RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TTC32Q5I0X7 151 aa4.48□□□□□ -1.69
USP54-202ENST00000413442 Q6ZNX1 250 aa4.48□□□□□ -1.69
USP54-202ENST00000413442 ZNF471Q9BX82 626 aaPredicted RBP4.48□□□□□ -1.69
USP54-202ENST00000413442 MAP1LC3BQ9GZQ8 125 aa4.48□□□□□ -1.69
USP54-202ENST00000413442 TRAV9-2A0A087WT02 112 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 TRAV26-1A0A087WT03 109 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 TRAV4A0A0B4J268 109 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 GGTLC3B5MD39 225 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 PAX4O43316 350 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 NUDT3O95989 172 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 IGLV2-11P01706 119 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 PRM2P04554 102 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 TIRAPP58753 221 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 UBE2G1P62253 170 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 ZNF726P1Q15940 193 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 TMEM183BQ1AE95 376 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 Q6ZTI0 123 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 TMUB2Q71RG4 321 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 SLC51BQ86UW2 128 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 SFT2D1Q8WV19 159 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 SMIM12Q96EX1 92 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 MANBALQ9NQG1 85 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 ICOSQ9Y6W8 199 aa4.47□□□□□ -1.69
USP54-202ENST00000413442 DYNC2H1Q8NCM8 4307 aaKnown RBP4.47□□□□□ -1.69
USP54-202ENST00000413442 TRGV4A0A0C4DH28 118 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 IGHV3-16A0A0C4DH30 117 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 TRBV6-4A0A1B0GX49 114 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 A8MWV9 139 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 C9JCJ5 164 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 PEX7O00628 323 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 NDUFS6O75380 124 aaKnown RBP4.46□□□□□ -1.7
USP54-202ENST00000413442 GCGP01275 180 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 CXCL1P09341 107 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 CRYBA4P53673 196 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 FHL2Q14192 279 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 ZFP2Q6ZN57 461 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 Q6ZR54 194 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 NEGR1Q7Z3B1 354 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 PRNTQ86SH4 94 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 TMEM183AQ8IXX5 376 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 OR4C5Q8NGB2 326 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 OR11H4Q8NGC9 324 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 Q8TAT8 98 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 TVP23CQ96ET8 276 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 Q9H8V8 135 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 BIN3Q9NQY0 253 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 IL36BQ9NZH7 164 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 MDFICQ9P1T7 246 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 RPH3ALQ9UNE2 315 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 MRPS16Q9Y3D3 137 aaKnown RBP4.46□□□□□ -1.7
USP54-202ENST00000413442 MUC4Q99102 2169 aa4.46□□□□□ -1.7
USP54-202ENST00000413442 TRAV8-1A0A0A6YYK1 113 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 NBDYA0A0U1RRE5 68 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 GNRH2O43555 120 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 LTAP01374 205 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 IFNA1P01562 189 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 MED14OSP0DP75 135 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 MGST1P10620 155 aaKnown RBP4.45□□□□□ -1.7
USP54-202ENST00000413442 HOXA5P20719 270 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 S100A4P26447 101 aaKnown RBP4.45□□□□□ -1.7
USP54-202ENST00000413442 SULT1A2P50226 295 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 ZNF876PQ49A33 203 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 MUC21Q5SSG8 566 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 FAM162BQ5T6X4 162 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 PRR9Q5T870 116 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 C1orf134Q5TEV5 83 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 CST9LP1Q5W188 147 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 SSX7Q7RTT5 188 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 SYT8Q8NBV8 401 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 ZNRF2Q8NHG8 242 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 FAM213BQ8TBF2 198 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 PCNPQ8WW12 178 aaKnown RBP4.45□□□□□ -1.7
USP54-202ENST00000413442 VSIG2Q96IQ7 327 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 C9orf85Q96MD7 179 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 PRADC1Q9BSG0 188 aa4.45□□□□□ -1.7
USP54-202ENST00000413442 RYR2Q92736 4967 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 RYR3Q15413 4870 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 A0A096LPF7 62 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 RHODO00212 210 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 RS1O15537 224 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 PDE6DO43924 150 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 PAGE4O60829 102 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 TYMSP04818 313 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 ASIPP42127 132 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 FGF8P55075 233 aaPredicted RBP4.44□□□□□ -1.7
USP54-202ENST00000413442 UBE2G2P60604 165 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 GNG5P63218 68 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 BLOC1S1P78537 153 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 ESRGQ1W209 222 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 ZNF674Q2M3X9 581 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 AKAP14Q86UN6 197 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 NFE4Q86UQ8 179 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 LINC00588Q9Y4M8 146 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 NACAE9PAV3 2078 aa4.44□□□□□ -1.7
USP54-202ENST00000413442 DNAH1Q9P2D7 4330 aa4.43□□□□□ -1.7
USP54-202ENST00000413442 XKRY2A2RUG3 117 aa4.43□□□□□ -1.7
USP54-202ENST00000413442 B4DEV8 164 aa4.43□□□□□ -1.7
USP54-202ENST00000413442 KRBOX1C9JBD0 128 aa4.43□□□□□ -1.7
USP54-202ENST00000413442 SRIP30626 198 aa4.43□□□□□ -1.7
USP54-202ENST00000413442 AKR1C3P42330 323 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms