RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 MINOS1-NBL1R4GNA1 71 aa11.33□□□□□ -0.6
CCNF-202ENST00000397066 MYMXA0A1B0GTQ4 84 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 ZNF815PA8K554 130 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 E9PLD3 99 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 TAL2Q16559 108 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 GLMPQ8WWB7 406 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 PGPEP1Q9NXJ5 209 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 OOSP1A8MZH6 123 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 CIDEAO60543 219 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 TMEM238LA0A1B0GVL6 79 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 A6NJY4 79 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 Q8N9W7 124 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 F5H697 171 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 APOMO95445 188 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 ASIPP42127 132 aa11.32□□□□□ -0.6
CCNF-202ENST00000397066 PSMB2P49721 201 aa11.31□□□□□ -0.6
CCNF-202ENST00000397066 SUMO2P61956 95 aaKnown RBP11.31□□□□□ -0.6
CCNF-202ENST00000397066 ZNF418Q8TF45 676 aaPredicted RBP11.31□□□□□ -0.6
CCNF-202ENST00000397066 RNASE4P34096 147 aaKnown RBP11.31□□□□□ -0.6
CCNF-202ENST00000397066 RRN3P1Q2M238 152 aa11.31□□□□□ -0.6
CCNF-202ENST00000397066 CEP295Q9C0D2 2601 aa11.31□□□□□ -0.6
CCNF-202ENST00000397066 NRACQ8N912 160 aa11.31□□□□□ -0.6
CCNF-202ENST00000397066 MRAP2Q96G30 205 aa11.31□□□□□ -0.6
CCNF-202ENST00000397066 MSRB2Q9Y3D2 182 aa11.3□□□□□ -0.6
CCNF-202ENST00000397066 IGHV3OR16-10A0A075B7F0 116 aa11.3□□□□□ -0.6
CCNF-202ENST00000397066 HLA-DRB4P13762 266 aa11.3□□□□□ -0.6
CCNF-202ENST00000397066 ZFAND3Q9H8U3 227 aa11.3□□□□□ -0.6
CCNF-202ENST00000397066 HLA-DRB4X5D2U9 266 aa11.3□□□□□ -0.6
CCNF-202ENST00000397066 EMP1P54849 157 aa11.3□□□□□ -0.6
CCNF-202ENST00000397066 C2orf66Q6UXQ4 117 aa11.3□□□□□ -0.6
CCNF-202ENST00000397066 TMEM219Q86XT9 240 aa11.3□□□□□ -0.6
CCNF-202ENST00000397066 SPANXB1Q9NS25 103 aaPredicted RBP11.3□□□□□ -0.6
CCNF-202ENST00000397066 COL6A6A6NMZ7 2263 aa11.3□□□□□ -0.6
CCNF-202ENST00000397066 RPL39LQ96EH5 51 aaKnown RBP11.29□□□□□ -0.6
CCNF-202ENST00000397066 SCGB1C2P0DMR2 95 aa11.29□□□□□ -0.6
CCNF-202ENST00000397066 PHLDA1Q8WV24 401 aaPredicted RBP11.29□□□□□ -0.6
CCNF-202ENST00000397066 PRADC1Q9BSG0 188 aa11.29□□□□□ -0.6
CCNF-202ENST00000397066 IGLV2-18A0A075B6J9 118 aa11.29□□□□□ -0.6
CCNF-202ENST00000397066 DPH3P1Q9H4G8 78 aa11.29□□□□□ -0.6
CCNF-202ENST00000397066 TRAV21A0A0B4J279 112 aa11.29□□□□□ -0.6
CCNF-202ENST00000397066 A0A1B0GV72 72 aa11.29□□□□□ -0.6
CCNF-202ENST00000397066 NDUFS8O00217 210 aa11.29□□□□□ -0.6
CCNF-202ENST00000397066 ZFP36P26651 326 aaKnown RBP11.29□□□□□ -0.6
CCNF-202ENST00000397066 SAA4P35542 130 aa11.29□□□□□ -0.6
CCNF-202ENST00000397066 AKAP13Q12802 2813 aa11.28□□□□□ -0.6
CCNF-202ENST00000397066 DMXL1Q9Y485 3027 aa11.28□□□□□ -0.6
CCNF-202ENST00000397066 IGHV7-4-1A0A0J9YVY3 117 aa11.28□□□□□ -0.6
CCNF-202ENST00000397066 LINC01548A6NM66 108 aa11.28□□□□□ -0.6
CCNF-202ENST00000397066 HERVK_113P61574 105 aa11.28□□□□□ -0.6
CCNF-202ENST00000397066 CCDC140Q96MF4 163 aa11.28□□□□□ -0.6
CCNF-202ENST00000397066 SPAG8Q99932 426 aaPredicted RBP11.28□□□□□ -0.6
CCNF-202ENST00000397066 TGFAP01135 160 aa11.28□□□□□ -0.6
CCNF-202ENST00000397066 IGF1P05019 195 aa11.28□□□□□ -0.6
CCNF-202ENST00000397066 SLC25A16P16260 332 aa11.28□□□□□ -0.6
CCNF-202ENST00000397066 AGRNO00468 2067 aa11.28□□□□□ -0.6
CCNF-202ENST00000397066 TRBV7-1A0A0A6YYK4 115 aa11.27□□□□□ -0.6
CCNF-202ENST00000397066 TRAV8-2A0A0B4J237 113 aa11.27□□□□□ -0.6
CCNF-202ENST00000397066 LINC01546A6NGU7 62 aa11.27□□□□□ -0.6
CCNF-202ENST00000397066 DEFB1P60022 68 aa11.27□□□□□ -0.6
CCNF-202ENST00000397066 LINC01549A6NIU2 74 aa11.27□□□□□ -0.61
CCNF-202ENST00000397066 Q8N6K4 173 aa11.27□□□□□ -0.61
CCNF-202ENST00000397066 ZNF575Q86XF7 245 aa11.27□□□□□ -0.61
CCNF-202ENST00000397066 UBTD1Q9HAC8 227 aa11.26□□□□□ -0.61
CCNF-202ENST00000397066 PRSS29PA6NIE9 313 aa11.26□□□□□ -0.61
CCNF-202ENST00000397066 C9orf47Q6ZRZ4 202 aa11.26□□□□□ -0.61
CCNF-202ENST00000397066 SPOCK3Q9BQ16 436 aa11.26□□□□□ -0.61
CCNF-202ENST00000397066 IGHV3-11P01762 117 aa11.26□□□□□ -0.61
CCNF-202ENST00000397066 TMEM170BQ5T4T1 132 aa11.26□□□□□ -0.61
CCNF-202ENST00000397066 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
CCNF-202ENST00000397066 CLPSL1A2RUU4 121 aa11.26□□□□□ -0.61
CCNF-202ENST00000397066 ANXA2RQ3ZCQ2 193 aa11.26□□□□□ -0.61
CCNF-202ENST00000397066 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
CCNF-202ENST00000397066 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
CCNF-202ENST00000397066 DLX4Q92988 240 aaPredicted RBP11.25□□□□□ -0.61
CCNF-202ENST00000397066 LINC00477Q96M19 166 aa11.25□□□□□ -0.61
CCNF-202ENST00000397066 LGALS1P09382 135 aaKnown RBP11.25□□□□□ -0.61
CCNF-202ENST00000397066 PRR9Q5T870 116 aa11.25□□□□□ -0.61
CCNF-202ENST00000397066 LYRM7Q5U5X0 104 aa11.25□□□□□ -0.61
CCNF-202ENST00000397066 CLEC2AQ6UVW9 174 aa11.25□□□□□ -0.61
CCNF-202ENST00000397066 KLHL30-AS1Q8NEE0 82 aa11.25□□□□□ -0.61
CCNF-202ENST00000397066 WFDC12Q8WWY7 111 aa11.25□□□□□ -0.61
CCNF-202ENST00000397066 SPTAN1Q13813 2472 aaKnown RBP11.25□□□□□ -0.61
CCNF-202ENST00000397066 TOMM6Q96B49 74 aa11.24□□□□□ -0.61
CCNF-202ENST00000397066 TRAV41A0A0B4J266 112 aa11.24□□□□□ -0.61
CCNF-202ENST00000397066 EBI3Q14213 229 aa11.24□□□□□ -0.61
CCNF-202ENST00000397066 MRPL53Q96EL3 112 aaKnown RBP11.24□□□□□ -0.61
CCNF-202ENST00000397066 LRBAP50851 2863 aa11.24□□□□□ -0.61
CCNF-202ENST00000397066 GNRH2O43555 120 aa11.24□□□□□ -0.61
CCNF-202ENST00000397066 INSL3P51460 131 aa11.24□□□□□ -0.61
CCNF-202ENST00000397066 UBE2E1P51965 193 aa11.24□□□□□ -0.61
CCNF-202ENST00000397066 RASL10AQ92737 203 aa11.24□□□□□ -0.61
CCNF-202ENST00000397066 ATMQ13315 3056 aa11.24□□□□□ -0.61
CCNF-202ENST00000397066 F6UB75 175 aa11.23□□□□□ -0.61
CCNF-202ENST00000397066 FAM74A4Q5TZK3 123 aa11.23□□□□□ -0.61
CCNF-202ENST00000397066 BAALCQ8WXS3 180 aa11.23□□□□□ -0.61
CCNF-202ENST00000397066 C20orf78Q9BR46 151 aa11.23□□□□□ -0.61
CCNF-202ENST00000397066 SRD5A1P18405 259 aa11.23□□□□□ -0.61
CCNF-202ENST00000397066 OVOL1O14753 267 aa11.23□□□□□ -0.61
CCNF-202ENST00000397066 KIR2DL4Q99706 377 aa11.23□□□□□ -0.61
CCNF-202ENST00000397066 TRBV7-3A0A075B6L6 115 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms