RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TYMSP04818 313 aa12.2□□□□□ -0.46
LSM5-204ENST00000409909 SFTA3P0C7M3 94 aa12.2□□□□□ -0.46
LSM5-204ENST00000409909 CRYBA4P53673 196 aa12.2□□□□□ -0.46
LSM5-204ENST00000409909 C6orf223Q8N319 242 aa12.2□□□□□ -0.46
LSM5-204ENST00000409909 ZNF479Q96JC4 524 aa12.2□□□□□ -0.46
LSM5-204ENST00000409909 C11orf21Q9P2W6 132 aa12.2□□□□□ -0.46
LSM5-204ENST00000409909 PSG8Q9UQ74 426 aa12.2□□□□□ -0.46
LSM5-204ENST00000409909 CTXND1A0A1B0GTU2 59 aa12.19□□□□□ -0.46
LSM5-204ENST00000409909 A0A1W2PRE2 83 aa12.19□□□□□ -0.46
LSM5-204ENST00000409909 TAAR5O14804 337 aa12.19□□□□□ -0.46
LSM5-204ENST00000409909 IQCF2Q8IXL9 164 aa12.19□□□□□ -0.46
LSM5-204ENST00000409909 K7EQM0 130 aa12.18□□□□□ -0.46
LSM5-204ENST00000409909 FLI1Q01543 452 aaPredicted RBP12.18□□□□□ -0.46
LSM5-204ENST00000409909 TNP2Q05952 138 aa12.18□□□□□ -0.46
LSM5-204ENST00000409909 SLAQ13239 276 aa12.18□□□□□ -0.46
LSM5-204ENST00000409909 CYB561D1Q8N8Q1 229 aa12.18□□□□□ -0.46
LSM5-204ENST00000409909 LINC00479Q96M42 142 aa12.18□□□□□ -0.46
LSM5-204ENST00000409909 NDFIP1Q9BT67 221 aa12.18□□□□□ -0.46
LSM5-204ENST00000409909 ICOSQ9Y6W8 199 aa12.18□□□□□ -0.46
LSM5-204ENST00000409909 TRGV4A0A0C4DH28 118 aa12.17□□□□□ -0.46
LSM5-204ENST00000409909 M0R2P5 195 aa12.17□□□□□ -0.46
LSM5-204ENST00000409909 FGF8P55075 233 aaPredicted RBP12.17□□□□□ -0.46
LSM5-204ENST00000409909 AKR1C8PQ5T2L2 129 aa12.17□□□□□ -0.46
LSM5-204ENST00000409909 PRNTQ86SH4 94 aa12.17□□□□□ -0.46
LSM5-204ENST00000409909 TMEM75Q8N9X5 138 aa12.17□□□□□ -0.46
LSM5-204ENST00000409909 KCNS1Q96KK3 526 aa12.17□□□□□ -0.46
LSM5-204ENST00000409909 SDF2L1Q9HCN8 221 aa12.17□□□□□ -0.46
LSM5-204ENST00000409909 TRAV34A0A0B4J273 112 aa12.16□□□□□ -0.46
LSM5-204ENST00000409909 GCGP01275 180 aa12.16□□□□□ -0.46
LSM5-204ENST00000409909 UBE2G2P60604 165 aa12.16□□□□□ -0.46
LSM5-204ENST00000409909 TRAV4A0A0B4J268 109 aa12.15□□□□□ -0.46
LSM5-204ENST00000409909 PFN1P07737 140 aaKnown RBP12.15□□□□□ -0.46
LSM5-204ENST00000409909 OR11H4Q8NGC9 324 aa12.15□□□□□ -0.46
LSM5-204ENST00000409909 FAM74A7A6NL05 159 aa12.14□□□□□ -0.47
LSM5-204ENST00000409909 MRPL23Q16540 153 aaKnown RBP12.14□□□□□ -0.47
LSM5-204ENST00000409909 SMUG1Q53HV7 270 aa12.14□□□□□ -0.47
LSM5-204ENST00000409909 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
LSM5-204ENST00000409909 LYPD5Q6UWN5 251 aa12.14□□□□□ -0.47
LSM5-204ENST00000409909 KCNRGQ8N5I3 272 aa12.14□□□□□ -0.47
LSM5-204ENST00000409909 OR4C5Q8NGB2 326 aa12.14□□□□□ -0.47
LSM5-204ENST00000409909 A0A1W2PPQ1 181 aa12.13□□□□□ -0.47
LSM5-204ENST00000409909 MAP1LC3B2A6NCE7 125 aa12.13□□□□□ -0.47
LSM5-204ENST00000409909 FBLL1A6NHQ2 334 aaKnown RBP12.13□□□□□ -0.47
LSM5-204ENST00000409909 K7EQD1 137 aa12.13□□□□□ -0.47
LSM5-204ENST00000409909 NXPH4O95158 308 aa12.13□□□□□ -0.47
LSM5-204ENST00000409909 IFNA7P01567 189 aa12.13□□□□□ -0.47
LSM5-204ENST00000409909 FHITP49789 147 aa12.13□□□□□ -0.47
LSM5-204ENST00000409909 SAPCD1Q5SSQ6 148 aa12.13□□□□□ -0.47
LSM5-204ENST00000409909 MAP1LC3BQ9GZQ8 125 aa12.13□□□□□ -0.47
LSM5-204ENST00000409909 PEX7O00628 323 aa12.12□□□□□ -0.47
LSM5-204ENST00000409909 GYPEP15421 78 aa12.12□□□□□ -0.47
LSM5-204ENST00000409909 ZNF345Q14585 488 aa12.12□□□□□ -0.47
LSM5-204ENST00000409909 ZFP69Q49AA0 526 aa12.12□□□□□ -0.47
LSM5-204ENST00000409909 NEGR1Q7Z3B1 354 aa12.12□□□□□ -0.47
LSM5-204ENST00000409909 ZNF575Q86XF7 245 aa12.12□□□□□ -0.47
LSM5-204ENST00000409909 ARL2-SNX15V9GYD0 113 aa12.12□□□□□ -0.47
LSM5-204ENST00000409909 HMSDA8MTL9 139 aa12.11□□□□□ -0.47
LSM5-204ENST00000409909 C9JCJ5 164 aa12.11□□□□□ -0.47
LSM5-204ENST00000409909 SIVA1O15304 175 aa12.11□□□□□ -0.47
LSM5-204ENST00000409909 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
LSM5-204ENST00000409909 DPPA3Q6W0C5 159 aa12.11□□□□□ -0.47
LSM5-204ENST00000409909 C9orf85Q96MD7 179 aa12.11□□□□□ -0.47
LSM5-204ENST00000409909 NKX6-2Q9C056 277 aaPredicted RBP12.11□□□□□ -0.47
LSM5-204ENST00000409909 RYR1P21817 5038 aa12.11□□□□□ -0.47
LSM5-204ENST00000409909 LOC100131303A0A0U1RQF7 123 aa12.1□□□□□ -0.47
LSM5-204ENST00000409909 MED14OSP0DP75 135 aa12.1□□□□□ -0.47
LSM5-204ENST00000409909 SRIP30626 198 aa12.1□□□□□ -0.47
LSM5-204ENST00000409909 Q86TA4 180 aa12.1□□□□□ -0.47
LSM5-204ENST00000409909 HIST1H2BAQ96A08 127 aa12.1□□□□□ -0.47
LSM5-204ENST00000409909 LRP1BQ9NZR2 4599 aa12.1□□□□□ -0.47
LSM5-204ENST00000409909 IGKV3D-20A0A0C4DH25 116 aa12.09□□□□□ -0.47
LSM5-204ENST00000409909 ORM1P02763 201 aa12.09□□□□□ -0.47
LSM5-204ENST00000409909 RNASE3P12724 160 aaKnown RBP12.09□□□□□ -0.47
LSM5-204ENST00000409909 GATA1P15976 413 aaPredicted RBP12.09□□□□□ -0.47
LSM5-204ENST00000409909 PPT1P50897 306 aa12.09□□□□□ -0.47
LSM5-204ENST00000409909 CFAP126Q5VTH2 177 aa12.09□□□□□ -0.47
LSM5-204ENST00000409909 A0A0D9SG52 128 aa12.08□□□□□ -0.48
LSM5-204ENST00000409909 PGPEP1LA6NFU8 196 aa12.08□□□□□ -0.48
LSM5-204ENST00000409909 RS1O15537 224 aa12.08□□□□□ -0.48
LSM5-204ENST00000409909 SEC11BP0C7V7 166 aa12.08□□□□□ -0.48
LSM5-204ENST00000409909 CRIP1P50238 77 aa12.08□□□□□ -0.48
LSM5-204ENST00000409909 PCNPQ8WW12 178 aaKnown RBP12.08□□□□□ -0.48
LSM5-204ENST00000409909 PCLOQ9Y6V0 5065 aa12.08□□□□□ -0.48
LSM5-204ENST00000409909 FABP5P3A8MUU1 101 aa12.07□□□□□ -0.48
LSM5-204ENST00000409909 BCL2L11O43521 198 aa12.07□□□□□ -0.48
LSM5-204ENST00000409909 LINC00315P59091 139 aa12.07□□□□□ -0.48
LSM5-204ENST00000409909 ZNF506Q5JVG8 444 aa12.07□□□□□ -0.48
LSM5-204ENST00000409909 STOML3Q8TAV4 291 aa12.07□□□□□ -0.48
LSM5-204ENST00000409909 PTH2Q96A98 100 aa12.07□□□□□ -0.48
LSM5-204ENST00000409909 ZC2HC1AQ96GY0 325 aa12.07□□□□□ -0.48
LSM5-204ENST00000409909 BTF3P20290 206 aaKnown RBP12.06□□□□□ -0.48
LSM5-204ENST00000409909 CST9LP1Q5W188 147 aa12.06□□□□□ -0.48
LSM5-204ENST00000409909 Q6ZRN7 208 aaPredicted RBP12.06□□□□□ -0.48
LSM5-204ENST00000409909 COX8CQ7Z4L0 72 aa12.06□□□□□ -0.48
LSM5-204ENST00000409909 SLC25A29Q8N8R3 303 aa12.06□□□□□ -0.48
LSM5-204ENST00000409909 FAM213BQ8TBF2 198 aa12.06□□□□□ -0.48
LSM5-204ENST00000409909 SFT2D1Q8WV19 159 aa12.06□□□□□ -0.48
LSM5-204ENST00000409909 MBD3L1Q8WWY6 194 aa12.06□□□□□ -0.48
LSM5-204ENST00000409909 ZNF471Q9BX82 626 aaPredicted RBP12.06□□□□□ -0.48
LSM5-204ENST00000409909 IGHV3-73A0A0B4J1V6 119 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms