RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 CSPG4Q6UVK1 2322 aa10.57□□□□□ -0.72
COL6A2-203ENST00000397763 M0R381 172 aa10.57□□□□□ -0.72
COL6A2-203ENST00000397763 SPANXN1Q5VSR9 72 aa10.57□□□□□ -0.72
COL6A2-203ENST00000397763 GLMPQ8WWB7 406 aa10.57□□□□□ -0.72
COL6A2-203ENST00000397763 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.57□□□□□ -0.72
COL6A2-203ENST00000397763 MYOZ3Q8TDC0 251 aa10.57□□□□□ -0.72
COL6A2-203ENST00000397763 ZNF418Q8TF45 676 aaPredicted RBP10.57□□□□□ -0.72
COL6A2-203ENST00000397763 LOC107984156A0A0G2JMH3 177 aa10.56□□□□□ -0.72
COL6A2-203ENST00000397763 E9PLD3 99 aa10.56□□□□□ -0.72
COL6A2-203ENST00000397763 PRTN3P24158 256 aa10.56□□□□□ -0.72
COL6A2-203ENST00000397763 ARL17AQ8IVW1 177 aa10.56□□□□□ -0.72
COL6A2-203ENST00000397763 TIMD4Q96H15 378 aa10.56□□□□□ -0.72
COL6A2-203ENST00000397763 HIF1ANQ9NWT6 349 aa10.56□□□□□ -0.72
COL6A2-203ENST00000397763 CELSR2Q9HCU4 2923 aa10.56□□□□□ -0.72
COL6A2-203ENST00000397763 BUB3O43684 328 aa10.56□□□□□ -0.72
COL6A2-203ENST00000397763 SRSF8Q9BRL6 282 aaKnown RBP10.56□□□□□ -0.72
COL6A2-203ENST00000397763 F8W1H4 67 aa10.56□□□□□ -0.72
COL6A2-203ENST00000397763 APOMO95445 188 aa10.56□□□□□ -0.72
COL6A2-203ENST00000397763 PRR9Q5T870 116 aa10.56□□□□□ -0.72
COL6A2-203ENST00000397763 IGF2-ASQ6U949 168 aa10.56□□□□□ -0.72
COL6A2-203ENST00000397763 TRAV26-1A0A087WT03 109 aa10.55□□□□□ -0.72
COL6A2-203ENST00000397763 EMP1P54849 157 aa10.55□□□□□ -0.72
COL6A2-203ENST00000397763 NXT2Q9NPJ8 142 aaKnown RBP10.55□□□□□ -0.72
COL6A2-203ENST00000397763 MSRB2Q9Y3D2 182 aa10.55□□□□□ -0.72
COL6A2-203ENST00000397763 ODF3BA8MYP8 253 aa10.55□□□□□ -0.72
COL6A2-203ENST00000397763 Q8N9W7 124 aa10.55□□□□□ -0.72
COL6A2-203ENST00000397763 MRPL16Q9NX20 251 aaKnown RBP10.54□□□□□ -0.72
COL6A2-203ENST00000397763 HIGD1BQ9P298 99 aa10.54□□□□□ -0.72
COL6A2-203ENST00000397763 TMEM78Q5T7P6 136 aa10.54□□□□□ -0.72
COL6A2-203ENST00000397763 SYT8Q8NBV8 401 aa10.54□□□□□ -0.72
COL6A2-203ENST00000397763 PTH2Q96A98 100 aa10.54□□□□□ -0.72
COL6A2-203ENST00000397763 CCDC140Q96MF4 163 aa10.54□□□□□ -0.72
COL6A2-203ENST00000397763 TM2D2Q9BX73 214 aa10.54□□□□□ -0.72
COL6A2-203ENST00000397763 PGPEP1Q9NXJ5 209 aa10.54□□□□□ -0.72
COL6A2-203ENST00000397763 TRAV8-2A0A0B4J237 113 aa10.53□□□□□ -0.72
COL6A2-203ENST00000397763 CLPSL1A2RUU4 121 aa10.53□□□□□ -0.72
COL6A2-203ENST00000397763 RPL11P62913 178 aaKnown RBP10.53□□□□□ -0.72
COL6A2-203ENST00000397763 RPL39LQ96EH5 51 aaKnown RBP10.53□□□□□ -0.72
COL6A2-203ENST00000397763 ZFAND3Q9H8U3 227 aa10.53□□□□□ -0.72
COL6A2-203ENST00000397763 F6UB75 175 aa10.53□□□□□ -0.72
COL6A2-203ENST00000397763 SCGB1D4Q6XE38 83 aa10.53□□□□□ -0.72
COL6A2-203ENST00000397763 C8orf86Q6ZUL3 223 aa10.53□□□□□ -0.72
COL6A2-203ENST00000397763 PSMG3-AS1Q96PY0 264 aa10.53□□□□□ -0.72
COL6A2-203ENST00000397763 VKORC1Q9BQB6 163 aa10.53□□□□□ -0.72
COL6A2-203ENST00000397763 A0A1W2PPR1 153 aa10.52□□□□□ -0.72
COL6A2-203ENST00000397763 OR11H12B2RN74 326 aa10.52□□□□□ -0.72
COL6A2-203ENST00000397763 ATP5LO75964 103 aa10.52□□□□□ -0.72
COL6A2-203ENST00000397763 PSMB2P49721 201 aa10.52□□□□□ -0.72
COL6A2-203ENST00000397763 TCF15Q12870 199 aa10.52□□□□□ -0.72
COL6A2-203ENST00000397763 C14orf178Q8N769 122 aaPredicted RBP10.52□□□□□ -0.72
COL6A2-203ENST00000397763 Q8N8P6 123 aa10.52□□□□□ -0.72
COL6A2-203ENST00000397763 OR11H1Q8NG94 326 aa10.52□□□□□ -0.72
COL6A2-203ENST00000397763 OR11H2Q8NH07 326 aa10.52□□□□□ -0.72
COL6A2-203ENST00000397763 ZNF502Q8TBZ5 544 aa10.52□□□□□ -0.72
COL6A2-203ENST00000397763 IGLV2-18A0A075B6J9 118 aa10.52□□□□□ -0.73
COL6A2-203ENST00000397763 IGHV7-4-1A0A0J9YVY3 117 aa10.52□□□□□ -0.73
COL6A2-203ENST00000397763 MGPP08493 103 aa10.52□□□□□ -0.73
COL6A2-203ENST00000397763 SRD5A1P18405 259 aa10.52□□□□□ -0.73
COL6A2-203ENST00000397763 LAGE3Q14657 143 aa10.52□□□□□ -0.73
COL6A2-203ENST00000397763 RRN3P1Q2M238 152 aa10.52□□□□□ -0.73
COL6A2-203ENST00000397763 LINC01559Q495D7 138 aa10.52□□□□□ -0.73
COL6A2-203ENST00000397763 NRACQ8N912 160 aa10.52□□□□□ -0.73
COL6A2-203ENST00000397763 C16orf92Q96LL3 132 aa10.51□□□□□ -0.73
COL6A2-203ENST00000397763 GEMIN7Q9H840 131 aaKnown RBP10.51□□□□□ -0.73
COL6A2-203ENST00000397763 ZMAT4Q9H898 229 aa10.51□□□□□ -0.73
COL6A2-203ENST00000397763 TRBV12-3P01733 135 aa10.51□□□□□ -0.73
COL6A2-203ENST00000397763 SAA4P35542 130 aa10.51□□□□□ -0.73
COL6A2-203ENST00000397763 SRSF9Q13242 221 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL6A2-203ENST00000397763 C20orf173Q96LM9 149 aa10.51□□□□□ -0.73
COL6A2-203ENST00000397763 CENPEQ02224 2701 aa10.51□□□□□ -0.73
COL6A2-203ENST00000397763 CSMD2Q7Z408 3487 aa10.5□□□□□ -0.73
COL6A2-203ENST00000397763 IGHV3-11P01762 117 aa10.5□□□□□ -0.73
COL6A2-203ENST00000397763 Q8N6K4 173 aa10.5□□□□□ -0.73
COL6A2-203ENST00000397763 LINC01549A6NIU2 74 aa10.5□□□□□ -0.73
COL6A2-203ENST00000397763 HLA-DRB4P13762 266 aa10.5□□□□□ -0.73
COL6A2-203ENST00000397763 CRYBA4P53673 196 aa10.5□□□□□ -0.73
COL6A2-203ENST00000397763 HLA-DRB4X5D2U9 266 aa10.5□□□□□ -0.73
COL6A2-203ENST00000397763 SPINK8P0C7L1 97 aa10.49□□□□□ -0.73
COL6A2-203ENST00000397763 COX8CQ7Z4L0 72 aa10.49□□□□□ -0.73
COL6A2-203ENST00000397763 HOXA3O43365 443 aaPredicted RBP10.49□□□□□ -0.73
COL6A2-203ENST00000397763 S100A4P26447 101 aaKnown RBP10.49□□□□□ -0.73
COL6A2-203ENST00000397763 SPATA25Q9BR10 227 aa10.49□□□□□ -0.73
COL6A2-203ENST00000397763 CNFNQ9BYD5 112 aa10.49□□□□□ -0.73
COL6A2-203ENST00000397763 M0R1W7 72 aa10.49□□□□□ -0.73
COL6A2-203ENST00000397763 MT-ATP8P03928 68 aa10.49□□□□□ -0.73
COL6A2-203ENST00000397763 SCGB1A1P11684 91 aa10.49□□□□□ -0.73
COL6A2-203ENST00000397763 UNQ9165/PRO28630Q6UXU0 137 aa10.49□□□□□ -0.73
COL6A2-203ENST00000397763 ZFP2Q6ZN57 461 aa10.49□□□□□ -0.73
COL6A2-203ENST00000397763 UBTD1Q9HAC8 227 aa10.49□□□□□ -0.73
COL6A2-203ENST00000397763 GNRH2O43555 120 aa10.48□□□□□ -0.73
COL6A2-203ENST00000397763 KLHL30-AS1Q8NEE0 82 aa10.48□□□□□ -0.73
COL6A2-203ENST00000397763 ZNF48Q96MX3 618 aaPredicted RBP10.48□□□□□ -0.73
COL6A2-203ENST00000397763 SCGB3A1Q96QR1 104 aa10.48□□□□□ -0.73
COL6A2-203ENST00000397763 METTL26Q96S19 204 aa10.48□□□□□ -0.73
COL6A2-203ENST00000397763 RAXQ9Y2V3 346 aa10.48□□□□□ -0.73
COL6A2-203ENST00000397763 A0A087WX48 190 aa10.48□□□□□ -0.73
COL6A2-203ENST00000397763 SCGB2A1O75556 95 aa10.48□□□□□ -0.73
COL6A2-203ENST00000397763 BRD3OSQ6XYD6 125 aa10.48□□□□□ -0.73
COL6A2-203ENST00000397763 SMPXQ9UHP9 88 aa10.48□□□□□ -0.73
COL6A2-203ENST00000397763 UTP20O75691 2785 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 261.2 ms