RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 RPL36AP83881 106 aaKnown RBP6.98□□□□□ -1.29
LIG4-202ENST00000405925 C9orf66Q5T8R8 295 aa6.98□□□□□ -1.29
LIG4-202ENST00000405925 RPL36ALQ969Q0 106 aaKnown RBP6.98□□□□□ -1.29
LIG4-202ENST00000405925 CHCHD5Q9BSY4 110 aa6.98□□□□□ -1.29
LIG4-202ENST00000405925 CYSLTR1Q9Y271 337 aa6.98□□□□□ -1.29
LIG4-202ENST00000405925 IGLC2P0DOY2 106 aa6.97□□□□□ -1.29
LIG4-202ENST00000405925 SRSF1Q07955 248 aaKnown RBP eCLIP6.97□□□□□ -1.291e-6■■■■□ 19.6
LIG4-202ENST00000405925 TMEM256Q8N2U0 113 aa6.97□□□□□ -1.29
LIG4-202ENST00000405925 ZNF503Q96F45 646 aa6.97□□□□□ -1.29
LIG4-202ENST00000405925 REV3LO60673 3130 aa6.97□□□□□ -1.29
LIG4-202ENST00000405925 IGHV3-16A0A0C4DH30 117 aa6.97□□□□□ -1.29
LIG4-202ENST00000405925 SPRY2O43597 315 aa6.97□□□□□ -1.29
LIG4-202ENST00000405925 EGR2P11161 476 aaPredicted RBP6.97□□□□□ -1.29
LIG4-202ENST00000405925 IFI27P40305 119 aaPredicted RBP6.97□□□□□ -1.29
LIG4-202ENST00000405925 PAX2Q02962 417 aa6.97□□□□□ -1.29
LIG4-202ENST00000405925 SPATA45Q537H7 98 aa6.97□□□□□ -1.29
LIG4-202ENST00000405925 PRADC1Q9BSG0 188 aa6.97□□□□□ -1.29
LIG4-202ENST00000405925 ZNF702PQ9H963 129 aa6.97□□□□□ -1.29
LIG4-202ENST00000405925 ORMDL2Q53FV1 153 aa6.96□□□□□ -1.29
LIG4-202ENST00000405925 C10orf91Q5T1B1 145 aa6.96□□□□□ -1.29
LIG4-202ENST00000405925 LINC01006Q8NI28 216 aa6.96□□□□□ -1.29
LIG4-202ENST00000405925 LENEPQ9Y5L5 61 aa6.96□□□□□ -1.29
LIG4-202ENST00000405925 GAGE12BA1L429 117 aa6.96□□□□□ -1.29
LIG4-202ENST00000405925 GAGE7O76087 117 aa6.96□□□□□ -1.29
LIG4-202ENST00000405925 GAGE12FP0CL80 117 aa6.96□□□□□ -1.29
LIG4-202ENST00000405925 GAGE12GP0CL81 117 aa6.96□□□□□ -1.29
LIG4-202ENST00000405925 GAGE12IP0CL82 117 aa6.96□□□□□ -1.29
LIG4-202ENST00000405925 APOC4P55056 127 aa6.96□□□□□ -1.29
LIG4-202ENST00000405925 GNRH2O43555 120 aa6.96□□□□□ -1.3
LIG4-202ENST00000405925 HILS1P60008 231 aa6.96□□□□□ -1.3
LIG4-202ENST00000405925 PHLDA1Q8WV24 401 aaPredicted RBP6.96□□□□□ -1.3
LIG4-202ENST00000405925 VCX2Q9H322 139 aa6.96□□□□□ -1.3
LIG4-202ENST00000405925 LOC102724200A0A096LPH7 203 aaPredicted RBP6.95□□□□□ -1.3
LIG4-202ENST00000405925 TRAV8-6A0A0B4J262 113 aa6.95□□□□□ -1.3
LIG4-202ENST00000405925 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
LIG4-202ENST00000405925 WIPF2Q8TF74 440 aaPredicted RBP6.95□□□□□ -1.3
LIG4-202ENST00000405925 CSTL1Q9H114 145 aa6.95□□□□□ -1.3
LIG4-202ENST00000405925 GSN-AS1Q9NRJ2 163 aa6.95□□□□□ -1.3
LIG4-202ENST00000405925 M0R143 59 aa6.95□□□□□ -1.3
LIG4-202ENST00000405925 OR11H2Q8NH07 326 aa6.95□□□□□ -1.3
LIG4-202ENST00000405925 A8MWP6 167 aa6.95□□□□□ -1.3
LIG4-202ENST00000405925 RNASE1P07998 156 aaKnown RBP6.95□□□□□ -1.3
LIG4-202ENST00000405925 PKIAP61925 76 aa6.95□□□□□ -1.3
LIG4-202ENST00000405925 VAMP3Q15836 100 aa6.95□□□□□ -1.3
LIG4-202ENST00000405925 TMEM158Q8WZ71 300 aa6.95□□□□□ -1.3
LIG4-202ENST00000405925 MIEN1Q9BRT3 115 aa6.95□□□□□ -1.3
LIG4-202ENST00000405925 C2orf88Q9BSF0 95 aa6.95□□□□□ -1.3
LIG4-202ENST00000405925 RHODO00212 210 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 PRSS2P07478 247 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 PSMB8P28062 276 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 FAM104BQ5XKR9 115 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 OR2K2Q8NGT1 345 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 IFI27L1Q96BM0 104 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 HIST1H2BLQ99880 126 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 DNAH14Q0VDD8 3507 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 A0A087WX48 190 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 AZU1P20160 251 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 CHCHD1Q96BP2 118 aaKnown RBP6.94□□□□□ -1.3
LIG4-202ENST00000405925 PYGO2Q9BRQ0 406 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 ZFAND3Q9H8U3 227 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 VCYO14598 125 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 TNFRSF6BO95407 300 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
LIG4-202ENST00000405925 DAD1P61803 113 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 SLAQ13239 276 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 MRAPQ8TCY5 172 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 TOMM7Q9P0U1 55 aa6.94□□□□□ -1.3
LIG4-202ENST00000405925 FLNAP21333 2647 aaKnown RBP6.94□□□□□ -1.3
LIG4-202ENST00000405925 IGKV3D-20A0A0C4DH25 116 aa6.93□□□□□ -1.3
LIG4-202ENST00000405925 SMIM27A0A1W2PRY6 76 aa6.93□□□□□ -1.3
LIG4-202ENST00000405925 F5H768 121 aa6.93□□□□□ -1.3
LIG4-202ENST00000405925 LAGE3Q14657 143 aa6.93□□□□□ -1.3
LIG4-202ENST00000405925 C1orf159Q96HA4 380 aa6.93□□□□□ -1.3
LIG4-202ENST00000405925 MRPL16Q9NX20 251 aaKnown RBP6.93□□□□□ -1.3
LIG4-202ENST00000405925 HIST3H2BBQ8N257 126 aa6.93□□□□□ -1.3
LIG4-202ENST00000405925 TRAV26-2A0A0B4J265 109 aa6.93□□□□□ -1.3
LIG4-202ENST00000405925 SCGB1C2P0DMR2 95 aa6.93□□□□□ -1.3
LIG4-202ENST00000405925 SLC25A34Q6PIV7 304 aa6.93□□□□□ -1.3
LIG4-202ENST00000405925 CELSR3Q9NYQ7 3312 aa6.93□□□□□ -1.3
LIG4-202ENST00000405925 FRYLO94915 3013 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 TRAV25A0A0B4J276 109 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 GAGE12JA6NER3 117 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 A8MWV9 139 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 GAGE1Q13065 139 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 GAGE4Q13068 117 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 GAGE5Q13069 117 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 GAGE13Q4V321 117 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 NDUFS6O75380 124 aaKnown RBP6.92□□□□□ -1.3
LIG4-202ENST00000405925 MRPL51Q4U2R6 128 aaKnown RBP6.92□□□□□ -1.3
LIG4-202ENST00000405925 MEIG1Q5JSS6 88 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 ITPR3Q14573 2671 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 A0A087X0K7 114 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 SNAI2O43623 268 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 TYMSP04818 313 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 C18orf65Q6ZTR6 163 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 NDUFA11Q86Y39 141 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 PIFOQ8TCI5 191 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 C14orf144Q96I85 54 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 UQCR10Q9UDW1 63 aa6.92□□□□□ -1.3
LIG4-202ENST00000405925 C5orf52A6NGY3 159 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms