RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 LYPD6BQ8NI32 183 aa15.79■□□□□ 0.12
PTCD3-203ENST00000409783 C11orf52Q96A22 123 aa15.79■□□□□ 0.12
PTCD3-203ENST00000409783 RYR3Q15413 4870 aa15.79■□□□□ 0.12
PTCD3-203ENST00000409783 IGHV4-4A0A075B6R2 117 aa15.78■□□□□ 0.12
PTCD3-203ENST00000409783 CRIP1P50238 77 aa15.78■□□□□ 0.12
PTCD3-203ENST00000409783 BLOC1S1P78537 153 aa15.78■□□□□ 0.12
PTCD3-203ENST00000409783 ZNF415Q09FC8 603 aa15.78■□□□□ 0.12
PTCD3-203ENST00000409783 ZC2HC1AQ96GY0 325 aa15.78■□□□□ 0.12
PTCD3-203ENST00000409783 TXNDC17Q9BRA2 123 aa15.78■□□□□ 0.12
PTCD3-203ENST00000409783 RYR2Q92736 4967 aa15.78■□□□□ 0.12
PTCD3-203ENST00000409783 TRGV11A0A075B6L2 103 aa15.77■□□□□ 0.12
PTCD3-203ENST00000409783 GAGE12BA1L429 117 aa15.77■□□□□ 0.12
PTCD3-203ENST00000409783 GAGE7O76087 117 aa15.77■□□□□ 0.12
PTCD3-203ENST00000409783 TYMSP04818 313 aa15.77■□□□□ 0.12
PTCD3-203ENST00000409783 GAGE12FP0CL80 117 aa15.77■□□□□ 0.12
PTCD3-203ENST00000409783 GAGE12GP0CL81 117 aa15.77■□□□□ 0.12
PTCD3-203ENST00000409783 GAGE12IP0CL82 117 aa15.77■□□□□ 0.12
PTCD3-203ENST00000409783 BCL2P10415 239 aa15.77■□□□□ 0.12
PTCD3-203ENST00000409783 HTN3P15516 51 aa15.77■□□□□ 0.12
PTCD3-203ENST00000409783 TCTAP57738 103 aa15.77■□□□□ 0.12
PTCD3-203ENST00000409783 IGHV3-16A0A0C4DH30 117 aa15.76■□□□□ 0.11
PTCD3-203ENST00000409783 ATP5G1P05496 136 aa15.76■□□□□ 0.11
PTCD3-203ENST00000409783 S100A9P06702 114 aaKnown RBP15.76■□□□□ 0.11
PTCD3-203ENST00000409783 KCNS1Q96KK3 526 aa15.76■□□□□ 0.11
PTCD3-203ENST00000409783 C18orf15Q96N68 181 aa15.76■□□□□ 0.11
PTCD3-203ENST00000409783 IFNA1P01562 189 aa15.75■□□□□ 0.11
PTCD3-203ENST00000409783 MEF2BQ02080 365 aaPredicted RBP15.75■□□□□ 0.11
PTCD3-203ENST00000409783 LINC00476Q8WZB0 136 aa15.75■□□□□ 0.11
PTCD3-203ENST00000409783 FAM210BQ96KR6 192 aa15.75■□□□□ 0.11
PTCD3-203ENST00000409783 SDF2L1Q9HCN8 221 aa15.75■□□□□ 0.11
PTCD3-203ENST00000409783 TRGV1A0A0A0MS02 117 aa15.74■□□□□ 0.11
PTCD3-203ENST00000409783 FABP5P3A8MUU1 101 aa15.74■□□□□ 0.11
PTCD3-203ENST00000409783 LGALS9BQ3B8N2 356 aa15.74■□□□□ 0.11
PTCD3-203ENST00000409783 SPXQ9BT56 116 aa15.74■□□□□ 0.11
PTCD3-203ENST00000409783 DERL1Q9BUN8 251 aa15.74■□□□□ 0.11
PTCD3-203ENST00000409783 MLST8Q9BVC4 326 aa15.74■□□□□ 0.11
PTCD3-203ENST00000409783 VAX2Q9UIW0 290 aa15.74■□□□□ 0.11
PTCD3-203ENST00000409783 VPS13DQ5THJ4 4388 aa15.73■□□□□ 0.11
PTCD3-203ENST00000409783 IGKV3D-20A0A0C4DH25 116 aa15.73■□□□□ 0.11
PTCD3-203ENST00000409783 ZNF674Q2M3X9 581 aa15.73■□□□□ 0.11
PTCD3-203ENST00000409783 MRPL16Q9NX20 251 aaKnown RBP15.73■□□□□ 0.11
PTCD3-203ENST00000409783 MUC4Q99102 2169 aa15.73■□□□□ 0.11
PTCD3-203ENST00000409783 TAGLN2P37802 199 aaKnown RBP15.72■□□□□ 0.11
PTCD3-203ENST00000409783 RPL35P42766 123 aaKnown RBP15.72■□□□□ 0.11
PTCD3-203ENST00000409783 TMEM88Q6PEY1 159 aa15.72■□□□□ 0.11
PTCD3-203ENST00000409783 NHLRC2Q8NBF2 726 aa15.72■□□□□ 0.11
PTCD3-203ENST00000409783 HYDINQ4G0P3 5121 aa15.72■□□□□ 0.11
PTCD3-203ENST00000409783 F5H768 121 aa15.71■□□□□ 0.11
PTCD3-203ENST00000409783 PDE6DO43924 150 aa15.71■□□□□ 0.11
PTCD3-203ENST00000409783 SH2D1AO60880 128 aa15.71■□□□□ 0.11
PTCD3-203ENST00000409783 HOXA5P20719 270 aa15.71■□□□□ 0.11
PTCD3-203ENST00000409783 TEX261Q6UWH6 196 aa15.71■□□□□ 0.11
PTCD3-203ENST00000409783 ZNF575Q86XF7 245 aa15.71■□□□□ 0.11
PTCD3-203ENST00000409783 BAGE2Q86Y30 109 aa15.71■□□□□ 0.11
PTCD3-203ENST00000409783 NDUFAF3Q9BU61 184 aa15.71■□□□□ 0.11
PTCD3-203ENST00000409783 FAM162BQ5T6X4 162 aa15.7■□□□□ 0.1
PTCD3-203ENST00000409783 RASL10AQ92737 203 aa15.7■□□□□ 0.1
PTCD3-203ENST00000409783 TRGV2A0A075B6R0 118 aa15.69■□□□□ 0.1
PTCD3-203ENST00000409783 RNASE3P12724 160 aaKnown RBP15.69■□□□□ 0.1
PTCD3-203ENST00000409783 LGALS9CQ6DKI2 356 aa15.69■□□□□ 0.1
PTCD3-203ENST00000409783 C9orf85Q96MD7 179 aa15.69■□□□□ 0.1
PTCD3-203ENST00000409783 KRBOX1C9JBD0 128 aa15.68■□□□□ 0.1
PTCD3-203ENST00000409783 RAB19A4D1S5 217 aa15.67■□□□□ 0.1
PTCD3-203ENST00000409783 RBFOX3A6NFN3 312 aa15.67■□□□□ 0.1
PTCD3-203ENST00000409783 M0R2P5 195 aa15.67■□□□□ 0.1
PTCD3-203ENST00000409783 IGLV2-8P01709 118 aa15.67■□□□□ 0.1
PTCD3-203ENST00000409783 ZNF506Q5JVG8 444 aa15.67■□□□□ 0.1
PTCD3-203ENST00000409783 MED9Q9NWA0 146 aa15.67■□□□□ 0.1
PTCD3-203ENST00000409783 TRBV20OR9-2A0A075B6H5 130 aa15.66■□□□□ 0.1
PTCD3-203ENST00000409783 LY6G6CO95867 125 aa15.66■□□□□ 0.1
PTCD3-203ENST00000409783 ORM1P02763 201 aa15.66■□□□□ 0.1
PTCD3-203ENST00000409783 LINC01559Q495D7 138 aa15.66■□□□□ 0.1
PTCD3-203ENST00000409783 CENPWQ5EE01 88 aa15.66■□□□□ 0.1
PTCD3-203ENST00000409783 DNLZQ5SXM8 178 aa15.66■□□□□ 0.1
PTCD3-203ENST00000409783 POM121L12Q8N7R1 296 aa15.66■□□□□ 0.1
PTCD3-203ENST00000409783 NACAE9PAV3 2078 aa15.66■□□□□ 0.1
PTCD3-203ENST00000409783 B4DEV8 164 aa15.65■□□□□ 0.1
PTCD3-203ENST00000409783 M0R036 132 aa15.65■□□□□ 0.1
PTCD3-203ENST00000409783 OR5I1Q13606 314 aa15.64■□□□□ 0.09
PTCD3-203ENST00000409783 C15orf53Q8NAA6 179 aa15.64■□□□□ 0.09
PTCD3-203ENST00000409783 PCNPQ8WW12 178 aaKnown RBP15.64■□□□□ 0.09
PTCD3-203ENST00000409783 TRAV26-1A0A087WT03 109 aa15.63■□□□□ 0.09
PTCD3-203ENST00000409783 IGHV3-53P01767 116 aa15.63■□□□□ 0.09
PTCD3-203ENST00000409783 PTH2Q96A98 100 aa15.63■□□□□ 0.09
PTCD3-203ENST00000409783 FAM210AQ96ND0 272 aa15.63■□□□□ 0.09
PTCD3-203ENST00000409783 TMEM250H0YL14 139 aa15.62■□□□□ 0.09
PTCD3-203ENST00000409783 ASIPP42127 132 aa15.62■□□□□ 0.09
PTCD3-203ENST00000409783 FHL2Q14192 279 aa15.62■□□□□ 0.09
PTCD3-203ENST00000409783 TOR2AQ5JU69 321 aa15.62■□□□□ 0.09
PTCD3-203ENST00000409783 SMIM12Q96EX1 92 aa15.62■□□□□ 0.09
PTCD3-203ENST00000409783 VSIG2Q96IQ7 327 aa15.62■□□□□ 0.09
PTCD3-203ENST00000409783 ZNF479Q96JC4 524 aa15.62■□□□□ 0.09
PTCD3-203ENST00000409783 IL36BQ9NZH7 164 aa15.62■□□□□ 0.09
PTCD3-203ENST00000409783 KMT2AQ03164 3969 aa15.61■□□□□ 0.09
PTCD3-203ENST00000409783 GRIFINA4D1Z8 144 aa15.61■□□□□ 0.09
PTCD3-203ENST00000409783 PGPEP1LA6NFU8 196 aa15.61■□□□□ 0.09
PTCD3-203ENST00000409783 SFTA3P0C7M3 94 aa15.61■□□□□ 0.09
PTCD3-203ENST00000409783 GNG4P50150 75 aa15.61■□□□□ 0.09
PTCD3-203ENST00000409783 PRR27Q6MZM9 219 aa15.61■□□□□ 0.09
PTCD3-203ENST00000409783 TMSB15BA0A087X1C1 80 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms