RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 IGKV3-20P01619 116 aa15.55■□□□□ 0.08
TPM1-208ENST00000404484 S100A8P05109 93 aa15.55■□□□□ 0.08
TPM1-208ENST00000404484 HBBP68871 147 aa15.55■□□□□ 0.08
TPM1-208ENST00000404484 OXLD1Q5BKU9 147 aa15.55■□□□□ 0.08
TPM1-208ENST00000404484 FER1L6-AS1Q8NA97 138 aa15.55■□□□□ 0.08
TPM1-208ENST00000404484 SNURFLB1AK76 121 aa15.54■□□□□ 0.08
TPM1-208ENST00000404484 HLA-DQA1P01909 254 aa15.54■□□□□ 0.08
TPM1-208ENST00000404484 DEFA6Q01524 100 aa15.54■□□□□ 0.08
TPM1-208ENST00000404484 RIGQ13278 110 aa15.54■□□□□ 0.08
TPM1-208ENST00000404484 SAMD5Q5TGI4 173 aa15.54■□□□□ 0.08
TPM1-208ENST00000404484 AMTNQ6UX39 209 aa15.54■□□□□ 0.08
TPM1-208ENST00000404484 FRZBQ92765 325 aa15.54■□□□□ 0.08
TPM1-208ENST00000404484 IGKV3D-20A0A0C4DH25 116 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 A0A1B0GXF2 115 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 CTRLP40313 264 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 RAB4BP61018 213 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 BEAN1Q3B7T3 259 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 ZFP82Q8N141 532 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 TPPP3Q9BW30 176 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 C11orf21Q9P2W6 132 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 SORL1Q92673 2214 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 F2Z2F3 143 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 IGLC6P0CF74 106 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 FABP9Q0Z7S8 132 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 TMEM136Q6ZRR5 245 aa15.53■□□□□ 0.08
TPM1-208ENST00000404484 IGLL1P15814 213 aa15.52■□□□□ 0.07
TPM1-208ENST00000404484 NAGKQ9UJ70 344 aa15.52■□□□□ 0.07
TPM1-208ENST00000404484 PHOX2AO14813 284 aa15.51■□□□□ 0.07
TPM1-208ENST00000404484 SPINK13Q1W4C9 94 aa15.51■□□□□ 0.07
TPM1-208ENST00000404484 GFI1BQ5VTD9 330 aa15.51■□□□□ 0.07
TPM1-208ENST00000404484 LYZL1Q6UWQ5 148 aa15.51■□□□□ 0.07
TPM1-208ENST00000404484 STHQ8IWL8 128 aa15.51■□□□□ 0.07
TPM1-208ENST00000404484 KCNS1Q96KK3 526 aa15.51■□□□□ 0.07
TPM1-208ENST00000404484 MRPL18Q9H0U6 180 aaKnown RBP15.51■□□□□ 0.07
TPM1-208ENST00000404484 GRIFINA4D1Z8 144 aa15.5■□□□□ 0.07
TPM1-208ENST00000404484 M0R2Z0 102 aa15.5■□□□□ 0.07
TPM1-208ENST00000404484 FAM159AQ6UWV7 190 aa15.5■□□□□ 0.07
TPM1-208ENST00000404484 TRAV12-3A0A0B4J271 114 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 AMBPP02760 352 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 S100A6P06703 90 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 ARMS2P0C7Q2 107 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 CAMPP49913 170 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 KIR3DS1Q14943 382 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 ZNF124Q15973 351 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 HIST1H2BKO60814 126 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 HIST1H2BJP06899 126 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 FRMD6-AS1P0C7T7 363 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 TRGC1P0CF51 173 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 HIST1H2BOP23527 126 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 HIST1H2BBP33778 126 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 HIST1H2BDP58876 126 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 HIST1H2BCP62807 126 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 HIST2H2BEQ16778 126 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 ANXA2RQ3ZCQ2 193 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.49■□□□□ 0.07
TPM1-208ENST00000404484 KPRPQ5T749 579 aaPredicted RBP15.49■□□□□ 0.07
TPM1-208ENST00000404484 HIST1H2BHQ93079 126 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 HIST1H2BNQ99877 126 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 HIST1H2BMQ99879 126 aa15.49■□□□□ 0.07
TPM1-208ENST00000404484 ZNF324O75467 553 aaPredicted RBP15.48■□□□□ 0.07
TPM1-208ENST00000404484 MED14OSP0DP75 135 aa15.48■□□□□ 0.07
TPM1-208ENST00000404484 ASIPP42127 132 aa15.48■□□□□ 0.07
TPM1-208ENST00000404484 ZNF575Q86XF7 245 aa15.48■□□□□ 0.07
TPM1-208ENST00000404484 CNFNQ9BYD5 112 aa15.48■□□□□ 0.07
TPM1-208ENST00000404484 AGRNO00468 2067 aa15.47■□□□□ 0.07
TPM1-208ENST00000404484 APCSP02743 223 aa15.47■□□□□ 0.07
TPM1-208ENST00000404484 OR5AL1P0C617 328 aa15.47■□□□□ 0.07
TPM1-208ENST00000404484 DNLZQ5SXM8 178 aa15.47■□□□□ 0.07
TPM1-208ENST00000404484 Q6ZQT7 251 aa15.47■□□□□ 0.07
TPM1-208ENST00000404484 TRAV12-2A0A075B6T6 113 aa15.46■□□□□ 0.07
TPM1-208ENST00000404484 RBMY1BA6NDE4 496 aaKnown RBP15.46■□□□□ 0.07
TPM1-208ENST00000404484 RBMY1EA6NEQ0 496 aaKnown RBP15.46■□□□□ 0.07
TPM1-208ENST00000404484 RBMY1DP0C7P1 496 aaKnown RBP15.46■□□□□ 0.07
TPM1-208ENST00000404484 S100A4P26447 101 aaKnown RBP15.46■□□□□ 0.07
TPM1-208ENST00000404484 NUTF2P61970 127 aaKnown RBP15.46■□□□□ 0.07
TPM1-208ENST00000404484 TDRG1Q3Y452 100 aa15.46■□□□□ 0.07
TPM1-208ENST00000404484 MUC21Q5SSG8 566 aa15.46■□□□□ 0.07
TPM1-208ENST00000404484 TRPT1Q86TN4 253 aaKnown RBP15.46■□□□□ 0.07
TPM1-208ENST00000404484 GATD1Q8NB37 220 aa15.46■□□□□ 0.07
TPM1-208ENST00000404484 C20orf144Q9BQM9 153 aa15.46■□□□□ 0.07
TPM1-208ENST00000404484 SNAI2O43623 268 aa15.45■□□□□ 0.06
TPM1-208ENST00000404484 CD7P09564 240 aa15.45■□□□□ 0.06
TPM1-208ENST00000404484 CACNG7P62955 275 aa15.45■□□□□ 0.06
TPM1-208ENST00000404484 SSBP4Q9BWG4 385 aaPredicted RBP15.45■□□□□ 0.06
TPM1-208ENST00000404484 PRKDCP78527 4128 aaKnown RBP15.45■□□□□ 0.06
TPM1-208ENST00000404484 PRB2P02812 416 aaPredicted RBP15.45■□□□□ 0.06
TPM1-208ENST00000404484 GTSCR1Q86UQ5 136 aa15.45■□□□□ 0.06
TPM1-208ENST00000404484 DNAH3Q8TD57 4116 aa15.44■□□□□ 0.06
TPM1-208ENST00000404484 IGHV1OR15-1A0A075B7D0 117 aa15.44■□□□□ 0.06
TPM1-208ENST00000404484 C19orf73Q9NVV2 129 aa15.44■□□□□ 0.06
TPM1-208ENST00000404484 H3BVH4 76 aa15.43■□□□□ 0.06
TPM1-208ENST00000404484 WIPF1O43516 503 aa15.43■□□□□ 0.06
TPM1-208ENST00000404484 INSP01308 110 aa15.43■□□□□ 0.06
TPM1-208ENST00000404484 FXYD7P58549 80 aa15.43■□□□□ 0.06
TPM1-208ENST00000404484 TWIST1Q15672 202 aa15.43■□□□□ 0.06
TPM1-208ENST00000404484 CRXO43186 299 aaPredicted RBP15.42■□□□□ 0.06
TPM1-208ENST00000404484 ZNF493Q6ZR52 646 aa15.42■□□□□ 0.06
TPM1-208ENST00000404484 NTF3P20783 257 aa15.41■□□□□ 0.06
TPM1-208ENST00000404484 SLAQ13239 276 aa15.41■□□□□ 0.06
TPM1-208ENST00000404484 TRGV11A0A075B6L2 103 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms