RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 HOXA5P20719 270 aa12.58□□□□□ -0.4
PDLIM2-206ENST00000409141 LGALS9BQ3B8N2 356 aa12.58□□□□□ -0.4
PDLIM2-206ENST00000409141 SMUG1Q53HV7 270 aa12.58□□□□□ -0.4
PDLIM2-206ENST00000409141 C18orf15Q96N68 181 aa12.58□□□□□ -0.4
PDLIM2-206ENST00000409141 GCGP01275 180 aa12.57□□□□□ -0.4
PDLIM2-206ENST00000409141 H2AFB1P0C5Y9 115 aa12.57□□□□□ -0.4
PDLIM2-206ENST00000409141 ZNF80P51504 273 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-206ENST00000409141 KCNS1Q96KK3 526 aa12.57□□□□□ -0.4
PDLIM2-206ENST00000409141 SDF2L1Q9HCN8 221 aa12.57□□□□□ -0.4
PDLIM2-206ENST00000409141 TRAV26-1A0A087WT03 109 aa12.56□□□□□ -0.4
PDLIM2-206ENST00000409141 A0A0J9YY99 117 aa12.56□□□□□ -0.4
PDLIM2-206ENST00000409141 PAGE4O60829 102 aa12.56□□□□□ -0.4
PDLIM2-206ENST00000409141 RNF212Q495C1 297 aa12.56□□□□□ -0.4
PDLIM2-206ENST00000409141 EIF5AL1Q6IS14 154 aaKnown RBP12.56□□□□□ -0.4
PDLIM2-206ENST00000409141 SPXQ9BT56 116 aa12.56□□□□□ -0.4
PDLIM2-206ENST00000409141 KMT2AQ03164 3969 aa12.56□□□□□ -0.4
PDLIM2-206ENST00000409141 PFN1P07737 140 aaKnown RBP12.55□□□□□ -0.4
PDLIM2-206ENST00000409141 ARL2-SNX15V9GYD0 113 aa12.55□□□□□ -0.4
PDLIM2-206ENST00000409141 IGHV3-16A0A0C4DH30 117 aa12.54□□□□□ -0.4
PDLIM2-206ENST00000409141 TYMSP04818 313 aa12.54□□□□□ -0.4
PDLIM2-206ENST00000409141 TCEAL7Q9BRU2 100 aa12.54□□□□□ -0.4
PDLIM2-206ENST00000409141 IGHV3-53P01767 116 aa12.53□□□□□ -0.4
PDLIM2-206ENST00000409141 RAB5CP51148 216 aa12.53□□□□□ -0.4
PDLIM2-206ENST00000409141 UBE2G1P62253 170 aa12.53□□□□□ -0.4
PDLIM2-206ENST00000409141 Q86TA4 180 aa12.53□□□□□ -0.4
PDLIM2-206ENST00000409141 SLC51BQ86UW2 128 aa12.53□□□□□ -0.4
PDLIM2-206ENST00000409141 C11orf21Q9P2W6 132 aa12.53□□□□□ -0.4
PDLIM2-206ENST00000409141 RASL10AQ92737 203 aa12.53□□□□□ -0.4
PDLIM2-206ENST00000409141 FMC1Q96HJ9 113 aa12.53□□□□□ -0.4
PDLIM2-206ENST00000409141 H3BNG1 76 aa12.52□□□□□ -0.41
PDLIM2-206ENST00000409141 ZFP30Q9Y2G7 519 aa12.52□□□□□ -0.41
PDLIM2-206ENST00000409141 FABP5P3A8MUU1 101 aa12.51□□□□□ -0.41
PDLIM2-206ENST00000409141 M0R2P5 195 aa12.51□□□□□ -0.41
PDLIM2-206ENST00000409141 CCL18P55774 89 aa12.51□□□□□ -0.41
PDLIM2-206ENST00000409141 MUC4Q99102 2169 aa12.5□□□□□ -0.41
PDLIM2-206ENST00000409141 AKR1C3P42330 323 aa12.5□□□□□ -0.41
PDLIM2-206ENST00000409141 SULT1A2P50226 295 aa12.5□□□□□ -0.41
PDLIM2-206ENST00000409141 VSIG2Q96IQ7 327 aa12.5□□□□□ -0.41
PDLIM2-206ENST00000409141 IGLV2-18A0A075B6J9 118 aa12.49□□□□□ -0.41
PDLIM2-206ENST00000409141 TRAV1-1A0A0B4J248 108 aa12.49□□□□□ -0.41
PDLIM2-206ENST00000409141 A0A1B0GVG6 124 aa12.49□□□□□ -0.41
PDLIM2-206ENST00000409141 TEX46H3BTG2 121 aa12.49□□□□□ -0.41
PDLIM2-206ENST00000409141 M0R2N4 97 aa12.49□□□□□ -0.41
PDLIM2-206ENST00000409141 PAX4O43316 350 aa12.49□□□□□ -0.41
PDLIM2-206ENST00000409141 FAM3BP58499 235 aaPredicted RBP12.49□□□□□ -0.41
PDLIM2-206ENST00000409141 CCL20P78556 96 aa12.49□□□□□ -0.41
PDLIM2-206ENST00000409141 C9orf62Q8N4C0 152 aa12.49□□□□□ -0.41
PDLIM2-206ENST00000409141 TRGV4A0A0C4DH28 118 aa12.48□□□□□ -0.41
PDLIM2-206ENST00000409141 TRBV6-1A0A0K0K1D8 114 aa12.48□□□□□ -0.41
PDLIM2-206ENST00000409141 SFTA3P0C7M3 94 aa12.48□□□□□ -0.41
PDLIM2-206ENST00000409141 SLAQ13239 276 aa12.48□□□□□ -0.41
PDLIM2-206ENST00000409141 FHL2Q14192 279 aa12.48□□□□□ -0.41
PDLIM2-206ENST00000409141 ZC2HC1AQ96GY0 325 aa12.48□□□□□ -0.41
PDLIM2-206ENST00000409141 ZNF479Q96JC4 524 aa12.48□□□□□ -0.41
PDLIM2-206ENST00000409141 GNG13Q9P2W3 67 aa12.48□□□□□ -0.41
PDLIM2-206ENST00000409141 PRO0255Q9UI72 69 aa12.48□□□□□ -0.41
PDLIM2-206ENST00000409141 HHLA3Q9XRX5 114 aa12.48□□□□□ -0.41
PDLIM2-206ENST00000409141 ORM1P02763 201 aa12.47□□□□□ -0.41
PDLIM2-206ENST00000409141 S100A9P06702 114 aaKnown RBP12.47□□□□□ -0.41
PDLIM2-206ENST00000409141 LINC00588Q9Y4M8 146 aa12.47□□□□□ -0.41
PDLIM2-206ENST00000409141 DNAH6Q9C0G6 4158 aa12.47□□□□□ -0.41
PDLIM2-206ENST00000409141 IGKV3D-20A0A0C4DH25 116 aa12.46□□□□□ -0.41
PDLIM2-206ENST00000409141 SCO2A0A1W2PP80 73 aa12.46□□□□□ -0.41
PDLIM2-206ENST00000409141 C9JCJ5 164 aa12.46□□□□□ -0.41
PDLIM2-206ENST00000409141 LTAP01374 205 aa12.46□□□□□ -0.41
PDLIM2-206ENST00000409141 ZNF876PQ49A33 203 aa12.46□□□□□ -0.41
PDLIM2-206ENST00000409141 COX8CQ7Z4L0 72 aa12.46□□□□□ -0.41
PDLIM2-206ENST00000409141 OR4C5Q8NGB2 326 aa12.46□□□□□ -0.41
PDLIM2-206ENST00000409141 MANBALQ9NQG1 85 aa12.46□□□□□ -0.41
PDLIM2-206ENST00000409141 EPPK1P58107 5090 aaKnown RBP12.46□□□□□ -0.41
PDLIM2-206ENST00000409141 TRAV4A0A0B4J268 109 aa12.46□□□□□ -0.42
PDLIM2-206ENST00000409141 CRIP1P50238 77 aa12.46□□□□□ -0.42
PDLIM2-206ENST00000409141 CRYBA4P53673 196 aa12.46□□□□□ -0.42
PDLIM2-206ENST00000409141 FAM162BQ5T6X4 162 aa12.46□□□□□ -0.42
PDLIM2-206ENST00000409141 A0A096LPF7 62 aa12.45□□□□□ -0.42
PDLIM2-206ENST00000409141 B4DEV8 164 aa12.45□□□□□ -0.42
PDLIM2-206ENST00000409141 SH2D1AO60880 128 aa12.45□□□□□ -0.42
PDLIM2-206ENST00000409141 S100A4P26447 101 aaKnown RBP12.45□□□□□ -0.42
PDLIM2-206ENST00000409141 ESRGQ1W209 222 aa12.45□□□□□ -0.42
PDLIM2-206ENST00000409141 C9orf85Q96MD7 179 aa12.45□□□□□ -0.42
PDLIM2-206ENST00000409141 ICOSQ9Y6W8 199 aa12.45□□□□□ -0.42
PDLIM2-206ENST00000409141 NACAE9PAV3 2078 aa12.44□□□□□ -0.42
PDLIM2-206ENST00000409141 RNASE3P12724 160 aaKnown RBP12.44□□□□□ -0.42
PDLIM2-206ENST00000409141 ASIPP42127 132 aa12.44□□□□□ -0.42
PDLIM2-206ENST00000409141 NHLRC2Q8NBF2 726 aa12.44□□□□□ -0.42
PDLIM2-206ENST00000409141 ZNRF2Q8NHG8 242 aa12.44□□□□□ -0.42
PDLIM2-206ENST00000409141 M0R036 132 aa12.43□□□□□ -0.42
PDLIM2-206ENST00000409141 ZNF674Q2M3X9 581 aa12.43□□□□□ -0.42
PDLIM2-206ENST00000409141 BAGE2Q86Y30 109 aa12.43□□□□□ -0.42
PDLIM2-206ENST00000409141 PGPEP1LA6NFU8 196 aa12.42□□□□□ -0.42
PDLIM2-206ENST00000409141 KRBOX1C9JBD0 128 aa12.42□□□□□ -0.42
PDLIM2-206ENST00000409141 IFNA1P01562 189 aa12.42□□□□□ -0.42
PDLIM2-206ENST00000409141 Q6ZR54 194 aa12.42□□□□□ -0.42
PDLIM2-206ENST00000409141 PTH2Q96A98 100 aa12.42□□□□□ -0.42
PDLIM2-206ENST00000409141 TXNDC17Q9BRA2 123 aa12.42□□□□□ -0.42
PDLIM2-206ENST00000409141 NKX2-5P52952 324 aaPredicted RBP12.41□□□□□ -0.42
PDLIM2-206ENST00000409141 MRPL23Q16540 153 aaKnown RBP12.41□□□□□ -0.42
PDLIM2-206ENST00000409141 ZNF506Q5JVG8 444 aa12.41□□□□□ -0.42
PDLIM2-206ENST00000409141 DNAH10Q8IVF4 4471 aa12.41□□□□□ -0.42
PDLIM2-206ENST00000409141 GRIFINA4D1Z8 144 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms