RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 TM4SF20Q53R12 229 aa15.19■□□□□ 0.02
CCDC47-202ENST00000403162 NRACQ8N912 160 aa15.19■□□□□ 0.02
CCDC47-202ENST00000403162 PIMREGQ9BSJ6 248 aa15.19■□□□□ 0.02
CCDC47-202ENST00000403162 HIF1ANQ9NWT6 349 aa15.19■□□□□ 0.02
CCDC47-202ENST00000403162 PTPN13Q12923 2485 aa15.19■□□□□ 0.02
CCDC47-202ENST00000403162 TRBV25-1A0A075B6N4 114 aa15.19■□□□□ 0.02
CCDC47-202ENST00000403162 CCDC140Q96MF4 163 aa15.19■□□□□ 0.02
CCDC47-202ENST00000403162 TTTY13Q9BZ97 58 aa15.19■□□□□ 0.02
CCDC47-202ENST00000403162 SIRPDQ9H106 197 aa15.19■□□□□ 0.02
CCDC47-202ENST00000403162 FASNP49327 2511 aaKnown RBP15.19■□□□□ 0.02
CCDC47-202ENST00000403162 TRAV8-2A0A0B4J237 113 aa15.18■□□□□ 0.02
CCDC47-202ENST00000403162 ZFP36P26651 326 aaKnown RBP15.18■□□□□ 0.02
CCDC47-202ENST00000403162 ECSCRQ19T08 205 aa15.18■□□□□ 0.02
CCDC47-202ENST00000403162 TMEM78Q5T7P6 136 aa15.18■□□□□ 0.02
CCDC47-202ENST00000403162 ZC2HC1BQ5TFG8 222 aa15.18■□□□□ 0.02
CCDC47-202ENST00000403162 C10orf105Q8TEF2 133 aa15.18■□□□□ 0.02
CCDC47-202ENST00000403162 IGHV4-4A0A075B6R2 117 aa15.18■□□□□ 0.02
CCDC47-202ENST00000403162 ATP6V0E1O15342 81 aa15.18■□□□□ 0.02
CCDC47-202ENST00000403162 LAGE3Q14657 143 aa15.18■□□□□ 0.02
CCDC47-202ENST00000403162 GTSCR1Q86UQ5 136 aa15.18■□□□□ 0.02
CCDC47-202ENST00000403162 TM2D2Q9BX73 214 aa15.18■□□□□ 0.02
CCDC47-202ENST00000403162 NDUFS8O00217 210 aa15.17■□□□□ 0.02
CCDC47-202ENST00000403162 BEX4Q9NWD9 120 aaPredicted RBP15.17■□□□□ 0.02
CCDC47-202ENST00000403162 IGHV3-66A0A0C4DH42 116 aa15.17■□□□□ 0.02
CCDC47-202ENST00000403162 C9orf47Q6ZRZ4 202 aa15.17■□□□□ 0.02
CCDC47-202ENST00000403162 MYOZ3Q8TDC0 251 aa15.17■□□□□ 0.02
CCDC47-202ENST00000403162 PHLDA1Q8WV24 401 aaPredicted RBP15.17■□□□□ 0.02
CCDC47-202ENST00000403162 SELENOKQ9Y6D0 94 aa15.17■□□□□ 0.02
CCDC47-202ENST00000403162 DEFB113Q30KQ7 82 aa15.16■□□□□ 0.02
CCDC47-202ENST00000403162 CEND1Q8N111 149 aa15.16■□□□□ 0.02
CCDC47-202ENST00000403162 IGHV4-30-2A0A087WSY4 118 aa15.15■□□□□ 0.02
CCDC47-202ENST00000403162 CLEC19AQ6UXS0 136 aa15.15■□□□□ 0.02
CCDC47-202ENST00000403162 C8orf86Q6ZUL3 223 aa15.15■□□□□ 0.02
CCDC47-202ENST00000403162 AJUBAQ96IF1 538 aa15.15■□□□□ 0.02
CCDC47-202ENST00000403162 MRPL35Q9NZE8 188 aaKnown RBP15.15■□□□□ 0.02
CCDC47-202ENST00000403162 ABCA12Q86UK0 2595 aa15.15■□□□□ 0.02
CCDC47-202ENST00000403162 TRAV40A0A0B4J280 105 aa15.15■□□□□ 0.02
CCDC47-202ENST00000403162 DSCR9P59020 149 aa15.15■□□□□ 0.02
CCDC47-202ENST00000403162 EEF1AKMT3Q96AZ1 226 aa15.15■□□□□ 0.02
CCDC47-202ENST00000403162 METTL26Q96S19 204 aa15.15■□□□□ 0.02
CCDC47-202ENST00000403162 A0A087WX48 190 aa15.14■□□□□ 0.01
CCDC47-202ENST00000403162 TMEM160Q9NX00 188 aa15.14■□□□□ 0.01
CCDC47-202ENST00000403162 U3KQE9 123 aa15.14■□□□□ 0.01
CCDC47-202ENST00000403162 POLQO75417 2590 aa15.14■□□□□ 0.01
CCDC47-202ENST00000403162 TRBV7-1A0A0A6YYK4 115 aa15.14■□□□□ 0.01
CCDC47-202ENST00000403162 UBE2E1P51965 193 aa15.14■□□□□ 0.01
CCDC47-202ENST00000403162 LMO4P61968 165 aa15.14■□□□□ 0.01
CCDC47-202ENST00000403162 UFC1Q9Y3C8 167 aa15.14■□□□□ 0.01
CCDC47-202ENST00000403162 CSMD1Q96PZ7 3565 aa15.13■□□□□ 0.01
CCDC47-202ENST00000403162 TAL2Q16559 108 aa15.13■□□□□ 0.01
CCDC47-202ENST00000403162 TRAV26-2A0A0B4J265 109 aa15.12■□□□□ 0.01
CCDC47-202ENST00000403162 IGHV4-61A0A0C4DH41 118 aa15.12■□□□□ 0.01
CCDC47-202ENST00000403162 RIPPLY3P57055 190 aa15.12■□□□□ 0.01
CCDC47-202ENST00000403162 MRAP2Q96G30 205 aa15.12■□□□□ 0.01
CCDC47-202ENST00000403162 CSMD2Q7Z408 3487 aa15.12■□□□□ 0.01
CCDC47-202ENST00000403162 IGHV3OR16-13A0A075B7E8 117 aa15.12■□□□□ 0.01
CCDC47-202ENST00000403162 IGHV3-74A0A0B4J1X5 117 aa15.12■□□□□ 0.01
CCDC47-202ENST00000403162 PLNP26678 52 aa15.12■□□□□ 0.01
CCDC47-202ENST00000403162 SPANXN1Q5VSR9 72 aa15.12■□□□□ 0.01
CCDC47-202ENST00000403162 ANKRD17O75179 2603 aaKnown RBP15.12■□□□□ 0.01
CCDC47-202ENST00000403162 WNK2Q9Y3S1 2297 aa15.11■□□□□ 0.01
CCDC47-202ENST00000403162 K7ERJ3 54 aa15.11■□□□□ 0.01
CCDC47-202ENST00000403162 LRRC75A-AS1Q8N1F1 130 aa15.11■□□□□ 0.01
CCDC47-202ENST00000403162 NHP2Q9NX24 153 aaKnown RBP15.11■□□□□ 0.01
CCDC47-202ENST00000403162 APCP25054 2843 aa15.11■□□□□ 0.01
CCDC47-202ENST00000403162 NBPF19A0A087WUL8 3843 aa15.11■□□□□ 0.01
CCDC47-202ENST00000403162 G3V318 75 aa15.11■□□□□ 0.01
CCDC47-202ENST00000403162 LENEPQ9Y5L5 61 aa15.11■□□□□ 0.01
CCDC47-202ENST00000403162 TRAV12-1A0A0B4J245 112 aa15.1■□□□□ 0.01
CCDC47-202ENST00000403162 MAPKAPK5-AS1Q8N8E1 139 aa15.09■□□□□ 0.01
CCDC47-202ENST00000403162 SMIM2Q9BVW6 85 aa15.09■□□□□ 0.01
CCDC47-202ENST00000403162 ASH1LQ9NR48 2969 aaKnown RBP15.09■□□□□ 0.01
CCDC47-202ENST00000403162 IGHV3-49A0A0A0MS15 119 aa15.09■□□□□ 0.01
CCDC47-202ENST00000403162 ZNF207O43670 478 aaKnown RBP15.09■□□□□ 0.01
CCDC47-202ENST00000403162 SAA4P35542 130 aa15.09■□□□□ 0.01
CCDC47-202ENST00000403162 Q5PR19 223 aa15.09■□□□□ 0.01
CCDC47-202ENST00000403162 ATP6V0BQ99437 205 aa15.09■□□□□ 0.01
CCDC47-202ENST00000403162 LINC01548A6NM66 108 aa15.08■□□□□ 0.01
CCDC47-202ENST00000403162 E9PLD3 99 aa15.08■□□□□ 0.01
CCDC47-202ENST00000403162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.08■□□□□ 0.01
CCDC47-202ENST00000403162 SLC25A16P16260 332 aa15.08■□□□□ 0.01
CCDC47-202ENST00000403162 Q6ZQT7 251 aa15.08■□□□□ 0.01
CCDC47-202ENST00000403162 NAV2Q8IVL1 2488 aa15.08■□□□□ 0
CCDC47-202ENST00000403162 CENPVL3A0A0U1RRI6 287 aa15.08■□□□□ 0
CCDC47-202ENST00000403162 H3BVH4 76 aa15.08■□□□□ 0
CCDC47-202ENST00000403162 H7C1H1 209 aa15.07■□□□□ 0
CCDC47-202ENST00000403162 PRR9Q5T870 116 aa15.07■□□□□ 0
CCDC47-202ENST00000403162 C9orf139Q6ZV77 190 aa15.07■□□□□ 0
CCDC47-202ENST00000403162 C16orf92Q96LL3 132 aa15.07■□□□□ 0
CCDC47-202ENST00000403162 F8VRH5 84 aa15.07■□□□□ 0
CCDC47-202ENST00000403162 GLMPQ8WWB7 406 aa15.07■□□□□ 0
CCDC47-202ENST00000403162 IGLL5B9A064 214 aa15.06■□□□□ 0
CCDC47-202ENST00000403162 LINC01619G3V211 115 aa15.06■□□□□ 0
CCDC47-202ENST00000403162 ATP5G2Q06055 141 aa15.06■□□□□ 0
CCDC47-202ENST00000403162 ORMDL2Q53FV1 153 aa15.06■□□□□ 0
CCDC47-202ENST00000403162 C5orf56Q8N8D9 126 aa15.05■□□□□ 0
CCDC47-202ENST00000403162 HECTD1Q9ULT8 2610 aa15.05■□□□□ -0
CCDC47-202ENST00000403162 K7EMI3 77 aa15.05■□□□□ -0
CCDC47-202ENST00000403162 TOMM6Q96B49 74 aa15.05■□□□□ -0
CCDC47-202ENST00000403162 C12orf74Q32Q52 190 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms