201ENST00000417088 ACOT6Q3I5F7 207 aaPredicted RBP9.92□□□□□ -0.82
RPS28-201ENST00000417088 SLC25A29Q8N8R3 303 aa9.92□□□□□ -0.82
RPS28-201ENST00000417088 ASB13Q8WXK3 278 aa9.92□□□□□ -0.82
RPS28-201ENST00000417088 MARVELD1Q9BSK0 173 aa9.92□□□□□ -0.82
RPS28-201ENST00000417088 DNAH8Q96JB1 4490 aa9.92□□□□□ -0.82
RPS28-201ENST00000417088 FBLL1A6NHQ2 334 aaKnown RBP9.91□□□□□ -0.82
RPS28-201ENST00000417088 RS1O15537 224 aa9.91□□□□□ -0.82
RPS28-201ENST00000417088 SSNA1O43805 119 aa9.91□□□□□ -0.82
RPS28-201ENST00000417088 ZNF876PQ49A33 203 aa9.91□□□□□ -0.82
RPS28-201ENST00000417088 DPPA3Q6W0C5 159 aa9.91□□□□□ -0.82
RPS28-201ENST00000417088 NTN5Q8WTR8 489 aaPredicted RBP9.91□□□□□ -0.82
RPS28-201ENST00000417088 SGK494Q96LW2 274 aa9.91□□□□□ -0.82
RPS28-201ENST00000417088 TMEM70Q9BUB7 260 aa9.91□□□□□ -0.82
RPS28-201ENST00000417088 C11orf21Q9P2W6 132 aa9.91□□□□□ -0.82
RPS28-201ENST00000417088 TRAV8-6A0A0B4J262 113 aa9.9□□□□□ -0.82
RPS28-201ENST00000417088 TRBV6-4A0A1B0GX49 114 aa9.9□□□□□ -0.82
RPS28-201ENST00000417088 FAM229AH3BQW9 127 aa9.9□□□□□ -0.82
RPS28-201ENST00000417088 HMGB3O15347 200 aaKnown RBP9.9□□□□□ -0.82
RPS28-201ENST00000417088 ZNF80P51504 273 aaPredicted RBP9.9□□□□□ -0.82
RPS28-201ENST00000417088 CFAP126Q5VTH2 177 aa9.9□□□□□ -0.82
RPS28-201ENST00000417088 Q8N814 137 aa9.9□□□□□ -0.82
RPS28-201ENST00000417088 PRADC1Q9BSG0 188 aa9.9□□□□□ -0.82
RPS28-201ENST00000417088 Q9HAA7 133 aa9.9□□□□□ -0.82
RPS28-201ENST00000417088 IGHV3-73A0A0B4J1V6 119 aa9.89□□□□□ -0.83
RPS28-201ENST00000417088 CIDEAO60543 219 aa9.89□□□□□ -0.83
RPS28-201ENST00000417088 RHOHQ15669 191 aa9.89□□□□□ -0.83
RPS28-201ENST00000417088 OR10J3Q5JRS4 329 aa9.89□□□□□ -0.83
RPS28-201ENST00000417088 OR10G9Q8NGN4 311 aa9.89□□□□□ -0.83
RPS28-201ENST00000417088 OR10G7Q8NGN6 311 aa9.89□□□□□ -0.83
RPS28-201ENST00000417088 NDFIP1Q9BT67 221 aa9.89□□□□□ -0.83
RPS28-201ENST00000417088 BOLA1Q9Y3E2 137 aa9.89□□□□□ -0.83
RPS28-201ENST00000417088 SERTM2A0A1B0GWG4 89 aa9.88□□□□□ -0.83
RPS28-201ENST00000417088 IGHV3-30P01768 117 aa9.88□□□□□ -0.83
RPS28-201ENST00000417088 IGHV3-33P01772 117 aa9.88□□□□□ -0.83
RPS28-201ENST00000417088 ARL14EPLP0DKL9 152 aa9.88□□□□□ -0.83
RPS28-201ENST00000417088 IGHV3-30-3P0DP02 117 aa9.88□□□□□ -0.83
RPS28-201ENST00000417088 IGHV3-30-5P0DP03 117 aa9.88□□□□□ -0.83
RPS28-201ENST00000417088 LELP1Q5T871 98 aa9.88□□□□□ -0.83
RPS28-201ENST00000417088 C9orf85Q96MD7 179 aa9.88□□□□□ -0.83
RPS28-201ENST00000417088 FAM30AQ9NZY2 134 aa9.88□□□□□ -0.83
RPS28-201ENST00000417088 PGPEP1LA6NFU8 196 aa9.87□□□□□ -0.83
RPS28-201ENST00000417088 TAAR5O14804 337 aa9.87□□□□□ -0.83
RPS28-201ENST00000417088 TCRAP04437 139 aa9.87□□□□□ -0.83
RPS28-201ENST00000417088 TMEM75Q8N9X5 138 aa9.87□□□□□ -0.83
RPS28-201ENST00000417088 C5orf17Q8NAS9 161 aa9.87□□□□□ -0.83
RPS28-201ENST00000417088 ATP6V0E2Q8NHE4 81 aa9.87□□□□□ -0.83
RPS28-201ENST00000417088 PTH2Q96A98 100 aa9.87□□□□□ -0.83
RPS28-201ENST00000417088 PSG8Q9UQ74 426 aa9.87□□□□□ -0.83
RPS28-201ENST00000417088 GCGP01275 180 aa9.86□□□□□ -0.83
RPS28-201ENST00000417088 IGLV2-11P01706 119 aa9.86□□□□□ -0.83
RPS28-201ENST00000417088 STAG3L2P0CL84 134 aa9.86□□□□□ -0.83
RPS28-201ENST00000417088 STAG3L3P0CL85 134 aa9.86□□□□□ -0.83
RPS28-201ENST00000417088 CDC34P49427 236 aaPredicted RBP9.86□□□□□ -0.83
RPS28-201ENST00000417088 ZNF506Q5JVG8 444 aa9.86□□□□□ -0.83
RPS28-201ENST00000417088 Q6ZSN1 163 aa9.86□□□□□ -0.83
RPS28-201ENST00000417088 SUN5Q8TC36 379 aa9.86□□□□□ -0.83
RPS28-201ENST00000417088 GTSF1LQ9H1H1 148 aa9.86□□□□□ -0.83
RPS28-201ENST00000417088 MGST1P10620 155 aaKnown RBP9.85□□□□□ -0.83
RPS28-201ENST00000417088 RNASE3P12724 160 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms