RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PDE6HQ13956 83 aa8.96□□□□□ -0.98
PRPF40A-202ENST00000410080 BOD1L2Q8IYS8 172 aa8.96□□□□□ -0.98
PRPF40A-202ENST00000410080 MRPL53Q96EL3 112 aaKnown RBP8.96□□□□□ -0.98
PRPF40A-202ENST00000410080 PNRC2Q9NPJ4 139 aaKnown RBP8.96□□□□□ -0.98
PRPF40A-202ENST00000410080 C5orf38Q86SI9 138 aa8.96□□□□□ -0.98
PRPF40A-202ENST00000410080 PTPN13Q12923 2485 aa8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 GPHB5Q86YW7 130 aa8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 MRPL36Q9P0J6 103 aaKnown RBP8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 Q86TA4 180 aa8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 SPATA25Q9BR10 227 aa8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 FUSP35637 526 aaKnown RBP eCLIP8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 IGFBPL1Q8WX77 278 aa8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 RNF183Q96D59 192 aa8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 LRP4O75096 1905 aa8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 IL17DQ8TAD2 202 aa8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 ORMDL1Q9P0S3 153 aa8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 ZFP36P26651 326 aaKnown RBP8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 CARHSP1Q9Y2V2 147 aaKnown RBP8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 ASPHD1Q5U4P2 390 aa8.95□□□□□ -0.98
PRPF40A-202ENST00000410080 H0Y9J4 135 aa8.94□□□□□ -0.98
PRPF40A-202ENST00000410080 A0A1B0GW64 132 aa8.94□□□□□ -0.98
PRPF40A-202ENST00000410080 WDR83OSQ9Y284 106 aa8.94□□□□□ -0.98
PRPF40A-202ENST00000410080 B3GALT5-AS1P59052 145 aa8.94□□□□□ -0.98
PRPF40A-202ENST00000410080 CXCL1P09341 107 aa8.94□□□□□ -0.98
PRPF40A-202ENST00000410080 SVIPQ8NHG7 77 aa8.94□□□□□ -0.98
PRPF40A-202ENST00000410080 TECTAO75443 2155 aa8.94□□□□□ -0.98
PRPF40A-202ENST00000410080 IGHV7-4-1A0A0J9YVY3 117 aa8.94□□□□□ -0.98
PRPF40A-202ENST00000410080 MRPL27Q9P0M9 148 aaKnown RBP8.94□□□□□ -0.98
PRPF40A-202ENST00000410080 RBM3P98179 157 aaKnown RBP8.94□□□□□ -0.98
PRPF40A-202ENST00000410080 ATRAIDQ6UW56 229 aa8.93□□□□□ -0.98
PRPF40A-202ENST00000410080 PRSS33Q8NF86 280 aa8.93□□□□□ -0.98
PRPF40A-202ENST00000410080 PTPRSQ13332 1948 aa8.93□□□□□ -0.98
PRPF40A-202ENST00000410080 IGHG2P01859 326 aa8.93□□□□□ -0.98
PRPF40A-202ENST00000410080 LY6G6FQ5SQ64 297 aa8.93□□□□□ -0.98
PRPF40A-202ENST00000410080 H0YIZ8 118 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 COX7B2Q8TF08 81 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 NDUFA12Q9UI09 145 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 NCR3O14931 201 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 C2orf66Q6UXQ4 117 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 FAM208BQ5VWN6 2430 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 IGHV4OR15-8A0A075B7B6 117 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 A0A087WW49 117 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 NPBQ8NG41 125 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 ALPK3Q96L96 1907 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 GNRH2O43555 120 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 LINC01551Q86U37 167 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 HIST1H2BLQ99880 126 aa8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 MRPL23Q16540 153 aaKnown RBP8.92□□□□□ -0.98
PRPF40A-202ENST00000410080 C15orf62A8K5M9 175 aa8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 DEFB135Q30KP9 77 aa8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 AMTNQ6UX39 209 aa8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 C16orf74Q96GX8 76 aa8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 IGKV4-1P06312 121 aa8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 WFDC11Q8NEX6 87 aa8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 F6UB75 175 aa8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 MRPL51Q4U2R6 128 aaKnown RBP8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 COX7A2LO14548 114 aa8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 FGF16O43320 207 aa8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 ANKRD39Q53RE8 183 aa8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 HHLA3Q9XRX5 114 aa8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 TPSG1Q9NRR2 321 aa8.91□□□□□ -0.98
PRPF40A-202ENST00000410080 ARTNQ5T4W7 220 aa8.9□□□□□ -0.98
PRPF40A-202ENST00000410080 WDR86Q86TI4 376 aa8.9□□□□□ -0.98
PRPF40A-202ENST00000410080 PRSS46E5RG02 174 aa8.9□□□□□ -0.98
PRPF40A-202ENST00000410080 FOXI2Q6ZQN5 318 aa8.9□□□□□ -0.98
PRPF40A-202ENST00000410080 TRAV4A0A0B4J268 109 aa8.9□□□□□ -0.98
PRPF40A-202ENST00000410080 UBE2CO00762 179 aa8.9□□□□□ -0.98
PRPF40A-202ENST00000410080 CPAMD8Q8IZJ3 1885 aa8.9□□□□□ -0.99
PRPF40A-202ENST00000410080 ZNF833PQ6ZTB9 187 aa8.9□□□□□ -0.99
PRPF40A-202ENST00000410080 C17orf82Q86X59 251 aaPredicted RBP8.9□□□□□ -0.99
PRPF40A-202ENST00000410080 IGHV4-38-2P0DP08 117 aa8.89□□□□□ -0.99
PRPF40A-202ENST00000410080 Q8NFD4 153 aa8.89□□□□□ -0.99
PRPF40A-202ENST00000410080 FAM104BQ5XKR9 115 aa8.89□□□□□ -0.99
PRPF40A-202ENST00000410080 IGHV2-5P01817 119 aa8.89□□□□□ -0.99
PRPF40A-202ENST00000410080 NDUFS7O75251 213 aa8.89□□□□□ -0.99
PRPF40A-202ENST00000410080 CASC2Q6XLA1 102 aa8.89□□□□□ -0.99
PRPF40A-202ENST00000410080 Q6ZWC4 215 aa8.89□□□□□ -0.99
PRPF40A-202ENST00000410080 IGHV4-30-2A0A087WSY4 118 aa8.89□□□□□ -0.99
PRPF40A-202ENST00000410080 ETV2O00321 342 aaPredicted RBP8.89□□□□□ -0.99
PRPF40A-202ENST00000410080 ELANEP08246 267 aa8.89□□□□□ -0.99
PRPF40A-202ENST00000410080 GRNP28799 593 aaKnown RBP8.89□□□□□ -0.99
PRPF40A-202ENST00000410080 MUC6Q6W4X9 2439 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 CARD19Q96LW7 228 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 GFRA4Q9GZZ7 299 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 NMSQ5H8A3 153 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 SLC25A29Q8N8R3 303 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 K7EQD1 137 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 Q8N8P6 123 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 OR11H6Q8NGC7 330 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 SMAD5-AS1Q9Y6J3 95 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 FOXE3Q13461 319 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 C1orf194Q5T5A4 169 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 HIST2H2BCQ6DN03 193 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 Q9H8V8 135 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 PROP1O75360 226 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 IFITM1P13164 125 aa8.88□□□□□ -0.99
PRPF40A-202ENST00000410080 TEX22C9J3V5 150 aa8.87□□□□□ -0.99
PRPF40A-202ENST00000410080 ZC2HC1AQ96GY0 325 aa8.87□□□□□ -0.99
PRPF40A-202ENST00000410080 NDUFA4L2Q9NRX3 87 aa8.87□□□□□ -0.99
PRPF40A-202ENST00000410080 SONP18583 2426 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms