RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 LINC00643Q86TS7 51 aa10.74□□□□□ -0.69
DDX3X-201ENST00000399959 TRAV12-2A0A075B6T6 113 aa10.73□□□□□ -0.69
DDX3X-201ENST00000399959 UQCRQO14949 82 aa10.73□□□□□ -0.69
DDX3X-201ENST00000399959 FAM167A-AS1Q96KT0 104 aa10.73□□□□□ -0.69
DDX3X-201ENST00000399959 APC2O95996 2303 aa10.73□□□□□ -0.69
DDX3X-201ENST00000399959 H0YGX0 51 aa10.73□□□□□ -0.69
DDX3X-201ENST00000399959 PATE2Q6UY27 113 aa10.73□□□□□ -0.69
DDX3X-201ENST00000399959 NDUFA11Q86Y39 141 aa10.73□□□□□ -0.69
DDX3X-201ENST00000399959 IGFBPL1Q8WX77 278 aa10.73□□□□□ -0.69
DDX3X-201ENST00000399959 CLUHP3Q96NS8 147 aa10.73□□□□□ -0.69
DDX3X-201ENST00000399959 COL8A2P25067 703 aa10.72□□□□□ -0.69
DDX3X-201ENST00000399959 ZFP2Q6ZN57 461 aa10.72□□□□□ -0.69
DDX3X-201ENST00000399959 TP73-AS1Q9UF72 201 aa10.72□□□□□ -0.69
DDX3X-201ENST00000399959 ZSWIM8A7E2V4 1837 aa10.72□□□□□ -0.69
DDX3X-201ENST00000399959 MBD3L4A6NDZ8 208 aaPredicted RBP10.72□□□□□ -0.69
DDX3X-201ENST00000399959 MBD3L3A6NE82 208 aaPredicted RBP10.72□□□□□ -0.69
DDX3X-201ENST00000399959 MBD3L5A6NJ08 208 aaPredicted RBP10.72□□□□□ -0.69
DDX3X-201ENST00000399959 DIAPH2-AS1Q14236 149 aa10.72□□□□□ -0.69
DDX3X-201ENST00000399959 MBD3L2Q8NHZ7 208 aaPredicted RBP10.72□□□□□ -0.69
DDX3X-201ENST00000399959 BAALCQ8WXS3 180 aa10.72□□□□□ -0.69
DDX3X-201ENST00000399959 CLEC2BQ92478 149 aa10.72□□□□□ -0.69
DDX3X-201ENST00000399959 GNRH2O43555 120 aa10.72□□□□□ -0.69
DDX3X-201ENST00000399959 CD59P13987 128 aa10.72□□□□□ -0.69
DDX3X-201ENST00000399959 PRB1P04280 392 aa10.71□□□□□ -0.69
DDX3X-201ENST00000399959 BRD3OSQ6XYD6 125 aa10.71□□□□□ -0.69
DDX3X-201ENST00000399959 Q8N1Y9 231 aa10.71□□□□□ -0.69
DDX3X-201ENST00000399959 TOMM6Q96B49 74 aa10.71□□□□□ -0.69
DDX3X-201ENST00000399959 hADV29S1A0JD25 119 aa10.71□□□□□ -0.69
DDX3X-201ENST00000399959 SAA4P35542 130 aa10.71□□□□□ -0.69
DDX3X-201ENST00000399959 MRPL53Q96EL3 112 aaKnown RBP10.71□□□□□ -0.69
DDX3X-201ENST00000399959 KMT2EQ8IZD2 1858 aa10.71□□□□□ -0.69
DDX3X-201ENST00000399959 ABCA7Q8IZY2 2146 aa10.71□□□□□ -0.69
DDX3X-201ENST00000399959 NDUFA4O00483 81 aa10.71□□□□□ -0.69
DDX3X-201ENST00000399959 A0A0J9YXV3 536 aa10.71□□□□□ -0.7
DDX3X-201ENST00000399959 RPL35AP18077 110 aaKnown RBP10.71□□□□□ -0.7
DDX3X-201ENST00000399959 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.7
DDX3X-201ENST00000399959 TNRC6AQ8NDV7 1962 aaKnown RBP10.71□□□□□ -0.7
DDX3X-201ENST00000399959 G3V318 75 aa10.71□□□□□ -0.7
DDX3X-201ENST00000399959 LENEPQ9Y5L5 61 aa10.71□□□□□ -0.7
DDX3X-201ENST00000399959 LOXP28300 417 aaPredicted RBP10.7□□□□□ -0.7
DDX3X-201ENST00000399959 SLC25A29Q8N8R3 303 aa10.7□□□□□ -0.7
DDX3X-201ENST00000399959 YLPM1P49750 1951 aaKnown RBP10.7□□□□□ -0.7
DDX3X-201ENST00000399959 A0A1B0GXF2 115 aa10.7□□□□□ -0.7
DDX3X-201ENST00000399959 PROK2Q9HC23 129 aa10.7□□□□□ -0.7
DDX3X-201ENST00000399959 SPTA1P02549 2419 aa10.69□□□□□ -0.7
DDX3X-201ENST00000399959 MYO7BQ6PIF6 2116 aa10.69□□□□□ -0.7
DDX3X-201ENST00000399959 Q6ZSR3 168 aa10.69□□□□□ -0.7
DDX3X-201ENST00000399959 PLXNA4Q9HCM2 1894 aa10.69□□□□□ -0.7
DDX3X-201ENST00000399959 C11orf86A6NJI1 115 aa10.69□□□□□ -0.7
DDX3X-201ENST00000399959 LTBRP36941 435 aa10.69□□□□□ -0.7
DDX3X-201ENST00000399959 TP53TG3Q9ULZ0 132 aa10.69□□□□□ -0.7
DDX3X-201ENST00000399959 PI4KAP42356 2102 aa10.68□□□□□ -0.7
DDX3X-201ENST00000399959 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.68□□□□□ -0.7
DDX3X-201ENST00000399959 IGKV2-29A2NJV5 120 aaPredicted RBP10.68□□□□□ -0.7
DDX3X-201ENST00000399959 C3orf22Q8N5N4 141 aa10.68□□□□□ -0.7
DDX3X-201ENST00000399959 TMEM105Q8N8V8 129 aa10.68□□□□□ -0.7
DDX3X-201ENST00000399959 TM2D2Q9BX73 214 aa10.68□□□□□ -0.7
DDX3X-201ENST00000399959 C11orf44Q8N8P7 122 aa10.68□□□□□ -0.7
DDX3X-201ENST00000399959 XCL2Q9UBD3 114 aa10.68□□□□□ -0.7
DDX3X-201ENST00000399959 SPRY2O43597 315 aa10.68□□□□□ -0.7
DDX3X-201ENST00000399959 DEFB130BP0DP73 79 aa10.68□□□□□ -0.7
DDX3X-201ENST00000399959 DEFB130AP0DP74 79 aa10.68□□□□□ -0.7
DDX3X-201ENST00000399959 PLXND1Q9Y4D7 1925 aa10.68□□□□□ -0.7
DDX3X-201ENST00000399959 C19orf71A6NCJ1 209 aa10.68□□□□□ -0.7
DDX3X-201ENST00000399959 FGF23Q9GZV9 251 aaPredicted RBP10.68□□□□□ -0.7
DDX3X-201ENST00000399959 ZNF561-AS1K7EIQ3 104 aa10.67□□□□□ -0.7
DDX3X-201ENST00000399959 LOXL1Q08397 574 aaPredicted RBP10.67□□□□□ -0.7
DDX3X-201ENST00000399959 SPATA25Q9BR10 227 aa10.67□□□□□ -0.7
DDX3X-201ENST00000399959 SND1-IT1Q9HBX3 110 aa10.67□□□□□ -0.7
DDX3X-201ENST00000399959 CFHR3Q02985 330 aa10.66□□□□□ -0.7
DDX3X-201ENST00000399959 INTS1Q8N201 2190 aaKnown RBP10.66□□□□□ -0.7
DDX3X-201ENST00000399959 A0A0G2JNJ9 132 aa10.66□□□□□ -0.7
DDX3X-201ENST00000399959 GDF5OSQ5U4N7 250 aa10.66□□□□□ -0.7
DDX3X-201ENST00000399959 Q9UFV3 132 aa10.66□□□□□ -0.7
DDX3X-201ENST00000399959 NKAPP1Q8N9T2 125 aa10.66□□□□□ -0.7
DDX3X-201ENST00000399959 WFDC9Q8NEX5 89 aa10.66□□□□□ -0.7
DDX3X-201ENST00000399959 TEX49A0A1B0GTD5 131 aa10.65□□□□□ -0.7
DDX3X-201ENST00000399959 IGLC6P0CF74 106 aa10.65□□□□□ -0.7
DDX3X-201ENST00000399959 UBE2E1P51965 193 aa10.65□□□□□ -0.7
DDX3X-201ENST00000399959 DAND5Q8N907 189 aa10.65□□□□□ -0.7
DDX3X-201ENST00000399959 ZNF503Q96F45 646 aa10.65□□□□□ -0.7
DDX3X-201ENST00000399959 TIMM17AQ99595 171 aa10.65□□□□□ -0.7
DDX3X-201ENST00000399959 RPL39P62891 51 aaKnown RBP10.65□□□□□ -0.7
DDX3X-201ENST00000399959 JMJD7-PLA2G4BH0Y9G9 81 aa10.65□□□□□ -0.7
DDX3X-201ENST00000399959 TMEM61Q8N0U2 210 aa10.65□□□□□ -0.7
DDX3X-201ENST00000399959 TRBV6-1A0A0K0K1D8 114 aa10.65□□□□□ -0.71
DDX3X-201ENST00000399959 E7EQL1 145 aa10.65□□□□□ -0.71
DDX3X-201ENST00000399959 ODF3L1Q8IXM7 274 aa10.65□□□□□ -0.71
DDX3X-201ENST00000399959 C8orf31Q8N9H6 132 aa10.65□□□□□ -0.71
DDX3X-201ENST00000399959 IGLV2-8P01709 118 aa10.64□□□□□ -0.71
DDX3X-201ENST00000399959 LY6HO94772 140 aa10.64□□□□□ -0.71
DDX3X-201ENST00000399959 IGLV3-9A0A075B6K5 115 aa10.64□□□□□ -0.71
DDX3X-201ENST00000399959 IGLV2-14P01704 120 aa10.64□□□□□ -0.71
DDX3X-201ENST00000399959 C11orf53Q8IXP5 236 aa10.64□□□□□ -0.71
DDX3X-201ENST00000399959 IGKV1OR2-108A0A075B7D4 117 aa10.63□□□□□ -0.71
DDX3X-201ENST00000399959 IGHV7-4-1A0A0J9YVY3 117 aa10.63□□□□□ -0.71
DDX3X-201ENST00000399959 I3L2K1 104 aa10.63□□□□□ -0.71
DDX3X-201ENST00000399959 DAD1P61803 113 aa10.63□□□□□ -0.71
DDX3X-201ENST00000399959 V9GYY9 64 aa10.63□□□□□ -0.71
DDX3X-201ENST00000399959 KRTAP27-1Q3LI81 207 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms