RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 SDF2L1Q9HCN8 221 aa17.18■□□□□ 0.34
HLA-C-204ENST00000415537 TMEM167BQ9NRX6 74 aa17.18■□□□□ 0.34
HLA-C-204ENST00000415537 TNFSF18Q9UNG2 199 aa17.18■□□□□ 0.34
HLA-C-204ENST00000415537 FXYD6-FXYD2A0A087WZ82 144 aa17.17■□□□□ 0.34
HLA-C-204ENST00000415537 BORCS7-ASMTA0A0B4J1R7 106 aa17.17■□□□□ 0.34
HLA-C-204ENST00000415537 NEGR1Q7Z3B1 354 aa17.17■□□□□ 0.34
HLA-C-204ENST00000415537 SUN5Q8TC36 379 aa17.17■□□□□ 0.34
HLA-C-204ENST00000415537 KRTAP17-1Q9BYP8 105 aa17.17■□□□□ 0.34
HLA-C-204ENST00000415537 M0R2P5 195 aa17.16■□□□□ 0.34
HLA-C-204ENST00000415537 TCRAP04437 139 aa17.16■□□□□ 0.34
HLA-C-204ENST00000415537 PCNPQ8WW12 178 aaKnown RBP17.16■□□□□ 0.34
HLA-C-204ENST00000415537 TRAV4A0A0B4J268 109 aa17.15■□□□□ 0.34
HLA-C-204ENST00000415537 IGHV3-16A0A0C4DH30 117 aa17.15■□□□□ 0.34
HLA-C-204ENST00000415537 NXPH4O95158 308 aa17.15■□□□□ 0.34
HLA-C-204ENST00000415537 TYMSP04818 313 aa17.15■□□□□ 0.34
HLA-C-204ENST00000415537 SRIP30626 198 aa17.15■□□□□ 0.34
HLA-C-204ENST00000415537 SUMO1P63165 101 aaKnown RBP17.15■□□□□ 0.34
HLA-C-204ENST00000415537 LYPD5Q6UWN5 251 aa17.15■□□□□ 0.34
HLA-C-204ENST00000415537 OR4C5Q8NGB2 326 aa17.15■□□□□ 0.34
HLA-C-204ENST00000415537 RPL7L1Q6DKI1 246 aaKnown RBP17.14■□□□□ 0.33
HLA-C-204ENST00000415537 RNF222A6NCQ9 220 aa17.13■□□□□ 0.33
HLA-C-204ENST00000415537 K7EQD1 137 aa17.13■□□□□ 0.33
HLA-C-204ENST00000415537 ORM1P02763 201 aa17.13■□□□□ 0.33
HLA-C-204ENST00000415537 ZFP69Q49AA0 526 aa17.13■□□□□ 0.33
HLA-C-204ENST00000415537 OR2T35Q8NGX2 323 aa17.13■□□□□ 0.33
HLA-C-204ENST00000415537 EPDR1Q9UM22 224 aa17.13■□□□□ 0.33
HLA-C-204ENST00000415537 PSG8Q9UQ74 426 aa17.13■□□□□ 0.33
HLA-C-204ENST00000415537 GYPEP15421 78 aa17.12■□□□□ 0.33
HLA-C-204ENST00000415537 C9JCJ5 164 aa17.11■□□□□ 0.33
HLA-C-204ENST00000415537 TAAR5O14804 337 aa17.11■□□□□ 0.33
HLA-C-204ENST00000415537 LINC00315P59091 139 aa17.11■□□□□ 0.33
HLA-C-204ENST00000415537 CYB561D1Q8N8Q1 229 aa17.11■□□□□ 0.33
HLA-C-204ENST00000415537 GGTLC3B5MD39 225 aa17.1■□□□□ 0.33
HLA-C-204ENST00000415537 GCGP01275 180 aa17.1■□□□□ 0.33
HLA-C-204ENST00000415537 FLI1Q01543 452 aaPredicted RBP17.1■□□□□ 0.33
HLA-C-204ENST00000415537 RGS21Q2M5E4 152 aa17.1■□□□□ 0.33
HLA-C-204ENST00000415537 SMUG1Q53HV7 270 aa17.1■□□□□ 0.33
HLA-C-204ENST00000415537 SPATA12Q7Z6I5 190 aa17.1■□□□□ 0.33
HLA-C-204ENST00000415537 PRNTQ86SH4 94 aa17.1■□□□□ 0.33
HLA-C-204ENST00000415537 TXNDC17Q9BRA2 123 aa17.1■□□□□ 0.33
HLA-C-204ENST00000415537 A0A1W2PRE2 83 aa17.09■□□□□ 0.33
HLA-C-204ENST00000415537 FBLL1A6NHQ2 334 aaKnown RBP17.09■□□□□ 0.33
HLA-C-204ENST00000415537 TMEM75Q8N9X5 138 aa17.09■□□□□ 0.33
HLA-C-204ENST00000415537 TRAV9-2A0A087WT02 112 aa17.08■□□□□ 0.32
HLA-C-204ENST00000415537 CTXND1A0A1B0GTU2 59 aa17.08■□□□□ 0.32
HLA-C-204ENST00000415537 PFN1P07737 140 aaKnown RBP17.08■□□□□ 0.32
HLA-C-204ENST00000415537 ZNF80P51504 273 aaPredicted RBP17.08■□□□□ 0.32
HLA-C-204ENST00000415537 SAPCD1Q5SSQ6 148 aa17.08■□□□□ 0.32
HLA-C-204ENST00000415537 IGLV2-11P01706 119 aa17.07■□□□□ 0.32
HLA-C-204ENST00000415537 AKR1C8PQ5T2L2 129 aa17.07■□□□□ 0.32
HLA-C-204ENST00000415537 LY96Q9Y6Y9 160 aa17.07■□□□□ 0.32
HLA-C-204ENST00000415537 IFNA7P01567 189 aa17.06■□□□□ 0.32
HLA-C-204ENST00000415537 ZNF876PQ49A33 203 aa17.06■□□□□ 0.32
HLA-C-204ENST00000415537 ZNF726P1Q15940 193 aa17.05■□□□□ 0.32
HLA-C-204ENST00000415537 SH2D6Q7Z4S9 175 aa17.05■□□□□ 0.32
HLA-C-204ENST00000415537 C11orf21Q9P2W6 132 aa17.05■□□□□ 0.32
HLA-C-204ENST00000415537 PPT1P50897 306 aa17.04■□□□□ 0.32
HLA-C-204ENST00000415537 UBE2G2P60604 165 aa17.04■□□□□ 0.32
HLA-C-204ENST00000415537 NHLRC2Q8NBF2 726 aa17.04■□□□□ 0.32
HLA-C-204ENST00000415537 ARPC5O15511 151 aa17.03■□□□□ 0.32
HLA-C-204ENST00000415537 CIDEAO60543 219 aa17.03■□□□□ 0.32
HLA-C-204ENST00000415537 GATA1P15976 413 aaPredicted RBP17.03■□□□□ 0.32
HLA-C-204ENST00000415537 NKX6-2Q9C056 277 aaPredicted RBP17.03■□□□□ 0.32
HLA-C-204ENST00000415537 TRAV34A0A0B4J273 112 aa17.02■□□□□ 0.32
HLA-C-204ENST00000415537 LOC100131303A0A0U1RQF7 123 aa17.02■□□□□ 0.32
HLA-C-204ENST00000415537 CDK2AP2O75956 126 aa17.02■□□□□ 0.32
HLA-C-204ENST00000415537 EVI2AP22794 236 aa17.02■□□□□ 0.32
HLA-C-204ENST00000415537 FGF8P55075 233 aaPredicted RBP17.02■□□□□ 0.32
HLA-C-204ENST00000415537 Q6ZRN7 208 aaPredicted RBP17.02■□□□□ 0.32
HLA-C-204ENST00000415537 NFE4Q86UQ8 179 aa17.02■□□□□ 0.32
HLA-C-204ENST00000415537 LINC00479Q96M42 142 aa17.02■□□□□ 0.32
HLA-C-204ENST00000415537 PCLOQ9Y6V0 5065 aa17.02■□□□□ 0.31
HLA-C-204ENST00000415537 K7EP13 123 aa17.01■□□□□ 0.31
HLA-C-204ENST00000415537 WFDC10BQ8IUB3 73 aa17.01■□□□□ 0.31
HLA-C-204ENST00000415537 C9orf85Q96MD7 179 aa17.01■□□□□ 0.31
HLA-C-204ENST00000415537 PRADC1Q9BSG0 188 aa17.01■□□□□ 0.31
HLA-C-204ENST00000415537 ARL2-SNX15V9GYD0 113 aa17.01■□□□□ 0.31
HLA-C-204ENST00000415537 G3V3Q6 166 aa17■□□□□ 0.31
HLA-C-204ENST00000415537 PEX7O00628 323 aa17■□□□□ 0.31
HLA-C-204ENST00000415537 EREGO14944 169 aa17■□□□□ 0.31
HLA-C-204ENST00000415537 RS1O15537 224 aa17■□□□□ 0.31
HLA-C-204ENST00000415537 KRTAP10-2P60368 255 aa17■□□□□ 0.31
HLA-C-204ENST00000415537 CFAP126Q5VTH2 177 aa17■□□□□ 0.31
HLA-C-204ENST00000415537 TNFRSF18Q9Y5U5 241 aa17■□□□□ 0.31
HLA-C-204ENST00000415537 FAM74A7A6NL05 159 aa16.99■□□□□ 0.31
HLA-C-204ENST00000415537 FABP5P3A8MUU1 101 aa16.99■□□□□ 0.31
HLA-C-204ENST00000415537 S100A4P26447 101 aaKnown RBP16.99■□□□□ 0.31
HLA-C-204ENST00000415537 SLC25A29Q8N8R3 303 aa16.99■□□□□ 0.31
HLA-C-204ENST00000415537 HIST1H2BAQ96A08 127 aa16.99■□□□□ 0.31
HLA-C-204ENST00000415537 IGHV3-73A0A0B4J1V6 119 aa16.98■□□□□ 0.31
HLA-C-204ENST00000415537 MAP1LC3B2A6NCE7 125 aa16.98■□□□□ 0.31
HLA-C-204ENST00000415537 PGPEP1LA6NFU8 196 aa16.98■□□□□ 0.31
HLA-C-204ENST00000415537 ERVFC1-1P60608 527 aa16.98■□□□□ 0.31
HLA-C-204ENST00000415537 ZNF506Q5JVG8 444 aa16.98■□□□□ 0.31
HLA-C-204ENST00000415537 DPPA3Q6W0C5 159 aa16.98■□□□□ 0.31
HLA-C-204ENST00000415537 PTH2Q96A98 100 aa16.98■□□□□ 0.31
HLA-C-204ENST00000415537 MAP1LC3BQ9GZQ8 125 aa16.98■□□□□ 0.31
HLA-C-204ENST00000415537 CYTL1Q9NRR1 136 aa16.98■□□□□ 0.31
HLA-C-204ENST00000415537 RYR1P21817 5038 aa16.98■□□□□ 0.31
HLA-C-204ENST00000415537 TRBV6-4A0A1B0GX49 114 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms