RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 TRGV4A0A0C4DH28 118 aa13.51□□□□□ -0.25
TSPAN4-209ENST00000409543 A0A1W2PPQ1 181 aa13.51□□□□□ -0.25
TSPAN4-209ENST00000409543 GGTLC3B5MD39 225 aa13.51□□□□□ -0.25
TSPAN4-209ENST00000409543 TNP2Q05952 138 aa13.51□□□□□ -0.25
TSPAN4-209ENST00000409543 KCNS1Q96KK3 526 aa13.51□□□□□ -0.25
TSPAN4-209ENST00000409543 SDF2L1Q9HCN8 221 aa13.51□□□□□ -0.25
TSPAN4-209ENST00000409543 PSG8Q9UQ74 426 aa13.51□□□□□ -0.25
TSPAN4-209ENST00000409543 TAAR5O14804 337 aa13.5□□□□□ -0.25
TSPAN4-209ENST00000409543 ZNF726P1Q15940 193 aa13.5□□□□□ -0.25
TSPAN4-209ENST00000409543 ZNF479Q96JC4 524 aa13.5□□□□□ -0.25
TSPAN4-209ENST00000409543 KRTAP1-5Q9BYS1 174 aa13.5□□□□□ -0.25
TSPAN4-209ENST00000409543 CTXND1A0A1B0GTU2 59 aa13.49□□□□□ -0.25
TSPAN4-209ENST00000409543 A0A1W2PRE2 83 aa13.49□□□□□ -0.25
TSPAN4-209ENST00000409543 FBLL1A6NHQ2 334 aaKnown RBP13.49□□□□□ -0.25
TSPAN4-209ENST00000409543 M0R2P5 195 aa13.49□□□□□ -0.25
TSPAN4-209ENST00000409543 IGLV2-11P01706 119 aa13.49□□□□□ -0.25
TSPAN4-209ENST00000409543 TYMSP04818 313 aa13.49□□□□□ -0.25
TSPAN4-209ENST00000409543 SFTA3P0C7M3 94 aa13.49□□□□□ -0.25
TSPAN4-209ENST00000409543 MED14OSP0DP75 135 aa13.49□□□□□ -0.25
TSPAN4-209ENST00000409543 MRPL23Q16540 153 aaKnown RBP13.49□□□□□ -0.25
TSPAN4-209ENST00000409543 CYB561D1Q8N8Q1 229 aa13.49□□□□□ -0.25
TSPAN4-209ENST00000409543 ARPC5O15511 151 aa13.48□□□□□ -0.25
TSPAN4-209ENST00000409543 BTF3P20290 206 aaKnown RBP13.48□□□□□ -0.25
TSPAN4-209ENST00000409543 FLI1Q01543 452 aaPredicted RBP13.48□□□□□ -0.25
TSPAN4-209ENST00000409543 TMEM75Q8N9X5 138 aa13.48□□□□□ -0.25
TSPAN4-209ENST00000409543 TRAV4A0A0B4J268 109 aa13.47□□□□□ -0.25
TSPAN4-209ENST00000409543 ZNF80P51504 273 aaPredicted RBP13.47□□□□□ -0.25
TSPAN4-209ENST00000409543 AKR1C8PQ5T2L2 129 aa13.47□□□□□ -0.25
TSPAN4-209ENST00000409543 CYTL1Q9NRR1 136 aa13.47□□□□□ -0.25
TSPAN4-209ENST00000409543 GCGP01275 180 aa13.46□□□□□ -0.25
TSPAN4-209ENST00000409543 PFN1P07737 140 aaKnown RBP13.46□□□□□ -0.25
TSPAN4-209ENST00000409543 SMUG1Q53HV7 270 aa13.46□□□□□ -0.25
TSPAN4-209ENST00000409543 SAPCD1Q5SSQ6 148 aa13.46□□□□□ -0.25
TSPAN4-209ENST00000409543 LYPD5Q6UWN5 251 aa13.46□□□□□ -0.25
TSPAN4-209ENST00000409543 NEGR1Q7Z3B1 354 aa13.46□□□□□ -0.25
TSPAN4-209ENST00000409543 PRNTQ86SH4 94 aa13.46□□□□□ -0.25
TSPAN4-209ENST00000409543 OR4C5Q8NGB2 326 aa13.46□□□□□ -0.25
TSPAN4-209ENST00000409543 C11orf21Q9P2W6 132 aa13.46□□□□□ -0.25
TSPAN4-209ENST00000409543 SIVA1O15304 175 aa13.45□□□□□ -0.26
TSPAN4-209ENST00000409543 NXPH4O95158 308 aa13.45□□□□□ -0.26
TSPAN4-209ENST00000409543 ORM1P02763 201 aa13.45□□□□□ -0.26
TSPAN4-209ENST00000409543 ZFP69Q49AA0 526 aa13.45□□□□□ -0.26
TSPAN4-209ENST00000409543 K7EQD1 137 aa13.44□□□□□ -0.26
TSPAN4-209ENST00000409543 IFNA7P01567 189 aa13.44□□□□□ -0.26
TSPAN4-209ENST00000409543 PCNPQ8WW12 178 aaKnown RBP13.44□□□□□ -0.26
TSPAN4-209ENST00000409543 NKX6-2Q9C056 277 aaPredicted RBP13.44□□□□□ -0.26
TSPAN4-209ENST00000409543 SMLR1H3BR10 107 aa13.43□□□□□ -0.26
TSPAN4-209ENST00000409543 GYPEP15421 78 aa13.43□□□□□ -0.26
TSPAN4-209ENST00000409543 SRIP30626 198 aa13.43□□□□□ -0.26
TSPAN4-209ENST00000409543 FGF8P55075 233 aaPredicted RBP13.43□□□□□ -0.26
TSPAN4-209ENST00000409543 UBE2G2P60604 165 aa13.43□□□□□ -0.26
TSPAN4-209ENST00000409543 ZNF575Q86XF7 245 aa13.43□□□□□ -0.26
TSPAN4-209ENST00000409543 LINC00479Q96M42 142 aa13.43□□□□□ -0.26
TSPAN4-209ENST00000409543 FAM74A7A6NL05 159 aa13.42□□□□□ -0.26
TSPAN4-209ENST00000409543 C9JCJ5 164 aa13.42□□□□□ -0.26
TSPAN4-209ENST00000409543 PPT1P50897 306 aa13.42□□□□□ -0.26
TSPAN4-209ENST00000409543 ZNF876PQ49A33 203 aa13.42□□□□□ -0.26
TSPAN4-209ENST00000409543 TRAV34A0A0B4J273 112 aa13.41□□□□□ -0.26
TSPAN4-209ENST00000409543 PEX7O00628 323 aa13.41□□□□□ -0.26
TSPAN4-209ENST00000409543 ZNF345Q14585 488 aa13.41□□□□□ -0.26
TSPAN4-209ENST00000409543 KCNRGQ8N5I3 272 aa13.41□□□□□ -0.26
TSPAN4-209ENST00000409543 HIST1H2BAQ96A08 127 aa13.41□□□□□ -0.26
TSPAN4-209ENST00000409543 PTH2Q96A98 100 aa13.41□□□□□ -0.26
TSPAN4-209ENST00000409543 C9orf85Q96MD7 179 aa13.41□□□□□ -0.26
TSPAN4-209ENST00000409543 MAP1LC3B2A6NCE7 125 aa13.4□□□□□ -0.26
TSPAN4-209ENST00000409543 CIDEAO60543 219 aa13.4□□□□□ -0.26
TSPAN4-209ENST00000409543 GATA1P15976 413 aaPredicted RBP13.4□□□□□ -0.26
TSPAN4-209ENST00000409543 TXNDC17Q9BRA2 123 aa13.4□□□□□ -0.26
TSPAN4-209ENST00000409543 MAP1LC3BQ9GZQ8 125 aa13.4□□□□□ -0.26
TSPAN4-209ENST00000409543 ARL2-SNX15V9GYD0 113 aa13.4□□□□□ -0.26
TSPAN4-209ENST00000409543 RS1O15537 224 aa13.39□□□□□ -0.27
TSPAN4-209ENST00000409543 LINC00315P59091 139 aa13.39□□□□□ -0.27
TSPAN4-209ENST00000409543 STOML3Q8TAV4 291 aa13.39□□□□□ -0.27
TSPAN4-209ENST00000409543 HMSDA8MTL9 139 aa13.38□□□□□ -0.27
TSPAN4-209ENST00000409543 FABP5P3A8MUU1 101 aa13.38□□□□□ -0.27
TSPAN4-209ENST00000409543 C16orf90A8MZG2 172 aa13.38□□□□□ -0.27
TSPAN4-209ENST00000409543 RNASE3P12724 160 aaKnown RBP13.38□□□□□ -0.27
TSPAN4-209ENST00000409543 CFAP126Q5VTH2 177 aa13.38□□□□□ -0.27
TSPAN4-209ENST00000409543 SH2D6Q7Z4S9 175 aa13.38□□□□□ -0.27
TSPAN4-209ENST00000409543 Q86TA4 180 aa13.38□□□□□ -0.27
TSPAN4-209ENST00000409543 DPPA3Q6W0C5 159 aa13.37□□□□□ -0.27
TSPAN4-209ENST00000409543 OR11H4Q8NGC9 324 aa13.37□□□□□ -0.27
TSPAN4-209ENST00000409543 TRAV9-2A0A087WT02 112 aa13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 IGKV3D-20A0A0C4DH25 116 aa13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 A0A0D9SG52 128 aa13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 LOC100131303A0A0U1RQF7 123 aa13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 PGPEP1LA6NFU8 196 aa13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 SEC11BP0C7V7 166 aa13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 FHITP49789 147 aa13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 ZNF506Q5JVG8 444 aa13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 Q6ZRN7 208 aaPredicted RBP13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 COX8CQ7Z4L0 72 aa13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 TCEAL7Q9BRU2 100 aa13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 ZFP30Q9Y2G7 519 aa13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 LY96Q9Y6Y9 160 aa13.36□□□□□ -0.27
TSPAN4-209ENST00000409543 TRBV6-4A0A1B0GX49 114 aa13.35□□□□□ -0.27
TSPAN4-209ENST00000409543 K7EP13 123 aa13.35□□□□□ -0.27
TSPAN4-209ENST00000409543 TIRAPP58753 221 aa13.35□□□□□ -0.27
TSPAN4-209ENST00000409543 WFDC10BQ8IUB3 73 aa13.35□□□□□ -0.27
TSPAN4-209ENST00000409543 SLC25A29Q8N8R3 303 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms