RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 MYO5AQ9Y4I1 1855 aaKnown RBP2.46□□□□□ -2.02
LSM5-205ENST00000409952 TNS1Q9HBL0 1735 aaKnown RBP2.46□□□□□ -2.02
LSM5-205ENST00000409952 MYOM3Q5VTT5 1437 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 UACAQ9BZF9 1416 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 GOLGB1Q14789 3259 aaKnown RBP2.46□□□□□ -2.02
LSM5-205ENST00000409952 LOC107984156A0A0G2JMH3 177 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 IFITM5A6NNB3 132 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 ZNF736B4DX44 427 aaPredicted RBP2.46□□□□□ -2.02
LSM5-205ENST00000409952 CD2P06729 351 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 AKAIN1P0CW23 69 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 MEIG1Q5JSS6 88 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 C1orf137Q5JT78 98 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 ZNF833PQ6ZTB9 187 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 ARL17AQ8IVW1 177 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 KCNRGQ8N5I3 272 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 Q8TAT8 98 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 ZNF431Q8TF32 576 aaPredicted RBP2.46□□□□□ -2.02
LSM5-205ENST00000409952 C4orf3Q8WVX3 66 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 SMIM7Q9BQ49 75 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 TXNDC17Q9BRA2 123 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 PSMG3Q9BT73 122 aaPredicted RBP2.46□□□□□ -2.02
LSM5-205ENST00000409952 SCN3BQ9NY72 215 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 PTPRBP23467 1997 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 SHROOM3Q8TF72 1996 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 RREB1Q92766 1687 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.46□□□□□ -2.02
LSM5-205ENST00000409952 TULP4Q9NRJ4 1543 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 LAMB4A4D0S4 1761 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 CCDC88CQ9P219 2028 aa2.46□□□□□ -2.02
LSM5-205ENST00000409952 CCDC88BA6NC98 1476 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 ATP10BO94823 1461 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 KIAA2026Q5HYC2 2103 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 CNBPP62633 177 aaKnown RBP2.45□□□□□ -2.02
LSM5-205ENST00000409952 LINC01545Q5VT33 79 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 KRTAP26-1Q6PEX3 210 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 CASC2Q6XLA1 102 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 ATP11AUNQ6ZP68 121 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 ATP6V0E2Q8NHE4 81 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 PP6455Q8WZ26 134 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 C14orf144Q96I85 54 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 SNRNP25Q9BV90 132 aaKnown RBP2.45□□□□□ -2.02
LSM5-205ENST00000409952 DISP1Q96F81 1524 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 TRIOBPQ9H2D6 2365 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 ABCA3Q99758 1704 aa2.45□□□□□ -2.02
LSM5-205ENST00000409952 ERBINQ96RT1 1412 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 NAV2Q8IVL1 2488 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 ABCC3O15438 1527 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 EHBP1L1Q8N3D4 1523 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 ABCA9Q8IUA7 1624 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 TRAV12-2A0A075B6T6 113 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 EDF1O60869 148 aaKnown RBP2.44□□□□□ -2.02
LSM5-205ENST00000409952 HYPMO75409 117 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 BTG2P78543 158 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 MIR22HGQ0VDD5 57 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 FOXI2Q6ZQN5 318 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 Q6ZUT4 128 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 RERGLQ9H628 205 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 POLEQ07864 2286 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 A2ML1A8K2U0 1454 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 MBD5Q9P267 1494 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 COL6A3P12111 3177 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 TIAM1Q13009 1591 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 CASZ1Q86V15 1759 aa2.44□□□□□ -2.02
LSM5-205ENST00000409952 ABCC5O15440 1437 aa2.43□□□□□ -2.02
LSM5-205ENST00000409952 EFCAB6Q5THR3 1501 aa2.43□□□□□ -2.02
LSM5-205ENST00000409952 COL4A2P08572 1712 aa2.43□□□□□ -2.02
LSM5-205ENST00000409952 PRO0461Q9UI25 63 aa2.43□□□□□ -2.02
LSM5-205ENST00000409952 CHD6Q8TD26 2715 aa2.43□□□□□ -2.02
LSM5-205ENST00000409952 AGLP35573 1532 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 UNC80Q8N2C7 3258 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 ZDBF2Q9HCK1 2354 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 CROCC2H7BZ55 1655 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 C20orf202A1L168 122 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 PITX3O75364 302 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 SMIM6P0DI80 62 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 MIC13Q5XKP0 118 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 ZCCHC23Q6ZST2 131 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 FP248Q71RG6 208 aaPredicted RBP2.42□□□□□ -2.02
LSM5-205ENST00000409952 GKN2Q86XP6 184 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 SNX29P2Q8IUI4 249 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 COPS9Q8WXC6 57 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 NOP16Q9Y3C1 178 aaKnown RBP2.42□□□□□ -2.02
LSM5-205ENST00000409952 FLNBO75369 2602 aaKnown RBP2.42□□□□□ -2.02
LSM5-205ENST00000409952 ANAPC1Q9H1A4 1944 aa2.42□□□□□ -2.02
LSM5-205ENST00000409952 USP9XQ93008 2570 aaPredicted RBP2.42□□□□□ -2.02
LSM5-205ENST00000409952 CDK5RAP2Q96SN8 1893 aa2.41□□□□□ -2.02
LSM5-205ENST00000409952 KDM5AP29375 1690 aaKnown RBP2.41□□□□□ -2.02
LSM5-205ENST00000409952 SPAARA0A1B0GVQ0 90 aa2.41□□□□□ -2.02
LSM5-205ENST00000409952 RBP2P50120 134 aa2.41□□□□□ -2.02
LSM5-205ENST00000409952 OR10AG1Q8NH19 301 aa2.41□□□□□ -2.02
LSM5-205ENST00000409952 PPP3R2Q96LZ3 170 aa2.41□□□□□ -2.02
LSM5-205ENST00000409952 COA4Q9NYJ1 87 aa2.41□□□□□ -2.02
LSM5-205ENST00000409952 BOKQ9UMX3 212 aaPredicted RBP2.41□□□□□ -2.02
LSM5-205ENST00000409952 NALCNQ8IZF0 1738 aa2.41□□□□□ -2.02
LSM5-205ENST00000409952 MARF1Q9Y4F3 1742 aaKnown RBP2.41□□□□□ -2.02
LSM5-205ENST00000409952 ABCC1P33527 1531 aa2.41□□□□□ -2.02
LSM5-205ENST00000409952 ATP7AQ04656 1500 aa2.41□□□□□ -2.02
LSM5-205ENST00000409952 EPG5Q9HCE0 2579 aa2.41□□□□□ -2.02
LSM5-205ENST00000409952 TTC28Q96AY4 2481 aa2.41□□□□□ -2.02
LSM5-205ENST00000409952 DIP2CQ9Y2E4 1556 aa2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms