RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 GNRH2O43555 120 aa13.08□□□□□ -0.32
TSC2-204ENST00000401874 C9orf153Q5TBE3 101 aa13.08□□□□□ -0.32
TSC2-204ENST00000401874 TRAV13-2A0A0B4J235 113 aa13.08□□□□□ -0.32
TSC2-204ENST00000401874 IGFBPL1Q8WX77 278 aa13.08□□□□□ -0.32
TSC2-204ENST00000401874 DKK4Q9UBT3 224 aa13.08□□□□□ -0.32
TSC2-204ENST00000401874 F8WEM9 126 aa13.07□□□□□ -0.32
TSC2-204ENST00000401874 CFHR3Q02985 330 aa13.07□□□□□ -0.32
TSC2-204ENST00000401874 DOCK9Q9BZ29 2069 aa13.07□□□□□ -0.32
TSC2-204ENST00000401874 CARD19Q96LW7 228 aa13.07□□□□□ -0.32
TSC2-204ENST00000401874 PFN2P35080 140 aa13.07□□□□□ -0.32
TSC2-204ENST00000401874 AMTNQ6UX39 209 aa13.07□□□□□ -0.32
TSC2-204ENST00000401874 CENPVL3A0A0U1RRI6 287 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 GAGE7O76087 117 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 GAGE12FP0CL80 117 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 GAGE12GP0CL81 117 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 GAGE12IP0CL82 117 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 TDRG1Q3Y452 100 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 CITED1Q99966 193 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 CCL25O15444 150 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 RITA1Q96K30 269 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 SPTBN1Q01082 2364 aaKnown RBP13.06□□□□□ -0.32
TSC2-204ENST00000401874 LINC00173Q6ZV60 143 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 IGHV7-81A0A0B4J1V7 117 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 IGLV2-23P01705 113 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 IGF2-ASQ6U949 168 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 Q6ZVH6 145 aa13.06□□□□□ -0.32
TSC2-204ENST00000401874 CFC1BP0CG36 223 aa13.05□□□□□ -0.32
TSC2-204ENST00000401874 CFC1P0CG37 223 aa13.05□□□□□ -0.32
TSC2-204ENST00000401874 IFITM1P13164 125 aa13.05□□□□□ -0.32
TSC2-204ENST00000401874 GATA1P15976 413 aaPredicted RBP13.05□□□□□ -0.32
TSC2-204ENST00000401874 GTSF1Q8WW33 167 aa13.05□□□□□ -0.32
TSC2-204ENST00000401874 F6UB75 175 aa13.05□□□□□ -0.32
TSC2-204ENST00000401874 GAGE6Q13070 117 aa13.05□□□□□ -0.32
TSC2-204ENST00000401874 PKDREJQ9NTG1 2253 aa13.05□□□□□ -0.32
TSC2-204ENST00000401874 WI2-2373I1.2A0A1W2PRP0 233 aa13.05□□□□□ -0.32
TSC2-204ENST00000401874 TRBV6-1A0A0K0K1D8 114 aa13.04□□□□□ -0.32
TSC2-204ENST00000401874 WT1P19544 449 aaPredicted RBP13.04□□□□□ -0.32
TSC2-204ENST00000401874 ANKRD39Q53RE8 183 aa13.04□□□□□ -0.32
TSC2-204ENST00000401874 KMT2EQ8IZD2 1858 aa13.04□□□□□ -0.32
TSC2-204ENST00000401874 CTSGP08311 255 aa13.04□□□□□ -0.32
TSC2-204ENST00000401874 DAD1P61803 113 aa13.04□□□□□ -0.32
TSC2-204ENST00000401874 CR1LQ2VPA4 569 aa13.04□□□□□ -0.32
TSC2-204ENST00000401874 ODF3L1Q8IXM7 274 aa13.04□□□□□ -0.32
TSC2-204ENST00000401874 ACACAQ13085 2346 aa13.03□□□□□ -0.32
TSC2-204ENST00000401874 MAPK1IP1LQ8NDC0 245 aa13.03□□□□□ -0.32
TSC2-204ENST00000401874 ZNF106Q9H2Y7 1883 aaKnown RBP13.03□□□□□ -0.32
TSC2-204ENST00000401874 IGLL5B9A064 214 aa13.03□□□□□ -0.32
TSC2-204ENST00000401874 UBE2DNLQ8IWF7 75 aa13.03□□□□□ -0.32
TSC2-204ENST00000401874 IGKV1OR2-108A0A075B7D4 117 aa13.02□□□□□ -0.33
TSC2-204ENST00000401874 ZNF561-AS1K7EIQ3 104 aa13.02□□□□□ -0.33
TSC2-204ENST00000401874 UBL5Q9BZL1 73 aa13.02□□□□□ -0.33
TSC2-204ENST00000401874 TEX22C9J3V5 150 aa13.02□□□□□ -0.33
TSC2-204ENST00000401874 P0C879 139 aa13.02□□□□□ -0.33
TSC2-204ENST00000401874 PRSS47A8MTI9 375 aa13.02□□□□□ -0.33
TSC2-204ENST00000401874 Q96MF0 132 aa13.02□□□□□ -0.33
TSC2-204ENST00000401874 POLEQ07864 2286 aa13.01□□□□□ -0.33
TSC2-204ENST00000401874 DIDO1Q9BTC0 2240 aaKnown RBP13.01□□□□□ -0.33
TSC2-204ENST00000401874 BUB3O43684 328 aa13.01□□□□□ -0.33
TSC2-204ENST00000401874 IGHG4P01861 327 aa13.01□□□□□ -0.33
TSC2-204ENST00000401874 GPR179Q6PRD1 2367 aa13.01□□□□□ -0.33
TSC2-204ENST00000401874 HIGD1BQ9P298 99 aa13.01□□□□□ -0.33
TSC2-204ENST00000401874 C16orf54Q6UWD8 224 aa13.01□□□□□ -0.33
TSC2-204ENST00000401874 F5H768 121 aa13.01□□□□□ -0.33
TSC2-204ENST00000401874 NTN5Q8WTR8 489 aaPredicted RBP13.01□□□□□ -0.33
TSC2-204ENST00000401874 CRYGCP07315 174 aa13□□□□□ -0.33
TSC2-204ENST00000401874 SUMO4Q6EEV6 95 aa13□□□□□ -0.33
TSC2-204ENST00000401874 RPL39LQ96EH5 51 aaKnown RBP13□□□□□ -0.33
TSC2-204ENST00000401874 MSRB1Q9NZV6 116 aa13□□□□□ -0.33
TSC2-204ENST00000401874 DOCK7Q96N67 2140 aa13□□□□□ -0.33
TSC2-204ENST00000401874 TRAV12-1A0A0B4J245 112 aa13□□□□□ -0.33
TSC2-204ENST00000401874 RNASE13Q5GAN3 156 aaKnown RBP13□□□□□ -0.33
TSC2-204ENST00000401874 SPRY4Q9C004 299 aa12.99□□□□□ -0.33
TSC2-204ENST00000401874 VPREB3Q9UKI3 123 aa12.99□□□□□ -0.33
TSC2-204ENST00000401874 CTRLP40313 264 aa12.99□□□□□ -0.33
TSC2-204ENST00000401874 GRNP28799 593 aaKnown RBP12.99□□□□□ -0.33
TSC2-204ENST00000401874 HOXD3P31249 432 aaPredicted RBP12.99□□□□□ -0.33
TSC2-204ENST00000401874 IGLV1-47P01700 117 aa12.98□□□□□ -0.33
TSC2-204ENST00000401874 NBL1P41271 181 aa12.98□□□□□ -0.33
TSC2-204ENST00000401874 ZFP2Q6ZN57 461 aa12.98□□□□□ -0.33
TSC2-204ENST00000401874 RNF152Q8N8N0 203 aa12.98□□□□□ -0.33
TSC2-204ENST00000401874 HERV-K104P63124 156 aa12.98□□□□□ -0.33
TSC2-204ENST00000401874 NXPH4O95158 308 aa12.98□□□□□ -0.33
TSC2-204ENST00000401874 APOC4P55056 127 aa12.98□□□□□ -0.33
TSC2-204ENST00000401874 RPL32P62910 135 aaKnown RBP12.98□□□□□ -0.33
TSC2-204ENST00000401874 C9orf47Q6ZRZ4 202 aa12.98□□□□□ -0.33
TSC2-204ENST00000401874 DEFB112Q30KQ8 113 aa12.97□□□□□ -0.33
TSC2-204ENST00000401874 SPTBN2O15020 2390 aa12.97□□□□□ -0.33
TSC2-204ENST00000401874 Q8N9W7 124 aa12.97□□□□□ -0.33
TSC2-204ENST00000401874 U3KQE9 123 aa12.97□□□□□ -0.33
TSC2-204ENST00000401874 C19orf71A6NCJ1 209 aa12.97□□□□□ -0.33
TSC2-204ENST00000401874 ANKRD29Q8N6D5 301 aa12.97□□□□□ -0.33
TSC2-204ENST00000401874 SHANK1Q9Y566 2161 aa12.97□□□□□ -0.33
TSC2-204ENST00000401874 CRLF1O75462 422 aa12.96□□□□□ -0.33
TSC2-204ENST00000401874 MED14OSP0DP75 135 aa12.96□□□□□ -0.33
TSC2-204ENST00000401874 PSCAO43653 123 aa12.96□□□□□ -0.33
TSC2-204ENST00000401874 CDK2AP2O75956 126 aa12.96□□□□□ -0.33
TSC2-204ENST00000401874 C15orf53Q8NAA6 179 aa12.96□□□□□ -0.33
TSC2-204ENST00000401874 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.96□□□□□ -0.33
TSC2-204ENST00000401874 IGKV2-29A2NJV5 120 aaPredicted RBP12.96□□□□□ -0.33
TSC2-204ENST00000401874 SLC25A29Q8N8R3 303 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 339.2 ms